RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 GLT8D1Q68CQ7 371 aa11.74□□□□□ -0.53
ERCC1-203ENST00000340192 RAB12Q6IQ22 244 aa11.74□□□□□ -0.53
ERCC1-203ENST00000340192 TMEM91Q6ZNR0 172 aa11.74□□□□□ -0.53
ERCC1-203ENST00000340192 OR10A7Q8NGE5 316 aa11.74□□□□□ -0.53
ERCC1-203ENST00000340192 OR2T6Q8NHC8 308 aa11.74□□□□□ -0.53
ERCC1-203ENST00000340192 CCDC107Q8WV48 283 aa11.74□□□□□ -0.53
ERCC1-203ENST00000340192 MMP28Q9H239 520 aa11.74□□□□□ -0.53
ERCC1-203ENST00000340192 GHRLQ9UBU3 117 aa11.74□□□□□ -0.53
ERCC1-203ENST00000340192 PSG11Q9UQ72 335 aa11.74□□□□□ -0.53
ERCC1-203ENST00000340192 PEX16Q9Y5Y5 336 aa11.74□□□□□ -0.53
ERCC1-203ENST00000340192 CMYA5Q8N3K9 4069 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 FAM90A10PA6NDY2 464 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 FAM90A18PA6NE21 464 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 FAM90A16PA6NEW6 464 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 FAM90A20PA6NIJ5 464 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 FAM90A7PA6NKC0 464 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 FAM90A12PA8MX19 464 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 FAM90A5PA8MXJ8 464 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 FAM90A23PA8MXZ1 464 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 J3QR06 171 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 AIPO00170 330 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 MT-ND4P03905 459 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 FAM90A15PP0C7V4 464 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 FAM90A13PP0C7W8 464 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 FAM90A14PP0C7W9 464 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 FAM90A24PP0C7X0 464 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 BRS3P32247 399 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 GNG10P50151 68 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 ARHGDIBP52566 201 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 TRAM1Q15629 374 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 C1orf100Q5SVJ3 147 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 TREML4Q6UXN2 200 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 MGLLQ99685 303 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 CST11Q9H112 138 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 ZNF702PQ9H963 129 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 ETAA1Q9NY74 926 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 BLOC1S6Q9UL45 172 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 MGAM2Q2M2H8 2515 aa11.73□□□□□ -0.53
ERCC1-203ENST00000340192 C15orf65H3BRN8 121 aa11.72□□□□□ -0.53
ERCC1-203ENST00000340192 M0QZ24 198 aa11.72□□□□□ -0.53
ERCC1-203ENST00000340192 TIMM23O14925 209 aa11.72□□□□□ -0.53
ERCC1-203ENST00000340192 MPIG6BO95866 241 aa11.72□□□□□ -0.53
ERCC1-203ENST00000340192 UBBP0CG47 229 aa11.72□□□□□ -0.53
ERCC1-203ENST00000340192 VSIG8P0DPA2 414 aa11.72□□□□□ -0.53
ERCC1-203ENST00000340192 FUT3P21217 361 aa11.72□□□□□ -0.53
ERCC1-203ENST00000340192 PSMA1P25786 263 aaKnown RBP11.72□□□□□ -0.53
ERCC1-203ENST00000340192 HABP2Q14520 560 aaPredicted RBP11.72□□□□□ -0.53
ERCC1-203ENST00000340192 TBCEQ15813 527 aaPredicted RBP11.72□□□□□ -0.53
ERCC1-203ENST00000340192 SIGIRRQ6IA17 410 aa11.72□□□□□ -0.53
ERCC1-203ENST00000340192 C11orf88Q6PI97 169 aa11.72□□□□□ -0.53
ERCC1-203ENST00000340192 SLC16A12Q6ZSM3 486 aa11.72□□□□□ -0.53
ERCC1-203ENST00000340192 Q8N2B8 174 aa11.72□□□□□ -0.53
ERCC1-203ENST00000340192 DTX3Q8N9I9 347 aa11.72□□□□□ -0.53
ERCC1-203ENST00000340192 UBALD1Q8TB05 177 aa11.72□□□□□ -0.53
ERCC1-203ENST00000340192 ARL11Q969Q4 196 aa11.72□□□□□ -0.53
ERCC1-203ENST00000340192 AMMECR1Q9Y4X0 333 aaPredicted RBP11.72□□□□□ -0.53
ERCC1-203ENST00000340192 TET2Q6N021 2002 aaPredicted RBP11.72□□□□□ -0.53
ERCC1-203ENST00000340192 A0A1W2PPE3 182 aa11.71□□□□□ -0.53
ERCC1-203ENST00000340192 UBE2QL1A1L167 161 aa11.71□□□□□ -0.53
ERCC1-203ENST00000340192 OOSP1A8MZH6 123 aa11.71□□□□□ -0.53
ERCC1-203ENST00000340192 H3BUI4 141 aa11.71□□□□□ -0.53
ERCC1-203ENST00000340192 SDCBPO00560 298 aaPredicted RBP11.71□□□□□ -0.53
ERCC1-203ENST00000340192 SLC22A1O15245 554 aa11.71□□□□□ -0.53
ERCC1-203ENST00000340192 ORC5O43913 435 aa11.71□□□□□ -0.53
ERCC1-203ENST00000340192 PDCD6O75340 191 aa11.71□□□□□ -0.53
ERCC1-203ENST00000340192 CD37P11049 281 aa11.71□□□□□ -0.53
ERCC1-203ENST00000340192 HTR2CP28335 458 aa11.71□□□□□ -0.53
ERCC1-203ENST00000340192 BLCAPP62952 87 aa11.71□□□□□ -0.53
ERCC1-203ENST00000340192 FBLN7Q53RD9 439 aa11.71□□□□□ -0.53
ERCC1-203ENST00000340192 SYT6Q5T7P8 510 aaPredicted RBP11.71□□□□□ -0.53
ERCC1-203ENST00000340192 OR10K2Q6IF99 312 aa11.71□□□□□ -0.53
ERCC1-203ENST00000340192 CCDC144NLQ6NUI1 221 aa11.71□□□□□ -0.53
ERCC1-203ENST00000340192 ZNF367Q7RTV3 350 aa11.71□□□□□ -0.53
ERCC1-203ENST00000340192 GAPTQ8N292 157 aa11.71□□□□□ -0.53
ERCC1-203ENST00000340192 KLHDC1Q8N7A1 406 aa11.71□□□□□ -0.53
ERCC1-203ENST00000340192 OR4K15Q8NH41 348 aa11.71□□□□□ -0.53
ERCC1-203ENST00000340192 TOMM40LQ969M1 308 aa11.71□□□□□ -0.53
ERCC1-203ENST00000340192 RPEQ96AT9 228 aa11.71□□□□□ -0.53
ERCC1-203ENST00000340192 CYYR1Q96J86 154 aa11.71□□□□□ -0.53
ERCC1-203ENST00000340192 PRSS22Q9GZN4 317 aa11.71□□□□□ -0.53
ERCC1-203ENST00000340192 KCNK15Q9H427 330 aa11.71□□□□□ -0.53
ERCC1-203ENST00000340192 SERTAD4Q9NUC0 356 aa11.71□□□□□ -0.53
ERCC1-203ENST00000340192 TRAPPC2LQ9UL33 140 aa11.71□□□□□ -0.53
ERCC1-203ENST00000340192 MEGF8Q7Z7M0 2845 aa11.7□□□□□ -0.54
ERCC1-203ENST00000340192 C12orf77C9JDV5 145 aa11.7□□□□□ -0.54
ERCC1-203ENST00000340192 ARL6IP5O75915 188 aa11.7□□□□□ -0.54
ERCC1-203ENST00000340192 GLAP06280 429 aa11.7□□□□□ -0.54
ERCC1-203ENST00000340192 VSIG10L2P0DP72 767 aa11.7□□□□□ -0.54
ERCC1-203ENST00000340192 CALRP27797 417 aaKnown RBP11.7□□□□□ -0.54
ERCC1-203ENST00000340192 MNDAP41218 407 aa11.7□□□□□ -0.54
ERCC1-203ENST00000340192 LOXL3P58215 753 aa11.7□□□□□ -0.54
ERCC1-203ENST00000340192 RPS27AP62979 156 aaKnown RBP11.7□□□□□ -0.54
ERCC1-203ENST00000340192 FABP5Q01469 135 aa11.7□□□□□ -0.54
ERCC1-203ENST00000340192 MADCAM1Q13477 382 aa11.7□□□□□ -0.54
ERCC1-203ENST00000340192 HERPUD1Q15011 391 aa11.7□□□□□ -0.54
ERCC1-203ENST00000340192 Q6ZS46 218 aa11.7□□□□□ -0.54
ERCC1-203ENST00000340192 OR52M1Q8NGK5 317 aa11.7□□□□□ -0.54
ERCC1-203ENST00000340192 OR6M1Q8NGM8 313 aa11.7□□□□□ -0.54
ERCC1-203ENST00000340192 OR10X1Q8NGY0 326 aa11.7□□□□□ -0.54
ERCC1-203ENST00000340192 KCNG3Q8TAE7 436 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms