RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 E5RGE8 158 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 OR7C1O76099 320 aaPredicted RBP13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 IGKV1D-12P01611 117 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 SRP19P09132 144 aaKnown RBP13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 USF2Q15853 346 aaPredicted RBP13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 ZNF429Q86V71 674 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 CYB561D1Q8N8Q1 229 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 RNASE11Q8TAA1 199 aaKnown RBP13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 CPT1CQ8TCG5 803 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 ADGRG7Q96K78 797 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 PACRGQ96M98 296 aaPredicted RBP13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 HIST1H2BLQ99880 126 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 BCO1Q9HAY6 547 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 AK3Q9UIJ7 227 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 NSG2Q9Y328 171 aa13.38□□□□□ -0.27
SHROOM1-201ENST00000319854 IFNA21P01568 189 aa13.37□□□□□ -0.27
SHROOM1-201ENST00000319854 HIST1H3AP68431 136 aa13.37□□□□□ -0.27
SHROOM1-201ENST00000319854 OR8G1Q15617 311 aa13.37□□□□□ -0.27
SHROOM1-201ENST00000319854 HIST2H3PS2Q5TEC6 136 aa13.37□□□□□ -0.27
SHROOM1-201ENST00000319854 SGPP2Q8IWX5 399 aa13.37□□□□□ -0.27
SHROOM1-201ENST00000319854 CRIM1Q9NZV1 1036 aa13.37□□□□□ -0.27
SHROOM1-201ENST00000319854 PIEZO2Q9H5I5 2752 aa13.37□□□□□ -0.27
SHROOM1-201ENST00000319854 PTBP3O95758 552 aaKnown RBP13.37□□□□□ -0.27
SHROOM1-201ENST00000319854 IGLV3-1P01715 115 aa13.37□□□□□ -0.27
SHROOM1-201ENST00000319854 CD59P13987 128 aa13.37□□□□□ -0.27
SHROOM1-201ENST00000319854 NPBWR2P48146 333 aa13.37□□□□□ -0.27
SHROOM1-201ENST00000319854 GFRA1P56159 465 aa13.37□□□□□ -0.27
SHROOM1-201ENST00000319854 PHLDA2Q53GA4 152 aa13.37□□□□□ -0.27
SHROOM1-201ENST00000319854 ALKBH2Q6NS38 261 aa13.37□□□□□ -0.27
SHROOM1-201ENST00000319854 SLC25A26Q70HW3 274 aa13.37□□□□□ -0.27
SHROOM1-201ENST00000319854 CALHM1Q8IU99 346 aa13.37□□□□□ -0.27
SHROOM1-201ENST00000319854 ST3GAL6Q9Y274 331 aa13.37□□□□□ -0.27
SHROOM1-201ENST00000319854 STRAPQ9Y3F4 350 aaKnown RBP13.37□□□□□ -0.27
SHROOM1-201ENST00000319854 CRYM-AS1A6NIL9 109 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 CDX4O14627 284 aaPredicted RBP13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 MSTNO14793 375 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 CST2P09228 141 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 PGA5P0DJD9 388 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 OR5H8P0DN80 308 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 FAM89BQ8N5H3 189 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 KIAA1549Q9HCM3 1950 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 A0A1W2PR80 420 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 ZNF503-AS2A6NEH8 195 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 GPR137BO60478 399 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 IFNA10P01566 189 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 EDN3P14138 238 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 APLNRP35414 380 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 NOVA1P51513 510 aaKnown RBP13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 HES3Q5TGS1 186 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 FOXL2NBQ6ZUU3 175 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 ZNF664Q8N3J9 261 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 TMEM68Q96MH6 324 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 GPHA2Q96T91 129 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 TTTY12Q9BZ98 90 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 SLC25A31Q9H0C2 315 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 KCNIP3Q9Y2W7 256 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 A0A1B0GW64 132 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 A8MWP6 167 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 SLC33A1O00400 549 aaPredicted RBP13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 MT-CO3P00414 261 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 TAS2R46P59540 309 aa13.36□□□□□ -0.27
SHROOM1-201ENST00000319854 CACNA1DQ01668 2161 aa13.35□□□□□ -0.27
SHROOM1-201ENST00000319854 NGFP01138 241 aa13.35□□□□□ -0.27
SHROOM1-201ENST00000319854 OR5AC1P0C628 307 aa13.35□□□□□ -0.27
SHROOM1-201ENST00000319854 TMEM251Q8N6I4 163 aa13.35□□□□□ -0.27
SHROOM1-201ENST00000319854 SNX22Q96L94 193 aa13.35□□□□□ -0.27
SHROOM1-201ENST00000319854 Q96M66 194 aa13.35□□□□□ -0.27
SHROOM1-201ENST00000319854 ZNF442Q9H7R0 627 aa13.35□□□□□ -0.27
SHROOM1-201ENST00000319854 ZNF703Q9H7S9 590 aaPredicted RBP13.35□□□□□ -0.27
SHROOM1-201ENST00000319854 A0A087WWC5 75 aa13.35□□□□□ -0.27
SHROOM1-201ENST00000319854 OR6C6A6NF89 314 aa13.35□□□□□ -0.27
SHROOM1-201ENST00000319854 GLIPR1P48060 266 aa13.35□□□□□ -0.27
SHROOM1-201ENST00000319854 SPATA46Q5T0L3 261 aa13.35□□□□□ -0.27
SHROOM1-201ENST00000319854 OR56B2PQ8NGI1 322 aa13.35□□□□□ -0.27
SHROOM1-201ENST00000319854 FAM173AQ9BQD7 235 aa13.35□□□□□ -0.27
SHROOM1-201ENST00000319854 IL36RNQ9UBH0 155 aa13.35□□□□□ -0.27
SHROOM1-201ENST00000319854 DIDO1Q9BTC0 2240 aaKnown RBP13.35□□□□□ -0.27
SHROOM1-201ENST00000319854 KIAA2026Q5HYC2 2103 aa13.35□□□□□ -0.27
SHROOM1-201ENST00000319854 ELOA3CA0A087WX78 387 aaPredicted RBP13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 FOXI3A8MTJ6 420 aaPredicted RBP13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 COX5BP10606 129 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 GPM6AP51674 278 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 PIGPP57054 158 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 ICAM4Q14773 271 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 CNN3Q15417 329 aaKnown RBP13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 ABLIM2Q6H8Q1 611 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 DPPA2Q7Z7J5 298 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 OR2G3Q8NGZ4 309 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 SLC7A11Q9UPY5 501 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 SERPINE3A8MV23 424 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 EREGO14944 169 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 CYTIPO60759 359 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 LHX2P50458 406 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 ZNF133P52736 654 aaPredicted RBP13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 SRSF6Q13247 344 aaKnown RBP13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 AKR1C8PQ5T2L2 129 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 SLC22A25Q6T423 547 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 C17orf78Q8N4C9 275 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 HS3ST6Q96QI5 342 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms