RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 FAM90A13PP0C7W8 464 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 FAM90A14PP0C7W9 464 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 FAM90A24PP0C7X0 464 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 MYL12AP19105 171 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 DCKP27707 260 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 BDKRB2P30411 391 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 PAX5Q02548 391 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 RIPK1Q13546 671 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 GPR176Q14439 515 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 DDI2Q5TDH0 399 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 RSBN1Q5VWQ0 802 aaPredicted RBP8.46□□□□□ -1.06
CAPN3-202ENST00000337571 ZNF529Q6P280 563 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 C10orf99Q6UWK7 81 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 ASCL4Q6XD76 172 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 LINC00596Q86U02 117 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 STX19Q8N4C7 294 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 COMMD1Q8N668 190 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 Q8NFD4 153 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 OR51A2Q8NGJ7 313 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 ARL11Q969Q4 196 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 SLC29A1Q99808 456 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 MCRIP2Q9BUT9 160 aaKnown RBP8.46□□□□□ -1.06
CAPN3-202ENST00000337571 GON7Q9BXV9 100 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 RAB9BQ9NP90 201 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 FGF20Q9NP95 211 aaPredicted RBP8.46□□□□□ -1.06
CAPN3-202ENST00000337571 BABAM2Q9NXR7 383 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 ZMAT5Q9UDW3 170 aaKnown RBP8.46□□□□□ -1.06
CAPN3-202ENST00000337571 TRAV39A0A0B4J263 110 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 A0A1W2PPE3 182 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 A0A1W2PPI3 338 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 MCRIP1C9JLW8 97 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 CCRL2O00421 344 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 SDCBPO00560 298 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-202ENST00000337571 GEMIN2O14893 280 aaKnown RBP8.45□□□□□ -1.06
CAPN3-202ENST00000337571 LIMS3P0CW19 117 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 LIMS4P0CW20 117 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 GTF2F2P13984 249 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 SERPINA2P20848 420 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 IL3RAP26951 378 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 SLC6A1P30531 599 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 SSTR5P35346 364 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 ETV1P50549 477 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 RBM11P57052 281 aaKnown RBP8.45□□□□□ -1.06
CAPN3-202ENST00000337571 MPV17LQ2QL34 196 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 UTF1Q5T230 341 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 UNQ9370/PRO34162Q6UXP9 181 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 SLC35E3Q7Z769 313 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 PQLC1Q8N2U9 271 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 C5orf56Q8N8D9 126 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 OR52M1Q8NGK5 317 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 OR2T10Q8NGZ9 312 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 PLPPR1Q8TBJ4 325 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 CCDC107Q8WV48 283 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 IFT22Q9H7X7 185 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 IL36GQ9NZH8 169 aa8.45□□□□□ -1.06
CAPN3-202ENST00000337571 NKX1-2Q9UD57 310 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-202ENST00000337571 IGHV1-3A0A0C4DH29 117 aa8.44□□□□□ -1.06
CAPN3-202ENST00000337571 HSD17B6O14756 317 aa8.44□□□□□ -1.06
CAPN3-202ENST00000337571 ORC5O43913 435 aa8.44□□□□□ -1.06
CAPN3-202ENST00000337571 ATP6V1G2O95670 118 aa8.44□□□□□ -1.06
CAPN3-202ENST00000337571 RPL23AP62750 156 aaKnown RBP8.44□□□□□ -1.06
CAPN3-202ENST00000337571 ZNF816Q0VGE8 651 aaPredicted RBP8.44□□□□□ -1.06
CAPN3-202ENST00000337571 DIAPH2-AS1Q14236 149 aa8.44□□□□□ -1.06
CAPN3-202ENST00000337571 SMN1Q16637 294 aaKnown RBP8.44□□□□□ -1.06
CAPN3-202ENST00000337571 SLC22A6Q4U2R8 563 aa8.44□□□□□ -1.06
CAPN3-202ENST00000337571 NHLRC3Q5JS37 347 aa8.44□□□□□ -1.06
CAPN3-202ENST00000337571 OR2G6Q5TZ20 316 aa8.44□□□□□ -1.06
CAPN3-202ENST00000337571 MRPL41Q8IXM3 137 aaKnown RBP8.44□□□□□ -1.06
CAPN3-202ENST00000337571 LINC00482Q8N8I6 264 aa8.44□□□□□ -1.06
CAPN3-202ENST00000337571 APH1BQ8WW43 257 aa8.44□□□□□ -1.06
CAPN3-202ENST00000337571 RGP1Q92546 391 aaPredicted RBP8.44□□□□□ -1.06
CAPN3-202ENST00000337571 GHSRQ92847 366 aa8.44□□□□□ -1.06
CAPN3-202ENST00000337571 NOL4LQ96MY1 436 aaPredicted RBP8.44□□□□□ -1.06
CAPN3-202ENST00000337571 RDH12Q96NR8 316 aa8.44□□□□□ -1.06
CAPN3-202ENST00000337571 ZNF184Q99676 751 aaPredicted RBP8.44□□□□□ -1.06
CAPN3-202ENST00000337571 SPACA1Q9HBV2 294 aa8.44□□□□□ -1.06
CAPN3-202ENST00000337571 SMPD3Q9NY59 655 aaPredicted RBP8.44□□□□□ -1.06
CAPN3-202ENST00000337571 LINC00527Q9UJ94 153 aa8.44□□□□□ -1.06
CAPN3-202ENST00000337571 TRAPPC2LQ9UL33 140 aa8.44□□□□□ -1.06
CAPN3-202ENST00000337571 EXOSC1Q9Y3B2 195 aaKnown RBP8.44□□□□□ -1.06
CAPN3-202ENST00000337571 K7EIL1 84 aa8.43□□□□□ -1.06
CAPN3-202ENST00000337571 AIPO00170 330 aa8.43□□□□□ -1.06
CAPN3-202ENST00000337571 AP4M1O00189 453 aa8.43□□□□□ -1.06
CAPN3-202ENST00000337571 OGG1O15527 345 aa8.43□□□□□ -1.06
CAPN3-202ENST00000337571 SPINT2O43291 252 aa8.43□□□□□ -1.06
CAPN3-202ENST00000337571 IGHG2P01859 326 aa8.43□□□□□ -1.06
CAPN3-202ENST00000337571 MT-ND4P03905 459 aa8.43□□□□□ -1.06
CAPN3-202ENST00000337571 HOXD3P31249 432 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-202ENST00000337571 MYCNOSP40205 109 aa8.43□□□□□ -1.06
CAPN3-202ENST00000337571 REG1BP48304 166 aa8.43□□□□□ -1.06
CAPN3-202ENST00000337571 THBS3P49746 956 aa8.43□□□□□ -1.06
CAPN3-202ENST00000337571 YIF1BQ5BJH7 314 aa8.43□□□□□ -1.06
CAPN3-202ENST00000337571 VAX1Q5SQQ9 334 aa8.43□□□□□ -1.06
CAPN3-202ENST00000337571 TEX38Q6PEX7 206 aa8.43□□□□□ -1.06
CAPN3-202ENST00000337571 C8orf86Q6ZUL3 223 aa8.43□□□□□ -1.06
CAPN3-202ENST00000337571 OR2W3Q7Z3T1 314 aa8.43□□□□□ -1.06
CAPN3-202ENST00000337571 TGIF2LXQ8IUE1 241 aa8.43□□□□□ -1.06
CAPN3-202ENST00000337571 ZNF695Q8IW36 515 aa8.43□□□□□ -1.06
CAPN3-202ENST00000337571 C8orf31Q8N9H6 132 aa8.43□□□□□ -1.06
CAPN3-202ENST00000337571 KLHL30-AS1Q8NEE0 82 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms