RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 LIME1Q9H400 295 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 SLC2A9Q9NRM0 540 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 SPTAN1Q13813 2472 aaKnown RBP12.83□□□□□ -0.36
TUBB4B-201ENST00000340384 A0A1B0GWJ7 208 aa12.83□□□□□ -0.36
TUBB4B-201ENST00000340384 M0R1B8 84 aa12.83□□□□□ -0.36
TUBB4B-201ENST00000340384 ADAP1O75689 374 aa12.83□□□□□ -0.36
TUBB4B-201ENST00000340384 FABP6P51161 128 aa12.83□□□□□ -0.36
TUBB4B-201ENST00000340384 IGSF11Q5DX21 431 aa12.83□□□□□ -0.36
TUBB4B-201ENST00000340384 LGI3Q8N145 548 aa12.83□□□□□ -0.36
TUBB4B-201ENST00000340384 HES4Q9HCC6 221 aa12.83□□□□□ -0.36
TUBB4B-201ENST00000340384 ZFP57Q9NU63 452 aa12.83□□□□□ -0.36
TUBB4B-201ENST00000340384 MBD2Q9UBB5 411 aa12.83□□□□□ -0.36
TUBB4B-201ENST00000340384 USP9YO00507 2555 aaPredicted RBP12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 ANKHD1Q8IWZ3 2542 aaKnown RBP12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 TRBV6-7A0A0A0MS04 114 aa12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 LINC00862A6NCI5 91 aa12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 DPRXA6NFQ7 191 aa12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 A6NLC8 198 aa12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 H0YL77 283 aa12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 BET1O15155 118 aa12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 MLNRO43193 412 aa12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 BCL2L11O43521 198 aa12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 OR2H2O95918 312 aa12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 HOXB5P09067 269 aa12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 GLRXP35754 106 aa12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 AP2S1P53680 142 aaPredicted RBP12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 RND3P61587 244 aa12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 SMCO1Q147U7 214 aa12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 ESCO2Q56NI9 601 aa12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 PRSS54Q6PEW0 395 aa12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 Q6ZPA2 131 aa12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 WFDC8Q8IUA0 241 aa12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 DMRTC2Q8IXT2 367 aaPredicted RBP12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 LRTM2Q8N967 370 aa12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 SCARB1Q8WTV0 552 aa12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 DCUN1D4Q92564 292 aa12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 GSX2Q9BZM3 304 aa12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 TMEM165Q9HC07 324 aa12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 KIF25Q9UIL4 384 aa12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 KLF2Q9Y5W3 355 aaPredicted RBP12.82□□□□□ -0.36
TUBB4B-201ENST00000340384 A0A1B0GW55 424 aa12.81□□□□□ -0.36
TUBB4B-201ENST00000340384 SIRPB1O00241 398 aa12.81□□□□□ -0.36
TUBB4B-201ENST00000340384 GPR31O00270 319 aa12.81□□□□□ -0.36
TUBB4B-201ENST00000340384 SLC33A1O00400 549 aaPredicted RBP12.81□□□□□ -0.36
TUBB4B-201ENST00000340384 TUSC2O75896 110 aa12.81□□□□□ -0.36
TUBB4B-201ENST00000340384 SCTP09683 121 aa12.81□□□□□ -0.36
TUBB4B-201ENST00000340384 DUX4L2P0CJ85 424 aa12.81□□□□□ -0.36
TUBB4B-201ENST00000340384 DUX4L3P0CJ86 424 aa12.81□□□□□ -0.36
TUBB4B-201ENST00000340384 DUX4L4P0CJ87 422 aa12.81□□□□□ -0.36
TUBB4B-201ENST00000340384 DUX4L5P0CJ88 424 aa12.81□□□□□ -0.36
TUBB4B-201ENST00000340384 DUX4L6P0CJ89 424 aa12.81□□□□□ -0.36
TUBB4B-201ENST00000340384 DUX4L7P0CJ90 424 aa12.81□□□□□ -0.36
TUBB4B-201ENST00000340384 LOXP28300 417 aaPredicted RBP12.81□□□□□ -0.36
TUBB4B-201ENST00000340384 KCNJ3P48549 501 aa12.81□□□□□ -0.36
TUBB4B-201ENST00000340384 SELENOVP59797 346 aa12.81□□□□□ -0.36
TUBB4B-201ENST00000340384 PHLDA2Q53GA4 152 aa12.81□□□□□ -0.36
TUBB4B-201ENST00000340384 LIAT1Q6ZQX7 453 aa12.81□□□□□ -0.36
TUBB4B-201ENST00000340384 OR10J5Q8NHC4 309 aa12.81□□□□□ -0.36
TUBB4B-201ENST00000340384 LRRC46Q96FV0 321 aa12.81□□□□□ -0.36
TUBB4B-201ENST00000340384 KIRREL1Q96J84 757 aa12.81□□□□□ -0.36
TUBB4B-201ENST00000340384 CABLES2Q9BTV7 478 aa12.81□□□□□ -0.36
TUBB4B-201ENST00000340384 DUX4Q9UBX2 424 aa12.81□□□□□ -0.36
TUBB4B-201ENST00000340384 NPIPB11E5RHQ5 1161 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 HAND1O96004 215 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 RLN2P04090 185 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 OR5AC1P0C628 307 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 LYL1P12980 280 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 ZNF250P15622 560 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 TMEM187Q14656 261 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 IAH1Q2TAA2 248 aaPredicted RBP12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 SMIM21Q3B7S5 101 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 ZNF497Q6ZNH5 498 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 CMTM1Q8IZ96 169 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 TAAR3PQ9P1P4 343 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 DNAJB11Q9UBS4 358 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 NDRG3Q9UGV2 375 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 DCHS2Q6V1P9 2916 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 FASNP49327 2511 aaKnown RBP12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 A1L4Q6 167 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 DEFB108AA8MXU0 73 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 CFDP00746 253 aaPredicted RBP12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 IGHV3-13P01766 116 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 LMO1P25800 156 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 CD200P41217 278 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 KLF3P57682 345 aaPredicted RBP12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 ATXN7L3Q14CW9 347 aaPredicted RBP12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 GAPTQ8N292 157 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 OR10Z1Q8NGY1 313 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 SECTM1Q8WVN6 248 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 ARPC5LQ9BPX5 153 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 SLC5A7Q9GZV3 580 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 PRR13Q9NZ81 148 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 KCNIP1Q9NZI2 227 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 TRAPPC2LQ9UL33 140 aa12.8□□□□□ -0.36
TUBB4B-201ENST00000340384 HRNRQ86YZ3 2850 aaPredicted RBP12.79□□□□□ -0.36
TUBB4B-201ENST00000340384 C3orf85A0A1B0GTC6 90 aa12.79□□□□□ -0.36
TUBB4B-201ENST00000340384 TMEM30CPA0ZSE6 113 aa12.79□□□□□ -0.36
TUBB4B-201ENST00000340384 RNF222A6NCQ9 220 aa12.79□□□□□ -0.36
TUBB4B-201ENST00000340384 IFNL4K9M1U5 179 aa12.79□□□□□ -0.36
TUBB4B-201ENST00000340384 MPPED1O15442 326 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms