RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 NCS1P62166 190 aa12.94□□□□□ -0.34
CCDC28A-201ENST00000332797 LTC4SQ16873 150 aa12.94□□□□□ -0.34
CCDC28A-201ENST00000332797 MIDNQ504T8 468 aa12.94□□□□□ -0.34
CCDC28A-201ENST00000332797 IDNKQ5T6J7 187 aa12.94□□□□□ -0.34
CCDC28A-201ENST00000332797 OR52W1Q6IF63 320 aa12.94□□□□□ -0.34
CCDC28A-201ENST00000332797 GPR141Q7Z602 305 aa12.94□□□□□ -0.34
CCDC28A-201ENST00000332797 RFESDQ8TAC1 157 aa12.94□□□□□ -0.34
CCDC28A-201ENST00000332797 LGALS14Q8TCE9 139 aa12.94□□□□□ -0.34
CCDC28A-201ENST00000332797 DUX5Q96PT3 197 aa12.94□□□□□ -0.34
CCDC28A-201ENST00000332797 CLEC7AQ9BXN2 247 aa12.94□□□□□ -0.34
CCDC28A-201ENST00000332797 IDI2-AS1Q9NZ38 188 aa12.94□□□□□ -0.34
CCDC28A-201ENST00000332797 KIAA2026Q5HYC2 2103 aa12.94□□□□□ -0.34
CCDC28A-201ENST00000332797 DNAJC9-AS1A6NH13 148 aa12.93□□□□□ -0.34
CCDC28A-201ENST00000332797 FOXI3A8MTJ6 420 aaPredicted RBP12.93□□□□□ -0.34
CCDC28A-201ENST00000332797 ODF3BA8MYP8 253 aa12.93□□□□□ -0.34
CCDC28A-201ENST00000332797 FBP1P09467 338 aa12.93□□□□□ -0.34
CCDC28A-201ENST00000332797 GZMHP20718 246 aa12.93□□□□□ -0.34
CCDC28A-201ENST00000332797 SERPINB10P48595 397 aa12.93□□□□□ -0.34
CCDC28A-201ENST00000332797 VBP1P61758 197 aa12.93□□□□□ -0.34
CCDC28A-201ENST00000332797 GPR107Q5VW38 600 aa12.93□□□□□ -0.34
CCDC28A-201ENST00000332797 ZNF626Q68DY1 528 aa12.93□□□□□ -0.34
CCDC28A-201ENST00000332797 SLC16A12Q6ZSM3 486 aa12.93□□□□□ -0.34
CCDC28A-201ENST00000332797 GAPTQ8N292 157 aa12.93□□□□□ -0.34
CCDC28A-201ENST00000332797 ZDHHC22Q8N966 263 aa12.93□□□□□ -0.34
CCDC28A-201ENST00000332797 OR11H6Q8NGC7 330 aa12.93□□□□□ -0.34
CCDC28A-201ENST00000332797 UBALD1Q8TB05 177 aa12.93□□□□□ -0.34
CCDC28A-201ENST00000332797 MRPL30Q8TCC3 161 aaKnown RBP12.93□□□□□ -0.34
CCDC28A-201ENST00000332797 C17orf50Q8WW18 174 aa12.93□□□□□ -0.34
CCDC28A-201ENST00000332797 ARL11Q969Q4 196 aa12.93□□□□□ -0.34
CCDC28A-201ENST00000332797 ARHGAP5-AS1Q96IT6 56 aa12.93□□□□□ -0.34
CCDC28A-201ENST00000332797 KIRREL1Q96J84 757 aa12.93□□□□□ -0.34
CCDC28A-201ENST00000332797 NAA50Q9GZZ1 169 aaKnown RBP12.93□□□□□ -0.34
CCDC28A-201ENST00000332797 HOXA3O43365 443 aaPredicted RBP12.92□□□□□ -0.34
CCDC28A-201ENST00000332797 RPS19P39019 145 aaKnown RBP12.92□□□□□ -0.34
CCDC28A-201ENST00000332797 TMEM50BP56557 158 aa12.92□□□□□ -0.34
CCDC28A-201ENST00000332797 FAM189A2Q15884 450 aa12.92□□□□□ -0.34
CCDC28A-201ENST00000332797 KRTAP21-3Q3LHN1 58 aa12.92□□□□□ -0.34
CCDC28A-201ENST00000332797 MOGAT2Q3SYC2 334 aa12.92□□□□□ -0.34
CCDC28A-201ENST00000332797 C6orf183Q5T699 404 aa12.92□□□□□ -0.34
CCDC28A-201ENST00000332797 Q6YL49 198 aa12.92□□□□□ -0.34
CCDC28A-201ENST00000332797 Q6ZTK2 550 aa12.92□□□□□ -0.34
CCDC28A-201ENST00000332797 ANKRD13BQ86YJ7 626 aa12.92□□□□□ -0.34
CCDC28A-201ENST00000332797 ABHD12Q8N2K0 398 aa12.92□□□□□ -0.34
CCDC28A-201ENST00000332797 PTX4Q96A99 478 aa12.92□□□□□ -0.34
CCDC28A-201ENST00000332797 PECRQ9BY49 303 aa12.92□□□□□ -0.34
CCDC28A-201ENST00000332797 ATG5Q9H1Y0 275 aa12.92□□□□□ -0.34
CCDC28A-201ENST00000332797 PRDM13Q9H4Q3 707 aa12.92□□□□□ -0.34
CCDC28A-201ENST00000332797 LINC00574Q9H8X3 128 aa12.92□□□□□ -0.34
CCDC28A-201ENST00000332797 ZNF286AQ9HBT8 521 aa12.92□□□□□ -0.34
CCDC28A-201ENST00000332797 CHMP1AQ9HD42 196 aaPredicted RBP12.92□□□□□ -0.34
CCDC28A-201ENST00000332797 TNFRSF19Q9NS68 423 aa12.92□□□□□ -0.34
CCDC28A-201ENST00000332797 AK3Q9UIJ7 227 aa12.92□□□□□ -0.34
CCDC28A-201ENST00000332797 HSF4Q9ULV5 492 aa12.92□□□□□ -0.34
CCDC28A-201ENST00000332797 FBN1P35555 2871 aaKnown RBP12.92□□□□□ -0.34
CCDC28A-201ENST00000332797 ATRQ13535 2644 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 METTL21EPA6NDL7 271 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 C12orf77C9JDV5 145 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 NPIPB11E5RHQ5 1161 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 C15orf65H3BRN8 121 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 ORC5O43913 435 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 MELTFP08582 738 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 RCC1P18754 421 aaPredicted RBP12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 UBA52P62987 128 aaKnown RBP12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 PLAC9Q5JTB6 97 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 TRAT1Q6PIZ9 186 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 LHFPL4Q7Z7J7 247 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 PRR18Q8N4B5 295 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 OR10R2Q8NGX6 335 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 RAB3CQ96E17 227 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 ZNRD1Q9P1U0 126 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 SCOCQ9UIL1 159 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 A0A075B6Q4 140 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 TRIM77I1YAP6 450 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 SPINT2O43291 252 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 GABARAPO95166 117 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 IGHV3-7P01780 117 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 PAX6P26367 422 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 CD34P28906 385 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 SLC9A3R2Q15599 337 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 UTF1Q5T230 341 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 LDLRAD3Q86YD5 345 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 CROCCP3Q8IVE0 287 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 OR10A7Q8NGE5 316 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 OR5H6Q8NGV6 325 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 NDNFQ8TB73 568 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 SETD6Q8TBK2 473 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 LEAP2Q969E1 77 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 AJUBAQ96IF1 538 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 HDHD3Q9BSH5 251 aaPredicted RBP12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 KCNIP1Q9NZI2 227 aa12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 TBL2Q9Y4P3 447 aaKnown RBP12.91□□□□□ -0.34
CCDC28A-201ENST00000332797 A0A087X0M5 115 aa12.9□□□□□ -0.34
CCDC28A-201ENST00000332797 A0A1B0GX30 115 aa12.9□□□□□ -0.34
CCDC28A-201ENST00000332797 RAB27BO00194 218 aa12.9□□□□□ -0.34
CCDC28A-201ENST00000332797 SDCBPO00560 298 aaPredicted RBP12.9□□□□□ -0.34
CCDC28A-201ENST00000332797 TOR1AO14656 332 aa12.9□□□□□ -0.34
CCDC28A-201ENST00000332797 NAPSAO96009 420 aa12.9□□□□□ -0.34
CCDC28A-201ENST00000332797 IGHV4-59P01825 116 aa12.9□□□□□ -0.34
CCDC28A-201ENST00000332797 HBZP02008 142 aa12.9□□□□□ -0.34
CCDC28A-201ENST00000332797 CTF1Q16619 201 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms