RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 DYNC1I2Q13409 638 aaKnown RBP16.99■□□□□ 0.31
SMARCB1-202ENST00000344921 DEFB112Q30KQ8 113 aa16.99■□□□□ 0.31
SMARCB1-202ENST00000344921 RFESDQ8TAC1 157 aa16.99■□□□□ 0.31
SMARCB1-202ENST00000344921 LGALS14Q8TCE9 139 aa16.99■□□□□ 0.31
SMARCB1-202ENST00000344921 PTX4Q96A99 478 aa16.99■□□□□ 0.31
SMARCB1-202ENST00000344921 TMEM133Q9H2Q1 129 aa16.99■□□□□ 0.31
SMARCB1-202ENST00000344921 MDFIC2A0A1B0GVS7 189 aa16.98■□□□□ 0.31
SMARCB1-202ENST00000344921 FAM172BPA6NC97 362 aa16.98■□□□□ 0.31
SMARCB1-202ENST00000344921 SSTR5P35346 364 aa16.98■□□□□ 0.31
SMARCB1-202ENST00000344921 SAA4P35542 130 aa16.98■□□□□ 0.31
SMARCB1-202ENST00000344921 LTC4SQ16873 150 aa16.98■□□□□ 0.31
SMARCB1-202ENST00000344921 SLC16A12Q6ZSM3 486 aa16.98■□□□□ 0.31
SMARCB1-202ENST00000344921 ARHGAP5-AS1Q96IT6 56 aa16.98■□□□□ 0.31
SMARCB1-202ENST00000344921 ZNF48Q96MX3 618 aaPredicted RBP16.98■□□□□ 0.31
SMARCB1-202ENST00000344921 CHMP1AQ9HD42 196 aaPredicted RBP16.98■□□□□ 0.31
SMARCB1-202ENST00000344921 A0A0U1RQK1 487 aa16.97■□□□□ 0.31
SMARCB1-202ENST00000344921 GABARAPO95166 117 aa16.97■□□□□ 0.31
SMARCB1-202ENST00000344921 ARG1P05089 322 aa16.97■□□□□ 0.31
SMARCB1-202ENST00000344921 TMEM50BP56557 158 aa16.97■□□□□ 0.31
SMARCB1-202ENST00000344921 USP43Q70EL4 1123 aa16.97■□□□□ 0.31
SMARCB1-202ENST00000344921 ARL11Q969Q4 196 aa16.97■□□□□ 0.31
SMARCB1-202ENST00000344921 RAB3CQ96E17 227 aa16.97■□□□□ 0.31
SMARCB1-202ENST00000344921 JMJD8Q96S16 334 aa16.97■□□□□ 0.31
SMARCB1-202ENST00000344921 PECRQ9BY49 303 aa16.97■□□□□ 0.31
SMARCB1-202ENST00000344921 HSF4Q9ULV5 492 aa16.97■□□□□ 0.31
SMARCB1-202ENST00000344921 A0A075B6Q4 140 aa16.96■□□□□ 0.31
SMARCB1-202ENST00000344921 CGB3P0DN86 165 aa16.96■□□□□ 0.31
SMARCB1-202ENST00000344921 CGB7P0DN87 165 aa16.96■□□□□ 0.31
SMARCB1-202ENST00000344921 C6orf183Q5T699 404 aa16.96■□□□□ 0.31
SMARCB1-202ENST00000344921 RTN4RL2Q86UN3 420 aa16.96■□□□□ 0.31
SMARCB1-202ENST00000344921 CLVS1Q8IUQ0 354 aaPredicted RBP16.96■□□□□ 0.31
SMARCB1-202ENST00000344921 PRR18Q8N4B5 295 aa16.96■□□□□ 0.31
SMARCB1-202ENST00000344921 OR10R2Q8NGX6 335 aa16.96■□□□□ 0.31
SMARCB1-202ENST00000344921 CLEC7AQ9BXN2 247 aa16.96■□□□□ 0.31
SMARCB1-202ENST00000344921 IDI2-AS1Q9NZ38 188 aa16.96■□□□□ 0.31
SMARCB1-202ENST00000344921 A0A0A6YYJ9 748 aa16.96■□□□□ 0.3
SMARCB1-202ENST00000344921 IGHV2-26A0A0B4J1V2 119 aa16.96■□□□□ 0.3
SMARCB1-202ENST00000344921 RCC1P18754 421 aaPredicted RBP16.96■□□□□ 0.3
SMARCB1-202ENST00000344921 GDNFP39905 211 aa16.96■□□□□ 0.3
SMARCB1-202ENST00000344921 MRPS15P82914 257 aaKnown RBP16.96■□□□□ 0.3
SMARCB1-202ENST00000344921 SRSF2Q01130 221 aaKnown RBP16.96■□□□□ 0.3
SMARCB1-202ENST00000344921 BAMBIQ13145 260 aa16.96■□□□□ 0.3
SMARCB1-202ENST00000344921 CTF1Q16619 201 aa16.96■□□□□ 0.3
SMARCB1-202ENST00000344921 MOGAT2Q3SYC2 334 aa16.96■□□□□ 0.3
SMARCB1-202ENST00000344921 MIDNQ504T8 468 aa16.96■□□□□ 0.3
SMARCB1-202ENST00000344921 BAIAP2L2Q6UXY1 529 aa16.96■□□□□ 0.3
SMARCB1-202ENST00000344921 ABHD12Q8N2K0 398 aa16.96■□□□□ 0.3
SMARCB1-202ENST00000344921 UBALD1Q8TB05 177 aa16.96■□□□□ 0.3
SMARCB1-202ENST00000344921 SETD6Q8TBK2 473 aa16.96■□□□□ 0.3
SMARCB1-202ENST00000344921 MRPL30Q8TCC3 161 aaKnown RBP16.96■□□□□ 0.3
SMARCB1-202ENST00000344921 KIRREL1Q96J84 757 aa16.96■□□□□ 0.3
SMARCB1-202ENST00000344921 KCNIP1Q9NZI2 227 aa16.96■□□□□ 0.3
SMARCB1-202ENST00000344921 NDUFA13Q9P0J0 144 aa16.96■□□□□ 0.3
SMARCB1-202ENST00000344921 AK3Q9UIJ7 227 aa16.96■□□□□ 0.3
SMARCB1-202ENST00000344921 FOXI3A8MTJ6 420 aaPredicted RBP16.95■□□□□ 0.3
SMARCB1-202ENST00000344921 ORC5O43913 435 aa16.95■□□□□ 0.3
SMARCB1-202ENST00000344921 TMEM127O75204 238 aa16.95■□□□□ 0.3
SMARCB1-202ENST00000344921 FBP1P09467 338 aa16.95■□□□□ 0.3
SMARCB1-202ENST00000344921 SCAND1P57086 179 aa16.95■□□□□ 0.3
SMARCB1-202ENST00000344921 HILS1P60008 231 aa16.95■□□□□ 0.3
SMARCB1-202ENST00000344921 PLAC9Q5JTB6 97 aa16.95■□□□□ 0.3
SMARCB1-202ENST00000344921 GAPTQ8N292 157 aa16.95■□□□□ 0.3
SMARCB1-202ENST00000344921 OR11H6Q8NGC7 330 aa16.95■□□□□ 0.3
SMARCB1-202ENST00000344921 SLC25A46Q96AG3 418 aa16.95■□□□□ 0.3
SMARCB1-202ENST00000344921 PHF21AQ96BD5 680 aa16.95■□□□□ 0.3
SMARCB1-202ENST00000344921 RAB9BQ9NP90 201 aa16.95■□□□□ 0.3
SMARCB1-202ENST00000344921 ETV7Q9Y603 341 aa16.95■□□□□ 0.3
SMARCB1-202ENST00000344921 NPIPB11E5RHQ5 1161 aa16.94■□□□□ 0.3
SMARCB1-202ENST00000344921 SPINT2O43291 252 aa16.94■□□□□ 0.3
SMARCB1-202ENST00000344921 TRAT1Q6PIZ9 186 aa16.94■□□□□ 0.3
SMARCB1-202ENST00000344921 OR5H6Q8NGV6 325 aa16.94■□□□□ 0.3
SMARCB1-202ENST00000344921 ABRACLQ9P1F3 81 aa16.94■□□□□ 0.3
SMARCB1-202ENST00000344921 C12orf77C9JDV5 145 aa16.93■□□□□ 0.3
SMARCB1-202ENST00000344921 RAB27BO00194 218 aa16.93■□□□□ 0.3
SMARCB1-202ENST00000344921 TOR1AO14656 332 aa16.93■□□□□ 0.3
SMARCB1-202ENST00000344921 VENTXO95231 258 aa16.93■□□□□ 0.3
SMARCB1-202ENST00000344921 GNB3P16520 340 aa16.93■□□□□ 0.3
SMARCB1-202ENST00000344921 ZNF626Q68DY1 528 aa16.93■□□□□ 0.3
SMARCB1-202ENST00000344921 DUX5Q96PT3 197 aa16.93■□□□□ 0.3
SMARCB1-202ENST00000344921 CMSS1Q9BQ75 279 aaKnown RBP16.93■□□□□ 0.3
SMARCB1-202ENST00000344921 DCSTAMPQ9H295 470 aa16.93■□□□□ 0.3
SMARCB1-202ENST00000344921 RIMS4Q9H426 269 aaPredicted RBP16.93■□□□□ 0.3
SMARCB1-202ENST00000344921 LINC00574Q9H8X3 128 aa16.93■□□□□ 0.3
SMARCB1-202ENST00000344921 ZMAT3Q9HA38 289 aaKnown RBP16.93■□□□□ 0.3
SMARCB1-202ENST00000344921 TAF9BQ9HBM6 251 aa16.93■□□□□ 0.3
SMARCB1-202ENST00000344921 RHBDL2Q9NX52 303 aa16.93■□□□□ 0.3
SMARCB1-202ENST00000344921 C15orf65H3BRN8 121 aa16.93■□□□□ 0.3
SMARCB1-202ENST00000344921 IGHV3-7P01780 117 aa16.93■□□□□ 0.3
SMARCB1-202ENST00000344921 OR10A7Q8NGE5 316 aa16.93■□□□□ 0.3
SMARCB1-202ENST00000344921 HDHD3Q9BSH5 251 aaPredicted RBP16.93■□□□□ 0.3
SMARCB1-202ENST00000344921 ZNF286AQ9HBT8 521 aa16.93■□□□□ 0.3
SMARCB1-202ENST00000344921 TNFRSF19Q9NS68 423 aa16.93■□□□□ 0.3
SMARCB1-202ENST00000344921 SPATA2Q9UM82 520 aa16.93■□□□□ 0.3
SMARCB1-202ENST00000344921 SDCBPO00560 298 aaPredicted RBP16.92■□□□□ 0.3
SMARCB1-202ENST00000344921 NOL3O60936 208 aaKnown RBP16.92■□□□□ 0.3
SMARCB1-202ENST00000344921 SCGNO76038 276 aa16.92■□□□□ 0.3
SMARCB1-202ENST00000344921 CD3GP09693 182 aa16.92■□□□□ 0.3
SMARCB1-202ENST00000344921 PRRX1P54821 245 aa16.92■□□□□ 0.3
SMARCB1-202ENST00000344921 TUSC1Q2TAM9 212 aa16.92■□□□□ 0.3
SMARCB1-202ENST00000344921 OLFML2AQ68BL7 652 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms