RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 PKD1L1Q8TDX9 2849 aa12.92□□□□□ -0.34
HDDC2-201ENST00000318787 IGHV3-43A0A0B4J1X8 118 aa12.92□□□□□ -0.34
HDDC2-201ENST00000318787 UBE2QL1A1L167 161 aa12.92□□□□□ -0.34
HDDC2-201ENST00000318787 MEGF11A6BM72 1044 aa12.92□□□□□ -0.34
HDDC2-201ENST00000318787 SDCBPO00560 298 aaPredicted RBP12.92□□□□□ -0.34
HDDC2-201ENST00000318787 MPIG6BO95866 241 aa12.92□□□□□ -0.34
HDDC2-201ENST00000318787 IGHV3-43DP0DP04 118 aa12.92□□□□□ -0.34
HDDC2-201ENST00000318787 CRHBPP24387 322 aa12.92□□□□□ -0.34
HDDC2-201ENST00000318787 MNDAP41218 407 aa12.92□□□□□ -0.34
HDDC2-201ENST00000318787 EFNB2P52799 333 aa12.92□□□□□ -0.34
HDDC2-201ENST00000318787 RPS25P62851 125 aaKnown RBP12.92□□□□□ -0.34
HDDC2-201ENST00000318787 IRF3Q14653 427 aa12.92□□□□□ -0.34
HDDC2-201ENST00000318787 TPTE2P1Q5T6R2 138 aa12.92□□□□□ -0.34
HDDC2-201ENST00000318787 GLT8D1Q68CQ7 371 aa12.92□□□□□ -0.34
HDDC2-201ENST00000318787 CDH26Q8IXH8 852 aa12.92□□□□□ -0.34
HDDC2-201ENST00000318787 OR10X1Q8NGY0 326 aa12.92□□□□□ -0.34
HDDC2-201ENST00000318787 CREB3L1Q96BA8 519 aa12.92□□□□□ -0.34
HDDC2-201ENST00000318787 UQCC2Q9BRT2 126 aa12.92□□□□□ -0.34
HDDC2-201ENST00000318787 PRSS22Q9GZN4 317 aa12.92□□□□□ -0.34
HDDC2-201ENST00000318787 CST11Q9H112 138 aa12.92□□□□□ -0.34
HDDC2-201ENST00000318787 KCNK15Q9H427 330 aa12.92□□□□□ -0.34
HDDC2-201ENST00000318787 DUSP21Q9H596 190 aa12.92□□□□□ -0.34
HDDC2-201ENST00000318787 ZNF702PQ9H963 129 aa12.92□□□□□ -0.34
HDDC2-201ENST00000318787 SPACA1Q9HBV2 294 aa12.92□□□□□ -0.34
HDDC2-201ENST00000318787 J3QR06 171 aa12.91□□□□□ -0.34
HDDC2-201ENST00000318787 CGB3P0DN86 165 aa12.91□□□□□ -0.34
HDDC2-201ENST00000318787 CGB7P0DN87 165 aa12.91□□□□□ -0.34
HDDC2-201ENST00000318787 SRMP19623 302 aa12.91□□□□□ -0.34
HDDC2-201ENST00000318787 DYNLT3P51808 116 aa12.91□□□□□ -0.34
HDDC2-201ENST00000318787 SYT6Q5T7P8 510 aaPredicted RBP12.91□□□□□ -0.34
HDDC2-201ENST00000318787 OR10K2Q6IF99 312 aa12.91□□□□□ -0.34
HDDC2-201ENST00000318787 MRPS24Q96EL2 167 aaKnown RBP12.91□□□□□ -0.34
HDDC2-201ENST00000318787 NCOR1P1Q9H4R4 102 aa12.91□□□□□ -0.34
HDDC2-201ENST00000318787 BLOC1S6Q9UL45 172 aa12.91□□□□□ -0.34
HDDC2-201ENST00000318787 PSG11Q9UQ72 335 aa12.91□□□□□ -0.34
HDDC2-201ENST00000318787 A0A087X0M5 115 aa12.9□□□□□ -0.34
HDDC2-201ENST00000318787 A0A1B0GX30 115 aa12.9□□□□□ -0.34
HDDC2-201ENST00000318787 GZMHP20718 246 aa12.9□□□□□ -0.34
HDDC2-201ENST00000318787 GP2P55259 537 aaKnown RBP12.9□□□□□ -0.34
HDDC2-201ENST00000318787 BLCAPP62952 87 aa12.9□□□□□ -0.34
HDDC2-201ENST00000318787 HES1Q14469 280 aa12.9□□□□□ -0.34
HDDC2-201ENST00000318787 HERPUD1Q15011 391 aa12.9□□□□□ -0.34
HDDC2-201ENST00000318787 TMEM95Q3KNT9 176 aa12.9□□□□□ -0.34
HDDC2-201ENST00000318787 CCDC144NLQ6NUI1 221 aa12.9□□□□□ -0.34
HDDC2-201ENST00000318787 UNQ9370/PRO34162Q6UXP9 181 aa12.9□□□□□ -0.34
HDDC2-201ENST00000318787 ZNF497Q6ZNH5 498 aa12.9□□□□□ -0.34
HDDC2-201ENST00000318787 PRSS48Q7RTY5 328 aa12.9□□□□□ -0.34
HDDC2-201ENST00000318787 LRRTM1Q86UE6 522 aa12.9□□□□□ -0.34
HDDC2-201ENST00000318787 LYG1Q8N1E2 194 aa12.9□□□□□ -0.34
HDDC2-201ENST00000318787 DTX3Q8N9I9 347 aa12.9□□□□□ -0.34
HDDC2-201ENST00000318787 FAM110DQ8TAY7 271 aaPredicted RBP12.9□□□□□ -0.34
HDDC2-201ENST00000318787 SLC25A33Q9BSK2 321 aa12.9□□□□□ -0.34
HDDC2-201ENST00000318787 PLGRKTQ9HBL7 147 aa12.9□□□□□ -0.34
HDDC2-201ENST00000318787 NPIPB11E5RHQ5 1161 aa12.89□□□□□ -0.35
HDDC2-201ENST00000318787 TSPAN15O95858 294 aa12.89□□□□□ -0.35
HDDC2-201ENST00000318787 MT-ND4P03905 459 aa12.89□□□□□ -0.35
HDDC2-201ENST00000318787 HTR2CP28335 458 aa12.89□□□□□ -0.35
HDDC2-201ENST00000318787 VDAC2P45880 294 aaPredicted RBP12.89□□□□□ -0.35
HDDC2-201ENST00000318787 PAX5Q02548 391 aa12.89□□□□□ -0.35
HDDC2-201ENST00000318787 MLLT11Q13015 90 aaPredicted RBP12.89□□□□□ -0.35
HDDC2-201ENST00000318787 MADCAM1Q13477 382 aa12.89□□□□□ -0.35
HDDC2-201ENST00000318787 C9orf152Q5JTZ5 239 aa12.89□□□□□ -0.35
HDDC2-201ENST00000318787 FAM53AQ6NSI3 398 aaPredicted RBP12.89□□□□□ -0.35
HDDC2-201ENST00000318787 C11orf88Q6PI97 169 aa12.89□□□□□ -0.35
HDDC2-201ENST00000318787 Q6ZS46 218 aa12.89□□□□□ -0.35
HDDC2-201ENST00000318787 OR56B4Q8NH76 319 aa12.89□□□□□ -0.35
HDDC2-201ENST00000318787 PHYHIPQ92561 330 aa12.89□□□□□ -0.35
HDDC2-201ENST00000318787 CYYR1Q96J86 154 aa12.89□□□□□ -0.35
HDDC2-201ENST00000318787 AKR1E2Q96JD6 320 aa12.89□□□□□ -0.35
HDDC2-201ENST00000318787 Q96M66 194 aa12.89□□□□□ -0.35
HDDC2-201ENST00000318787 MGLLQ99685 303 aa12.89□□□□□ -0.35
HDDC2-201ENST00000318787 TMEM59Q9BXS4 323 aa12.89□□□□□ -0.35
HDDC2-201ENST00000318787 RCC2Q9P258 522 aaKnown RBP12.89□□□□□ -0.35
HDDC2-201ENST00000318787 RAB26Q9ULW5 256 aa12.89□□□□□ -0.35
HDDC2-201ENST00000318787 SH2D7A6NKC9 451 aaPredicted RBP12.88□□□□□ -0.35
HDDC2-201ENST00000318787 SPINT2O43291 252 aa12.88□□□□□ -0.35
HDDC2-201ENST00000318787 UCHL1P09936 223 aa12.88□□□□□ -0.35
HDDC2-201ENST00000318787 UBBP0CG47 229 aa12.88□□□□□ -0.35
HDDC2-201ENST00000318787 FUT3P21217 361 aa12.88□□□□□ -0.35
HDDC2-201ENST00000318787 REG1BP48304 166 aa12.88□□□□□ -0.35
HDDC2-201ENST00000318787 DIAPH2-AS1Q14236 149 aa12.88□□□□□ -0.35
HDDC2-201ENST00000318787 P2RY14Q15391 338 aa12.88□□□□□ -0.35
HDDC2-201ENST00000318787 C2orf68Q2NKX9 166 aa12.88□□□□□ -0.35
HDDC2-201ENST00000318787 ABCA11PQ4W5N1 156 aa12.88□□□□□ -0.35
HDDC2-201ENST00000318787 FBLN7Q53RD9 439 aa12.88□□□□□ -0.35
HDDC2-201ENST00000318787 LYPD6Q86Y78 171 aa12.88□□□□□ -0.35
HDDC2-201ENST00000318787 OR10V1Q8NGI7 309 aa12.88□□□□□ -0.35
HDDC2-201ENST00000318787 NEDD4LQ96PU5 975 aa12.88□□□□□ -0.35
HDDC2-201ENST00000318787 GNG12Q9UBI6 72 aa12.88□□□□□ -0.35
HDDC2-201ENST00000318787 GHRLQ9UBU3 117 aa12.88□□□□□ -0.35
HDDC2-201ENST00000318787 AK6Q9Y3D8 172 aaKnown RBP12.88□□□□□ -0.35
HDDC2-201ENST00000318787 FAM90A10PA6NDY2 464 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 FAM90A18PA6NE21 464 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 FAM90A16PA6NEW6 464 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 FAM90A20PA6NIJ5 464 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 FAM90A7PA6NKC0 464 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 FAM90A22PA8MWA6 464 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 FAM90A12PA8MX19 464 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 FAM90A5PA8MXJ8 464 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 FAM90A23PA8MXZ1 464 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms