RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 RNF126Q9BV68 326 aa11.21□□□□□ -0.61
COL18A1-201ENST00000342220 RHOFQ9HBH0 211 aa11.21□□□□□ -0.61
COL18A1-201ENST00000342220 IL36RNQ9UBH0 155 aa11.21□□□□□ -0.61
COL18A1-201ENST00000342220 SHPKQ9UHJ6 478 aa11.21□□□□□ -0.61
COL18A1-201ENST00000342220 HIVEP3Q5T1R4 2406 aa11.21□□□□□ -0.61
COL18A1-201ENST00000342220 PTPRBP23467 1997 aa11.21□□□□□ -0.62
COL18A1-201ENST00000342220 FAM90A27PA6NNH2 459 aa11.21□□□□□ -0.62
COL18A1-201ENST00000342220 ANKRD30BLA7E2S9 258 aa11.21□□□□□ -0.62
COL18A1-201ENST00000342220 IFNA10P01566 189 aa11.21□□□□□ -0.62
COL18A1-201ENST00000342220 RAB4AP20338 218 aa11.21□□□□□ -0.62
COL18A1-201ENST00000342220 ID4P47928 161 aa11.21□□□□□ -0.62
COL18A1-201ENST00000342220 NPBWR2P48146 333 aa11.21□□□□□ -0.62
COL18A1-201ENST00000342220 TMEM50BP56557 158 aa11.21□□□□□ -0.62
COL18A1-201ENST00000342220 NHLH2Q02577 135 aa11.21□□□□□ -0.62
COL18A1-201ENST00000342220 PRDX4Q13162 271 aa11.21□□□□□ -0.62
COL18A1-201ENST00000342220 TERB2Q8NHR7 220 aa11.21□□□□□ -0.62
COL18A1-201ENST00000342220 RDH5Q92781 318 aa11.21□□□□□ -0.62
COL18A1-201ENST00000342220 C1orf147Q96MC9 270 aaPredicted RBP11.21□□□□□ -0.62
COL18A1-201ENST00000342220 FAAP24Q9BTP7 215 aa11.21□□□□□ -0.62
COL18A1-201ENST00000342220 C5orf66Q9H5L9 145 aa11.21□□□□□ -0.62
COL18A1-201ENST00000342220 H0YIZ8 118 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 TFF1P04155 84 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 MMP7P09237 267 aaPredicted RBP11.2□□□□□ -0.62
COL18A1-201ENST00000342220 SPNS3Q6ZMD2 512 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 Q6ZS92 163 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 CALHM1Q8IU99 346 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 TMEM230Q96A57 120 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 AKR1E2Q96JD6 320 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 CD300LBA8K4G0 201 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 TIMM8AO60220 97 aaPredicted RBP11.2□□□□□ -0.62
COL18A1-201ENST00000342220 CDC14BO60729 498 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 CD80P33681 288 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 ARR3P36575 388 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 PJVKQ0ZLH3 352 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 MRPL49Q13405 166 aaKnown RBP11.2□□□□□ -0.62
COL18A1-201ENST00000342220 KCNMB1Q16558 191 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 ZNF611Q8N823 705 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 ZSCAN4Q8NAM6 433 aaPredicted RBP11.2□□□□□ -0.62
COL18A1-201ENST00000342220 IGKV3D-15A0A087WSY6 115 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 ZNF724A8MTY0 619 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 PHOX2AO14813 284 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 GEMIN2O14893 280 aaKnown RBP11.2□□□□□ -0.62
COL18A1-201ENST00000342220 SCGNO76038 276 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 IFNA17P01571 189 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 HOXB5P09067 269 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 HIST1H1DP16402 221 aaKnown RBP11.2□□□□□ -0.62
COL18A1-201ENST00000342220 AMY2BP19961 511 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 HOXA5P20719 270 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 CDX1P47902 265 aaPredicted RBP11.2□□□□□ -0.62
COL18A1-201ENST00000342220 FXYD4P59646 89 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 KCNG3Q8TAE7 436 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 SLC25A40Q8TBP6 338 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 MUCL1Q96DR8 90 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 MSRB2Q9Y3D2 182 aa11.2□□□□□ -0.62
COL18A1-201ENST00000342220 MSGN1A6NI15 193 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 PROB1E7EW31 1015 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 EREGO14944 169 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 SFTPBP07988 381 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 CHRM2P08172 466 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 TBPP20226 339 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 CRYGSP22914 178 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 RPS10P46783 165 aaKnown RBP11.19□□□□□ -0.62
COL18A1-201ENST00000342220 TMEM128Q5BJH2 165 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 NSUN5P2Q63ZY6 315 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 CLEC18BQ6UXF7 455 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 CSNK2A3Q8NEV1 391 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 TOMM40LQ969M1 308 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 APOBEC3DQ96AK3 386 aaPredicted RBP11.19□□□□□ -0.62
COL18A1-201ENST00000342220 SYT3Q9BQG1 590 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 MMP26Q9NRE1 261 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 GPR132Q9UNW8 380 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 ST3GAL6Q9Y274 331 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 LRRK2Q5S007 2527 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 TEX13DA0A0J9YY54 714 aaPredicted RBP11.19□□□□□ -0.62
COL18A1-201ENST00000342220 RNASEK-C17orf49H0YIS7 233 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 WNT5AP41221 380 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 TAS2R31P59538 309 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 CNN3Q15417 329 aaKnown RBP11.19□□□□□ -0.62
COL18A1-201ENST00000342220 ZNF826PQ6ZT77 177 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 CYTL1Q9NRR1 136 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 FBLN5Q9UBX5 448 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 GOLT1BQ9Y3E0 138 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 WNK2Q9Y3S1 2297 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 ZNF816-ZNF321PA0A0X1KG74 233 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 AQP7O14520 342 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 KNG1P01042 644 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 TPT1P13693 172 aaKnown RBP11.19□□□□□ -0.62
COL18A1-201ENST00000342220 SULT4A1Q9BR01 284 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 NMES1Q9C002 83 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 OR5AC2Q9NZP5 309 aa11.19□□□□□ -0.62
COL18A1-201ENST00000342220 F8VVB4 439 aa11.18□□□□□ -0.62
COL18A1-201ENST00000342220 F8VWA3 439 aa11.18□□□□□ -0.62
COL18A1-201ENST00000342220 FGF16O43320 207 aa11.18□□□□□ -0.62
COL18A1-201ENST00000342220 GSTP1P09211 210 aaKnown RBP11.18□□□□□ -0.62
COL18A1-201ENST00000342220 MAJINQ3KP22 176 aa11.18□□□□□ -0.62
COL18A1-201ENST00000342220 AWAT1Q58HT5 328 aa11.18□□□□□ -0.62
COL18A1-201ENST00000342220 BAP18Q8IXM2 172 aa11.18□□□□□ -0.62
COL18A1-201ENST00000342220 RNF141Q8WVD5 230 aa11.18□□□□□ -0.62
COL18A1-201ENST00000342220 BCL2L2Q92843 193 aaPredicted RBP11.18□□□□□ -0.62
COL18A1-201ENST00000342220 TMEM45BQ96B21 275 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms