RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 QRFPP83859 136 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 HERPUD1Q15011 391 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 TMEM95Q3KNT9 176 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 C1orf100Q5SVJ3 147 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 LIPKQ5VXJ0 399 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 AWAT2Q6E213 333 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 C11orf88Q6PI97 169 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 Q6ZPA2 131 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 OR2T6Q8NHC8 308 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 PHYHIPQ92561 330 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 THRSPQ92748 146 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 OCSTAMPQ9BR26 566 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 TMED9Q9BVK6 235 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 SCN3BQ9NY72 215 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 PITPNC1Q9UKF7 332 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 WNK1Q9H4A3 2382 aa11.66□□□□□ -0.54
PPP1CA-201ENST00000312989 ADARB2-AS1A8MUL3 147 aa11.66□□□□□ -0.54
PPP1CA-201ENST00000312989 TIMM23O14925 209 aa11.66□□□□□ -0.54
PPP1CA-201ENST00000312989 VSIG8P0DPA2 414 aa11.66□□□□□ -0.54
PPP1CA-201ENST00000312989 NFYBP25208 207 aa11.66□□□□□ -0.54
PPP1CA-201ENST00000312989 RPS25P62851 125 aaKnown RBP11.66□□□□□ -0.54
PPP1CA-201ENST00000312989 UNC119Q13432 240 aa11.66□□□□□ -0.54
PPP1CA-201ENST00000312989 GPR176Q14439 515 aa11.66□□□□□ -0.54
PPP1CA-201ENST00000312989 MED22Q15528 200 aa11.66□□□□□ -0.54
PPP1CA-201ENST00000312989 PRSS48Q7RTY5 328 aa11.66□□□□□ -0.54
PPP1CA-201ENST00000312989 UBALD1Q8TB05 177 aa11.66□□□□□ -0.54
PPP1CA-201ENST00000312989 MMP27Q9H306 513 aa11.66□□□□□ -0.54
PPP1CA-201ENST00000312989 KCNK15Q9H427 330 aa11.66□□□□□ -0.54
PPP1CA-201ENST00000312989 ISYNA1Q9NPH2 558 aa11.66□□□□□ -0.54
PPP1CA-201ENST00000312989 TPRKBQ9Y3C4 175 aa11.66□□□□□ -0.54
PPP1CA-201ENST00000312989 FAM90A10PA6NDY2 464 aa11.65□□□□□ -0.55
PPP1CA-201ENST00000312989 FAM90A7PA6NKC0 464 aa11.65□□□□□ -0.55
PPP1CA-201ENST00000312989 FAM90A23PA8MXZ1 464 aa11.65□□□□□ -0.55
PPP1CA-201ENST00000312989 OOSP1A8MZH6 123 aa11.65□□□□□ -0.55
PPP1CA-201ENST00000312989 C12orf77C9JDV5 145 aa11.65□□□□□ -0.55
PPP1CA-201ENST00000312989 M0QZ24 198 aa11.65□□□□□ -0.55
PPP1CA-201ENST00000312989 SLC22A1O15245 554 aa11.65□□□□□ -0.55
PPP1CA-201ENST00000312989 KCNAB3O43448 404 aa11.65□□□□□ -0.55
PPP1CA-201ENST00000312989 RGS10O43665 173 aa11.65□□□□□ -0.55
PPP1CA-201ENST00000312989 ORC5O43913 435 aa11.65□□□□□ -0.55
PPP1CA-201ENST00000312989 MAP2K4P45985 399 aa11.65□□□□□ -0.55
PPP1CA-201ENST00000312989 MLLT11Q13015 90 aaPredicted RBP11.65□□□□□ -0.55
PPP1CA-201ENST00000312989 LTC4SQ16873 150 aa11.65□□□□□ -0.55
PPP1CA-201ENST00000312989 ATAD3CQ5T2N8 411 aa11.65□□□□□ -0.55
PPP1CA-201ENST00000312989 OR10K2Q6IF99 312 aa11.65□□□□□ -0.55
PPP1CA-201ENST00000312989 RAB12Q6IQ22 244 aa11.65□□□□□ -0.55
PPP1CA-201ENST00000312989 SLC16A12Q6ZSM3 486 aa11.65□□□□□ -0.55
PPP1CA-201ENST00000312989 C5orf24Q7Z6I8 188 aa11.65□□□□□ -0.55
PPP1CA-201ENST00000312989 ZNF439Q8NDP4 499 aa11.65□□□□□ -0.55
PPP1CA-201ENST00000312989 ST6GALNAC6Q969X2 333 aa11.65□□□□□ -0.55
PPP1CA-201ENST00000312989 S100A13Q99584 98 aa11.65□□□□□ -0.55
PPP1CA-201ENST00000312989 SELENOIQ9C0D9 397 aa11.65□□□□□ -0.55
PPP1CA-201ENST00000312989 LIN7BQ9HAP6 207 aa11.65□□□□□ -0.55
PPP1CA-201ENST00000312989 MBNL3Q9NUK0 354 aaKnown RBP11.65□□□□□ -0.55
PPP1CA-201ENST00000312989 A0A0A6YYD4 124 aa11.64□□□□□ -0.55
PPP1CA-201ENST00000312989 A0A1W2PPE3 182 aa11.64□□□□□ -0.55
PPP1CA-201ENST00000312989 TMEM14DPA8MWL7 114 aa11.64□□□□□ -0.55
PPP1CA-201ENST00000312989 OR2F2O95006 317 aa11.64□□□□□ -0.55
PPP1CA-201ENST00000312989 ATP6V1G2O95670 118 aa11.64□□□□□ -0.55
PPP1CA-201ENST00000312989 CPEP16870 476 aa11.64□□□□□ -0.55
PPP1CA-201ENST00000312989 GZMHP20718 246 aa11.64□□□□□ -0.55
PPP1CA-201ENST00000312989 PRRX1P54821 245 aa11.64□□□□□ -0.55
PPP1CA-201ENST00000312989 C16orf82Q7Z2V1 217 aa11.64□□□□□ -0.55
PPP1CA-201ENST00000312989 CEACAM19Q7Z692 300 aa11.64□□□□□ -0.55
PPP1CA-201ENST00000312989 LINC00311Q8N616 119 aa11.64□□□□□ -0.55
PPP1CA-201ENST00000312989 C11orf44Q8N8P7 122 aa11.64□□□□□ -0.55
PPP1CA-201ENST00000312989 C8orf31Q8N9H6 132 aa11.64□□□□□ -0.55
PPP1CA-201ENST00000312989 OR52M1Q8NGK5 317 aa11.64□□□□□ -0.55
PPP1CA-201ENST00000312989 CCDC107Q8WV48 283 aa11.64□□□□□ -0.55
PPP1CA-201ENST00000312989 UFD1Q92890 307 aa11.64□□□□□ -0.55
PPP1CA-201ENST00000312989 TMEM203Q969S6 136 aa11.64□□□□□ -0.55
PPP1CA-201ENST00000312989 FAM46BQ96A09 425 aa11.64□□□□□ -0.55
PPP1CA-201ENST00000312989 RBM14Q96PK6 669 aaKnown RBP11.64□□□□□ -0.55
PPP1CA-201ENST00000312989 SPACA1Q9HBV2 294 aa11.64□□□□□ -0.55
PPP1CA-201ENST00000312989 PCDHB16Q9NRJ7 776 aa11.64□□□□□ -0.55
PPP1CA-201ENST00000312989 GFOD1Q9NXC2 390 aa11.64□□□□□ -0.55
PPP1CA-201ENST00000312989 GHRLQ9UBU3 117 aa11.64□□□□□ -0.55
PPP1CA-201ENST00000312989 NOTCH1P46531 2555 aa11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 FOXI3A8MTJ6 420 aaPredicted RBP11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 AIPO00170 330 aa11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 TOR1AO14656 332 aa11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 SLC31A2O15432 143 aa11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 PDCD6O75340 191 aa11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 CRTAPO75718 401 aaPredicted RBP11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 GLAP06280 429 aa11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 RCC1P18754 421 aaPredicted RBP11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 SRMP19623 302 aa11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 CHATP28329 748 aa11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 GNG10P50151 68 aa11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 ZNF134P52741 427 aa11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 FABP5Q01469 135 aa11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 RBM39Q14498 530 aaKnown RBP11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 TBCEQ15813 527 aaPredicted RBP11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 SSX1Q16384 188 aa11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 HSD17B12Q53GQ0 312 aa11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 KIAA2026Q5HYC2 2103 aa11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 RBM48Q5RL73 367 aaKnown RBP11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 MRPL30Q8TCC3 161 aaKnown RBP11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 ARL11Q969Q4 196 aa11.63□□□□□ -0.55
PPP1CA-201ENST00000312989 CREB3L1Q96BA8 519 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms