RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 ZSCAN26Q16670 478 aa11.18□□□□□ -0.62
COMMD4-202ENST00000338995 LHFPL3Q86UP9 236 aa11.18□□□□□ -0.62
COMMD4-202ENST00000338995 IZUMO1Q8IYV9 350 aa11.18□□□□□ -0.62
COMMD4-202ENST00000338995 ARL11Q969Q4 196 aa11.18□□□□□ -0.62
COMMD4-202ENST00000338995 Q96MT0 163 aa11.18□□□□□ -0.62
COMMD4-202ENST00000338995 DUX3Q96PT4 197 aa11.18□□□□□ -0.62
COMMD4-202ENST00000338995 CHCHD6Q9BRQ6 235 aa11.18□□□□□ -0.62
COMMD4-202ENST00000338995 ALG8Q9BVK2 526 aa11.18□□□□□ -0.62
COMMD4-202ENST00000338995 DPCDQ9BVM2 203 aaPredicted RBP11.18□□□□□ -0.62
COMMD4-202ENST00000338995 FAM192AQ9GZU8 254 aa11.18□□□□□ -0.62
COMMD4-202ENST00000338995 METTL9Q9H1A3 318 aa11.18□□□□□ -0.62
COMMD4-202ENST00000338995 ING4Q9UNL4 249 aa11.18□□□□□ -0.62
COMMD4-202ENST00000338995 LSM4Q9Y4Z0 139 aaKnown RBP11.18□□□□□ -0.62
COMMD4-202ENST00000338995 TENM3Q9P273 2699 aa11.18□□□□□ -0.62
COMMD4-202ENST00000338995 COL7A1Q02388 2944 aa11.17□□□□□ -0.62
COMMD4-202ENST00000338995 A0A1W2PPE3 182 aa11.17□□□□□ -0.62
COMMD4-202ENST00000338995 TMEM30CPA0ZSE6 113 aa11.17□□□□□ -0.62
COMMD4-202ENST00000338995 SDCBPO00560 298 aaPredicted RBP11.17□□□□□ -0.62
COMMD4-202ENST00000338995 OR7C1O76099 320 aaPredicted RBP11.17□□□□□ -0.62
COMMD4-202ENST00000338995 RPLP1P05386 114 aaKnown RBP11.17□□□□□ -0.62
COMMD4-202ENST00000338995 VDAC1P21796 283 aa11.17□□□□□ -0.62
COMMD4-202ENST00000338995 INSL3P51460 131 aa11.17□□□□□ -0.62
COMMD4-202ENST00000338995 STX19Q8N4C7 294 aa11.17□□□□□ -0.62
COMMD4-202ENST00000338995 LINC00311Q8N616 119 aa11.17□□□□□ -0.62
COMMD4-202ENST00000338995 C8orf31Q8N9H6 132 aa11.17□□□□□ -0.62
COMMD4-202ENST00000338995 SUMF2Q8NBJ7 301 aa11.17□□□□□ -0.62
COMMD4-202ENST00000338995 Q8NFD4 153 aa11.17□□□□□ -0.62
COMMD4-202ENST00000338995 JAM3Q9BX67 310 aa11.17□□□□□ -0.62
COMMD4-202ENST00000338995 ST3GAL6Q9Y274 331 aa11.17□□□□□ -0.62
COMMD4-202ENST00000338995 IGHV3-72A0A0B4J1Y9 119 aa11.16□□□□□ -0.62
COMMD4-202ENST00000338995 ERICH4A6NGS2 130 aa11.16□□□□□ -0.62
COMMD4-202ENST00000338995 SAC3D1A6NKF1 404 aa11.16□□□□□ -0.62
COMMD4-202ENST00000338995 LINC01548A6NM66 108 aa11.16□□□□□ -0.62
COMMD4-202ENST00000338995 TXNL1O43396 289 aa11.16□□□□□ -0.62
COMMD4-202ENST00000338995 ORC5O43913 435 aa11.16□□□□□ -0.62
COMMD4-202ENST00000338995 ZNF780AO75290 641 aaPredicted RBP11.16□□□□□ -0.62
COMMD4-202ENST00000338995 CIB2O75838 187 aa11.16□□□□□ -0.62
COMMD4-202ENST00000338995 SSTR5P35346 364 aa11.16□□□□□ -0.62
COMMD4-202ENST00000338995 SOX6P35712 828 aa11.16□□□□□ -0.62
COMMD4-202ENST00000338995 REG1BP48304 166 aa11.16□□□□□ -0.62
COMMD4-202ENST00000338995 Q3ZCU0 254 aa11.16□□□□□ -0.62
COMMD4-202ENST00000338995 LPCAT4Q643R3 524 aa11.16□□□□□ -0.62
COMMD4-202ENST00000338995 TMEM65Q6PI78 240 aa11.16□□□□□ -0.62
COMMD4-202ENST00000338995 ASCL4Q6XD76 172 aa11.16□□□□□ -0.62
COMMD4-202ENST00000338995 LINC00596Q86U02 117 aa11.16□□□□□ -0.62
COMMD4-202ENST00000338995 RNF152Q8N8N0 203 aa11.16□□□□□ -0.62
COMMD4-202ENST00000338995 Q8N9W7 124 aa11.16□□□□□ -0.62
COMMD4-202ENST00000338995 PLPPR1Q8TBJ4 325 aa11.16□□□□□ -0.62
COMMD4-202ENST00000338995 NEK7Q8TDX7 302 aa11.16□□□□□ -0.62
COMMD4-202ENST00000338995 LGALS12Q96DT0 336 aa11.16□□□□□ -0.62
COMMD4-202ENST00000338995 PRR25Q96S07 402 aa11.16□□□□□ -0.62
COMMD4-202ENST00000338995 S1PR3Q99500 378 aa11.16□□□□□ -0.62
COMMD4-202ENST00000338995 IFT22Q9H7X7 185 aa11.16□□□□□ -0.62
COMMD4-202ENST00000338995 TRAV39A0A0B4J263 110 aa11.15□□□□□ -0.62
COMMD4-202ENST00000338995 GABRPO00591 440 aa11.15□□□□□ -0.62
COMMD4-202ENST00000338995 LUMP51884 338 aaPredicted RBP11.15□□□□□ -0.62
COMMD4-202ENST00000338995 PPP3R1P63098 170 aa11.15□□□□□ -0.62
COMMD4-202ENST00000338995 PIGYQ3MUY2 71 aa11.15□□□□□ -0.62
COMMD4-202ENST00000338995 ZNF260Q3ZCT1 412 aa11.15□□□□□ -0.62
COMMD4-202ENST00000338995 ATAD3CQ5T2N8 411 aa11.15□□□□□ -0.62
COMMD4-202ENST00000338995 OR10K1Q8NGX5 313 aa11.15□□□□□ -0.62
COMMD4-202ENST00000338995 OR52N1Q8NH53 320 aa11.15□□□□□ -0.62
COMMD4-202ENST00000338995 GPR148Q8TDV2 347 aa11.15□□□□□ -0.62
COMMD4-202ENST00000338995 C4orf3Q8WVX3 66 aa11.15□□□□□ -0.62
COMMD4-202ENST00000338995 RTN4IP1Q8WWV3 396 aaPredicted RBP11.15□□□□□ -0.62
COMMD4-202ENST00000338995 PDCD1LG2Q9BQ51 273 aa11.15□□□□□ -0.62
COMMD4-202ENST00000338995 TMEM138Q9NPI0 162 aa11.15□□□□□ -0.62
COMMD4-202ENST00000338995 ZNF256Q9Y2P7 627 aaPredicted RBP11.15□□□□□ -0.62
COMMD4-202ENST00000338995 SPINT2O43291 252 aa11.14□□□□□ -0.63
COMMD4-202ENST00000338995 LY86O95711 162 aa11.14□□□□□ -0.63
COMMD4-202ENST00000338995 IGHG4P01861 327 aa11.14□□□□□ -0.63
COMMD4-202ENST00000338995 CHATP28329 748 aa11.14□□□□□ -0.63
COMMD4-202ENST00000338995 RAB40BQ12829 278 aa11.14□□□□□ -0.63
COMMD4-202ENST00000338995 GPR176Q14439 515 aa11.14□□□□□ -0.63
COMMD4-202ENST00000338995 MPV17LQ2QL34 196 aa11.14□□□□□ -0.63
COMMD4-202ENST00000338995 DEFB136Q30KP8 78 aa11.14□□□□□ -0.63
COMMD4-202ENST00000338995 TMEM30BQ3MIR4 351 aa11.14□□□□□ -0.63
COMMD4-202ENST00000338995 NHLRC3Q5JS37 347 aa11.14□□□□□ -0.63
COMMD4-202ENST00000338995 Q8N6K4 173 aa11.14□□□□□ -0.63
COMMD4-202ENST00000338995 CCDC107Q8WV48 283 aa11.14□□□□□ -0.63
COMMD4-202ENST00000338995 ASCL2Q99929 193 aa11.14□□□□□ -0.63
COMMD4-202ENST00000338995 ISG20L2Q9H9L3 353 aaKnown RBP11.14□□□□□ -0.63
COMMD4-202ENST00000338995 SPACA1Q9HBV2 294 aa11.14□□□□□ -0.63
COMMD4-202ENST00000338995 ERVK13-1Q9NX77 482 aa11.14□□□□□ -0.63
COMMD4-202ENST00000338995 GFOD1Q9NXC2 390 aa11.14□□□□□ -0.63
COMMD4-202ENST00000338995 IL36GQ9NZH8 169 aa11.14□□□□□ -0.63
COMMD4-202ENST00000338995 GMPPBQ9Y5P6 360 aa11.14□□□□□ -0.63
COMMD4-202ENST00000338995 SMAD5-AS1Q9Y6J3 95 aa11.14□□□□□ -0.63
COMMD4-202ENST00000338995 MCRIP1C9JLW8 97 aa11.13□□□□□ -0.63
COMMD4-202ENST00000338995 CDRT1O95170 752 aa11.13□□□□□ -0.63
COMMD4-202ENST00000338995 MT-ND4P03905 459 aa11.13□□□□□ -0.63
COMMD4-202ENST00000338995 ALPLP05186 524 aa11.13□□□□□ -0.63
COMMD4-202ENST00000338995 OR8U8P0C7N1 319 aa11.13□□□□□ -0.63
COMMD4-202ENST00000338995 GTF2F2P13984 249 aa11.13□□□□□ -0.63
COMMD4-202ENST00000338995 ZNF93P35789 620 aaPredicted RBP11.13□□□□□ -0.63
COMMD4-202ENST00000338995 SOX2P48431 317 aa11.13□□□□□ -0.63
COMMD4-202ENST00000338995 RBM11P57052 281 aaKnown RBP11.13□□□□□ -0.63
COMMD4-202ENST00000338995 ZIK1Q3SY52 487 aaPredicted RBP11.13□□□□□ -0.63
COMMD4-202ENST00000338995 FAM27D1Q5T7N8 215 aa11.13□□□□□ -0.63
COMMD4-202ENST00000338995 STEAP3Q658P3 488 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms