RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 HIST1H2BNQ99877 126 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 HIST1H2BMQ99879 126 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 PRRG4Q9BZD6 226 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 ZNF552Q9H707 407 aaPredicted RBP11.6□□□□□ -0.55
CTTN-201ENST00000301843 TUBA4BQ9H853 241 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 LYRM2Q9NU23 88 aaPredicted RBP11.6□□□□□ -0.55
CTTN-201ENST00000301843 MTCH1Q9NZJ7 389 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 KIAA1549Q9HCM3 1950 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 ZNF816-ZNF321PA0A0X1KG74 233 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 ZNF732B4DXR9 585 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 SELEP16581 610 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 LMO1P25800 156 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 S100PP25815 95 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 GDF1P27539 372 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 PRDX4Q13162 271 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 HIKESHIQ53FT3 197 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 LYSMD4Q5XG99 296 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 COMMD1Q8N668 190 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 SMOC1Q9H4F8 434 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 GPR35Q9HC97 309 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 TAAR3PQ9P1P4 343 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 MED13Q9UHV7 2174 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 DEFA4P12838 97 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 B3GALT5-AS1P59052 145 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 WDR25Q64LD2 544 aaPredicted RBP11.59□□□□□ -0.55
CTTN-201ENST00000301843 SPINK14Q6IE38 97 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 PLPPR1Q8TBJ4 325 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 YPEL4Q96NS1 127 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 HES7Q9BYE0 225 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 OR1A1Q9P1Q5 309 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 PPP1R3CQ9UQK1 317 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 ICE1Q9Y2F5 2266 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 PITX3O75364 302 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 CBR3O75828 277 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 FABP4P15090 132 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 BMP5P22003 454 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 RAB5CP51148 216 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 PAX9P55771 341 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 RAC3P60763 192 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 NIPSNAP3BQ9BS92 247 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 C11orf1Q9H5F2 150 aa11.59□□□□□ -0.55
CTTN-201ENST00000301843 ERRFI1Q9UJM3 462 aaPredicted RBP11.59□□□□□ -0.55
CTTN-201ENST00000301843 HSPA12AO43301 675 aa11.58□□□□□ -0.56
CTTN-201ENST00000301843 CST2P09228 141 aa11.58□□□□□ -0.56
CTTN-201ENST00000301843 S100A2P29034 98 aa11.58□□□□□ -0.56
CTTN-201ENST00000301843 TMEM42Q69YG0 159 aa11.58□□□□□ -0.56
CTTN-201ENST00000301843 ZNF610Q8N9Z0 462 aa11.58□□□□□ -0.56
CTTN-201ENST00000301843 SGCZQ96LD1 299 aa11.58□□□□□ -0.56
CTTN-201ENST00000301843 RPRMQ9NS64 109 aa11.58□□□□□ -0.56
CTTN-201ENST00000301843 CD55P08174 381 aa11.58□□□□□ -0.56
CTTN-201ENST00000301843 TUBG1P23258 451 aa11.58□□□□□ -0.56
CTTN-201ENST00000301843 FKBP2P26885 142 aaKnown RBP11.58□□□□□ -0.56
CTTN-201ENST00000301843 ARF1P84077 181 aaKnown RBP11.58□□□□□ -0.56
CTTN-201ENST00000301843 ARL16Q0P5N6 197 aa11.58□□□□□ -0.56
CTTN-201ENST00000301843 Q0VFX4 171 aa11.58□□□□□ -0.56
CTTN-201ENST00000301843 FRZBQ92765 325 aa11.58□□□□□ -0.56
CTTN-201ENST00000301843 RPL36A-HNRNPH2H7BZ11 118 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 P04436 131 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 HOXA5P20719 270 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 LPAL2Q16609 132 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 OR2T2Q6IF00 324 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 CLDND2Q8NHS1 167 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 S100PBPQ96BU1 408 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 GPR146Q96CH1 333 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 C10orf35Q96D05 121 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 SNX22Q96L94 193 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 Q9N2K0 584 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 RBM7Q9Y580 266 aaKnown RBP11.57□□□□□ -0.56
CTTN-201ENST00000301843 CDS2O95674 445 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 CYC1P08574 325 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 NMSQ5H8A3 153 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 TMEM211Q6ICI0 200 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 OR5T1Q8NG75 326 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 GAR1Q9NY12 217 aaKnown RBP11.57□□□□□ -0.56
CTTN-201ENST00000301843 A0A087WZY1 265 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 LOC102723996A0A087X1L8 192 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 PGLYRP1O75594 196 aaPredicted RBP11.57□□□□□ -0.56
CTTN-201ENST00000301843 RHBDL1O75783 438 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 ASCL4Q6XD76 172 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 ZNF295-AS1Q8N0V1 137 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 AGBL5Q8NDL9 886 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 CCDC54Q8NEL0 328 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 LFNGQ8NES3 379 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 TVP23CQ96ET8 276 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 PLA2G3Q9NZ20 509 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 KIAA1456Q9P272 454 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 CACNG5Q9UF02 275 aa11.57□□□□□ -0.56
CTTN-201ENST00000301843 TRGC1P0CF51 173 aa11.56□□□□□ -0.56
CTTN-201ENST00000301843 PGA5P0DJD9 388 aa11.56□□□□□ -0.56
CTTN-201ENST00000301843 FGF5P12034 268 aa11.56□□□□□ -0.56
CTTN-201ENST00000301843 KHDC3LQ587J8 217 aa11.56□□□□□ -0.56
CTTN-201ENST00000301843 CPT1CQ8TCG5 803 aa11.56□□□□□ -0.56
CTTN-201ENST00000301843 ABHD5Q8WTS1 349 aa11.56□□□□□ -0.56
CTTN-201ENST00000301843 HLA-CQ95604 372 aa11.56□□□□□ -0.56
CTTN-201ENST00000301843 TCEAL7Q9BRU2 100 aa11.56□□□□□ -0.56
CTTN-201ENST00000301843 SLC25A31Q9H0C2 315 aa11.56□□□□□ -0.56
CTTN-201ENST00000301843 WDR54Q9H977 334 aa11.56□□□□□ -0.56
CTTN-201ENST00000301843 KCNS2Q9ULS6 477 aa11.56□□□□□ -0.56
CTTN-201ENST00000301843 SIT1Q9Y3P8 196 aa11.56□□□□□ -0.56
CTTN-201ENST00000301843 FAM166BA8MTA8 275 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms