RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 SELENOHQ8IZQ5 122 aaKnown RBP12.53□□□□□ -0.4
SMTN-202ENST00000347557 FAM86C1Q9NVL1 165 aa12.53□□□□□ -0.4
SMTN-202ENST00000347557 ZNF732B4DXR9 585 aa12.53□□□□□ -0.4
SMTN-202ENST00000347557 MRPL33O75394 65 aaKnown RBP12.53□□□□□ -0.4
SMTN-202ENST00000347557 TMEM50AO95807 157 aa12.53□□□□□ -0.4
SMTN-202ENST00000347557 RPL23AP62750 156 aaKnown RBP12.53□□□□□ -0.4
SMTN-202ENST00000347557 ARF1P84077 181 aaKnown RBP12.53□□□□□ -0.4
SMTN-202ENST00000347557 LPAL2Q16609 132 aa12.53□□□□□ -0.4
SMTN-202ENST00000347557 TMEM211Q6ICI0 200 aa12.53□□□□□ -0.4
SMTN-202ENST00000347557 SPINK14Q6IE38 97 aa12.53□□□□□ -0.4
SMTN-202ENST00000347557 C16orf54Q6UWD8 224 aa12.53□□□□□ -0.4
SMTN-202ENST00000347557 IL22RA1Q8N6P7 574 aa12.53□□□□□ -0.4
SMTN-202ENST00000347557 CCDC54Q8NEL0 328 aa12.53□□□□□ -0.4
SMTN-202ENST00000347557 OR2V1Q8NHB1 315 aa12.53□□□□□ -0.4
SMTN-202ENST00000347557 EGLN1Q9GZT9 426 aa12.53□□□□□ -0.4
SMTN-202ENST00000347557 GNG13Q9P2W3 67 aa12.53□□□□□ -0.4
SMTN-202ENST00000347557 SIT1Q9Y3P8 196 aa12.53□□□□□ -0.4
SMTN-202ENST00000347557 DMDP11532 3685 aa12.52□□□□□ -0.4
SMTN-202ENST00000347557 ZFP92A6NM28 416 aa12.52□□□□□ -0.4
SMTN-202ENST00000347557 AP4M1O00189 453 aa12.52□□□□□ -0.4
SMTN-202ENST00000347557 CNOT4O95628 575 aaKnown RBP12.52□□□□□ -0.4
SMTN-202ENST00000347557 PCBD1P61457 104 aa12.52□□□□□ -0.4
SMTN-202ENST00000347557 RHEBQ15382 184 aa12.52□□□□□ -0.4
SMTN-202ENST00000347557 USF2Q15853 346 aaPredicted RBP12.52□□□□□ -0.4
SMTN-202ENST00000347557 ZNF429Q86V71 674 aa12.52□□□□□ -0.4
SMTN-202ENST00000347557 WDR5BQ86VZ2 330 aa12.52□□□□□ -0.4
SMTN-202ENST00000347557 ZNF100Q8IYN0 542 aa12.52□□□□□ -0.4
SMTN-202ENST00000347557 CMTM1Q8IZ96 169 aa12.52□□□□□ -0.4
SMTN-202ENST00000347557 LRTM2Q8N967 370 aa12.52□□□□□ -0.4
SMTN-202ENST00000347557 OR2Y1Q8NGV0 311 aa12.52□□□□□ -0.4
SMTN-202ENST00000347557 SPIN2AQ99865 258 aa12.52□□□□□ -0.4
SMTN-202ENST00000347557 SPIN2BQ9BPZ2 258 aa12.52□□□□□ -0.4
SMTN-202ENST00000347557 SLC25A31Q9H0C2 315 aa12.52□□□□□ -0.4
SMTN-202ENST00000347557 ESPL1Q14674 2120 aa12.52□□□□□ -0.41
SMTN-202ENST00000347557 IAPPP10997 89 aa12.52□□□□□ -0.41
SMTN-202ENST00000347557 OR8G1Q15617 311 aa12.52□□□□□ -0.41
SMTN-202ENST00000347557 LCN15Q6UWW0 184 aa12.52□□□□□ -0.41
SMTN-202ENST00000347557 GGNQ86UU5 652 aa12.52□□□□□ -0.41
SMTN-202ENST00000347557 WDR54Q9H977 334 aa12.52□□□□□ -0.41
SMTN-202ENST00000347557 PRRC2CQ9Y520 2896 aaKnown RBP12.51□□□□□ -0.41
SMTN-202ENST00000347557 LOC102723996A0A087X1L8 192 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 TRAPPC2LH3BP13 241 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 SYNGR1O43759 233 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 NGFP01138 241 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 FGF5P12034 268 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 DLK1P80370 383 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 LFNGQ8NES3 379 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 SF3B5Q9BWJ5 86 aaKnown RBP12.51□□□□□ -0.41
SMTN-202ENST00000347557 PRRG4Q9BZD6 226 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 SMOC1Q9H4F8 434 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 DEPPQ9NTK1 212 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 SLC22A20A6NK97 555 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 RPL36A-HNRNPH2H7BZ11 118 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 SRD5A2P31213 254 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 FGF8P55075 233 aaPredicted RBP12.51□□□□□ -0.41
SMTN-202ENST00000347557 B3GALT5-AS1P59052 145 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 IL11RAQ14626 422 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 C4orf17Q53FE4 359 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 HIST1H2AAQ96QV6 131 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 UNKLQ9H9P5 680 aaKnown RBP12.51□□□□□ -0.41
SMTN-202ENST00000347557 WSB1Q9Y6I7 421 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 PINLYPA6NC86 204 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 CDS2O95674 445 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 IFNA10P01566 189 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 HIST1H1BP16401 226 aaKnown RBP12.51□□□□□ -0.41
SMTN-202ENST00000347557 RAB11AP62491 216 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 SAPCD1Q5SSQ6 148 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 TMEM42Q69YG0 159 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 MAFAQ8NHW3 353 aaPredicted RBP12.51□□□□□ -0.41
SMTN-202ENST00000347557 M1APQ8TC57 530 aa12.51□□□□□ -0.41
SMTN-202ENST00000347557 KIAA2026Q5HYC2 2103 aa12.5□□□□□ -0.41
SMTN-202ENST00000347557 FAM166BA8MTA8 275 aa12.5□□□□□ -0.41
SMTN-202ENST00000347557 SERPINE2P07093 398 aa12.5□□□□□ -0.41
SMTN-202ENST00000347557 PAX6P26367 422 aa12.5□□□□□ -0.41
SMTN-202ENST00000347557 HERPUD1Q15011 391 aa12.5□□□□□ -0.41
SMTN-202ENST00000347557 MPV17LQ2QL34 196 aa12.5□□□□□ -0.41
SMTN-202ENST00000347557 SPATA46Q5T0L3 261 aa12.5□□□□□ -0.41
SMTN-202ENST00000347557 MKXQ8IYA7 352 aa12.5□□□□□ -0.41
SMTN-202ENST00000347557 SGCZQ96LD1 299 aa12.5□□□□□ -0.41
SMTN-202ENST00000347557 RSG1Q9BU20 258 aa12.5□□□□□ -0.41
SMTN-202ENST00000347557 TGIF2-C20orf24A0A0A6YYL0 155 aa12.5□□□□□ -0.41
SMTN-202ENST00000347557 CYB5BO43169 146 aa12.5□□□□□ -0.41
SMTN-202ENST00000347557 RAC2P15153 192 aa12.5□□□□□ -0.41
SMTN-202ENST00000347557 UCP3P55916 312 aa12.5□□□□□ -0.41
SMTN-202ENST00000347557 SPSB3Q6PJ21 355 aa12.5□□□□□ -0.41
SMTN-202ENST00000347557 ATG101Q9BSB4 218 aa12.5□□□□□ -0.41
SMTN-202ENST00000347557 LYRM2Q9NU23 88 aaPredicted RBP12.5□□□□□ -0.41
SMTN-202ENST00000347557 MTCH1Q9NZJ7 389 aa12.5□□□□□ -0.41
SMTN-202ENST00000347557 ERRFI1Q9UJM3 462 aaPredicted RBP12.5□□□□□ -0.41
SMTN-202ENST00000347557 PPP1R3CQ9UQK1 317 aa12.5□□□□□ -0.41
SMTN-202ENST00000347557 PITX3O75364 302 aa12.49□□□□□ -0.41
SMTN-202ENST00000347557 CELA3AP09093 270 aa12.49□□□□□ -0.41
SMTN-202ENST00000347557 MDKP21741 143 aaPredicted RBP12.49□□□□□ -0.41
SMTN-202ENST00000347557 SRPXP78539 464 aa12.49□□□□□ -0.41
SMTN-202ENST00000347557 TNFRSF9Q07011 255 aa12.49□□□□□ -0.41
SMTN-202ENST00000347557 CLEC2AQ6UVW9 174 aa12.49□□□□□ -0.41
SMTN-202ENST00000347557 ASCL4Q6XD76 172 aa12.49□□□□□ -0.41
SMTN-202ENST00000347557 TAAR9Q96RI9 348 aa12.49□□□□□ -0.41
SMTN-202ENST00000347557 NIPSNAP3BQ9BS92 247 aa12.49□□□□□ -0.41
SMTN-202ENST00000347557 Q9N2K0 584 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms