RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 NUDCD2Q8WVJ2 157 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 PINX1Q96BK5 328 aaKnown RBP7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 TMEM147Q9BVK8 224 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 LPAR5Q9H1C0 372 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 MDFIC2A0A1B0GVS7 189 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 ATP6V1G2-DDX39BF2Z307 99 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 WISP1O95388 367 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 IGHV1-2P23083 117 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 KIR2DL2P43627 348 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 BLOC1S1P78537 153 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 ZNF616Q08AN1 781 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 SLC9A3R2Q15599 337 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 SLC25A38Q96DW6 304 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 ZNF2Q9BSG1 426 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 A0A1W2PRD5 423 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 A0A1W2PRF3 423 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 A0A1W2PRM7 423 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 GPR31O00270 319 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 RBM11P57052 281 aaKnown RBP7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 KLF9Q13886 244 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 PHLDA2Q53GA4 152 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 ARHGAP5-AS1Q96IT6 56 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 OR2J1Q9GZK6 312 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 STRAPQ9Y3F4 350 aaKnown RBP7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 PIEZO1Q92508 2521 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 A0A0B4J2A0 478 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 MC5RP33032 325 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 ACSM6Q6P461 480 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 ZNF767PQ75MW2 155 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 CENPVQ7Z7K6 275 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 DPCDQ9BVM2 203 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 SHPKQ9UHJ6 478 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 RPH3ALQ9UNE2 315 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 EML5Q05BV3 1969 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 SVILO95425 2214 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 OR5H14A6NHG9 310 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 IQCF6A8MYZ5 107 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 MGST3O14880 152 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 MAGEB1P43366 347 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 TMEM128Q5BJH2 165 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 SOSTQ9BQB4 213 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 PNRC2Q9NPJ4 139 aaKnown RBP7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 SLC35D1Q9NTN3 355 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 MAB21L2Q9Y586 359 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 PPIAL4CA0A0B4J2A2 164 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 FBP1P09467 338 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 PPIAL4GP0DN37 164 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 ZBTB34Q8NCN2 500 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 AAMDCQ9H7C9 122 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 TPRP12270 2363 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 K7EPK0 472 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 FABP7O15540 132 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 SRSF10O75494 262 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 ZNF260Q3ZCT1 412 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 COLCA1Q6ZS62 124 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 FAM71E2Q8N5Q1 922 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 ITLN1Q8WWA0 313 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 PSG11Q9UQ72 335 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 DNAJC13O75165 2243 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 APC2O95996 2303 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 GNB3P16520 340 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 CEACAM8P31997 349 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 TNXAQ16473 311 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 OR10P1Q8NGE3 313 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 MARVELD3Q96A59 401 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 TXN2Q99757 166 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 SSBP3Q9BWW4 388 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 SERTAD4Q9NUC0 356 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 KLK11Q9UBX7 282 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 RALYQ9UKM9 306 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 PRR32B1ATL7 298 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 COX7A2P2O60397 106 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 ZG16O60844 167 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 RBP4P02753 201 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 FCGR2CP31995 323 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 PRDX2P32119 198 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 SORDQ00796 357 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 TMEM42Q69YG0 159 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 CELF2-AS1Q8N7Q2 184 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 AQP3Q92482 292 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 SNX22Q96L94 193 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 ANXA10Q9UJ72 324 aa7.34□□□□□ -1.23
PDLIM5-201ENST00000317968 NKX2-6A6NCS4 301 aa7.34□□□□□ -1.24
PDLIM5-201ENST00000317968 CDIPTO14735 213 aa7.34□□□□□ -1.24
PDLIM5-201ENST00000317968 TPT1P13693 172 aaKnown RBP7.34□□□□□ -1.24
PDLIM5-201ENST00000317968 GLDNQ6ZMI3 551 aaPredicted RBP7.34□□□□□ -1.24
PDLIM5-201ENST00000317968 RTN4RL2Q86UN3 420 aa7.34□□□□□ -1.24
PDLIM5-201ENST00000317968 FAM216AQ8WUB2 273 aa7.34□□□□□ -1.24
PDLIM5-201ENST00000317968 OR5P3Q8WZ94 311 aa7.34□□□□□ -1.24
PDLIM5-201ENST00000317968 Q96M66 194 aa7.34□□□□□ -1.24
PDLIM5-201ENST00000317968 AUP1Q9Y679 476 aa7.34□□□□□ -1.24
PDLIM5-201ENST00000317968 FREM3P0C091 2139 aa7.34□□□□□ -1.24
PDLIM5-201ENST00000317968 A0A0D9SG52 128 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 GYPAP02724 150 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 BSPH1Q075Z2 132 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 SNAI3Q3KNW1 292 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 NHLRC3Q5JS37 347 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 VWA1Q6PCB0 445 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 IL34Q6ZMJ4 242 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 RFPL4BQ6ZWI9 263 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms