RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 HIST2H3PS2Q5TEC6 136 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 OR8G2PQ6IF36 304 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 TIPARPQ7Z3E1 657 aaKnown RBP9.05□□□□□ -0.96
COL3A1-202ENST00000317840 RBMXL1Q96E39 390 aaKnown RBP9.05□□□□□ -0.96
COL3A1-202ENST00000317840 IL36RNQ9UBH0 155 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 PIEZO2Q9H5I5 2752 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 A0A0G2JMM0 328 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 A0A1W2PPB8 328 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 A0A1W2PR80 420 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 A0A1W2PRS3 328 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 ANKRD30BLA7E2S9 258 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 KIR3DP1A8MWS1 328 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 HMGB3O15347 200 aaKnown RBP9.05□□□□□ -0.96
COL3A1-202ENST00000317840 DFFBO76075 338 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 FOLR2P14207 255 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 CD46P15529 392 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 AGAP20933 346 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 DEFA6Q01524 100 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 TESK1Q15569 626 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 ZNF787Q6DD87 383 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 OR2T2Q6IF00 324 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 ZDHHC23Q8IYP9 409 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 SF3B5Q9BWJ5 86 aaKnown RBP9.05□□□□□ -0.96
COL3A1-202ENST00000317840 WNT5BQ9H1J7 359 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 RNF122Q9H9V4 155 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 KIAA1456Q9P272 454 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 ZMAT5Q9UDW3 170 aaKnown RBP9.05□□□□□ -0.96
COL3A1-202ENST00000317840 OR14J1Q9UGF5 321 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 COL6A3P12111 3177 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 EML6Q6ZMW3 1958 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 BTBD17A6NE02 478 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 RFPL3SP0C7P2 107 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 CRYGSP22914 178 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 SRD5A2P31213 254 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 SSPNQ14714 243 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 DEFB109BQ30KR1 87 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 GPR35Q9HC97 309 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 ZNF391Q9UJN7 358 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 FOXD3Q9UJU5 478 aaPredicted RBP9.05□□□□□ -0.96
COL3A1-202ENST00000317840 AKAP6Q13023 2319 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 ZNF587BE7ETH6 402 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 TUSC2O75896 110 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 UMODP07911 640 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 OR8U8P0C7N1 319 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 EDN3P14138 238 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 HOXC12P31275 282 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 EIF3IQ13347 325 aaKnown RBP9.05□□□□□ -0.96
COL3A1-202ENST00000317840 MRPL14Q6P1L8 145 aaKnown RBP9.05□□□□□ -0.96
COL3A1-202ENST00000317840 GCNT2Q8N0V5 402 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 RSG1Q9BU20 258 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 OR51M1Q9H341 326 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 DOK5Q9P104 306 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 TRAPPC2LQ9UL33 140 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 ZDHHC8Q9ULC8 765 aa9.05□□□□□ -0.96
COL3A1-202ENST00000317840 ADAMTS9Q9P2N4 1935 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 RPL36A-HNRNPH2H7BZ11 118 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 K7N7A8 449 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 PITX3O75364 302 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 COX6A1P12074 109 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 MDKP21741 143 aaPredicted RBP9.04□□□□□ -0.96
COL3A1-202ENST00000317840 ADIRFQ15847 76 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 OR2B11Q5JQS5 317 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 SPATA46Q5T0L3 261 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 CRIP3Q6Q6R5 217 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 NECAP1Q8NC96 275 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 TMEM171Q8WVE6 324 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 KCNE4Q8WWG9 221 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 FER1L6-AS2Q96M78 137 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 IER2Q9BTL4 223 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 TUBA4BQ9H853 241 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 LYRM2Q9NU23 88 aaPredicted RBP9.04□□□□□ -0.96
COL3A1-202ENST00000317840 CACNG5Q9UF02 275 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 hCG_38984A0A1B0GV85 526 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 LY86O95711 162 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 SELENOHQ8IZQ5 122 aaKnown RBP9.04□□□□□ -0.96
COL3A1-202ENST00000317840 OTOGLQ3ZCN5 2332 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 TGIF2-C20orf24A0A0A6YYL0 155 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 IGKV1D-13A0A0B4J2D9 117 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 CLDN1O95832 211 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 TRGC2P03986 189 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 CTXN2P0C2S0 81 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 IGKV1-13P0DP09 117 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 CD200P41217 278 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 MAGEA5P43359 124 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 CTAG1AP78358 180 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 CABLES2Q9BTV7 478 aa9.04□□□□□ -0.96
COL3A1-202ENST00000317840 SPTBN1Q01082 2364 aaKnown RBP9.04□□□□□ -0.96
COL3A1-202ENST00000317840 PKDREJQ9NTG1 2253 aa9.03□□□□□ -0.96
COL3A1-202ENST00000317840 DOCK10Q96BY6 2186 aa9.03□□□□□ -0.96
COL3A1-202ENST00000317840 C3orf80F5H4A9 247 aa9.03□□□□□ -0.96
COL3A1-202ENST00000317840 SCAF4O95104 1147 aaKnown RBP9.03□□□□□ -0.96
COL3A1-202ENST00000317840 IGLV3-1P01715 115 aa9.03□□□□□ -0.96
COL3A1-202ENST00000317840 SERPINA7P05543 415 aa9.03□□□□□ -0.96
COL3A1-202ENST00000317840 FABP4P15090 132 aa9.03□□□□□ -0.96
COL3A1-202ENST00000317840 UCP3P55916 312 aa9.03□□□□□ -0.96
COL3A1-202ENST00000317840 HLA-DRB3P79483 266 aa9.03□□□□□ -0.96
COL3A1-202ENST00000317840 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.03□□□□□ -0.96
COL3A1-202ENST00000317840 C1orf87Q8N0U7 546 aa9.03□□□□□ -0.96
COL3A1-202ENST00000317840 LRTM2Q8N967 370 aa9.03□□□□□ -0.96
COL3A1-202ENST00000317840 GGACTQ9BVM4 153 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms