RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 THNSL2Q86YJ6 484 aa20.81■□□□□ 0.92
SPTSSA-201ENST00000298130 RNASE11Q8TAA1 199 aaKnown RBP20.81■□□□□ 0.92
SPTSSA-201ENST00000298130 YIF1AO95070 293 aa20.81■□□□□ 0.92
SPTSSA-201ENST00000298130 VDAC1P21796 283 aa20.81■□□□□ 0.92
SPTSSA-201ENST00000298130 TAGLN2P37802 199 aaKnown RBP20.81■□□□□ 0.92
SPTSSA-201ENST00000298130 HIKESHIQ53FT3 197 aa20.81■□□□□ 0.92
SPTSSA-201ENST00000298130 TAAR9Q96RI9 348 aa20.81■□□□□ 0.92
SPTSSA-201ENST00000298130 SPIN2AQ99865 258 aa20.81■□□□□ 0.92
SPTSSA-201ENST00000298130 SPIN2BQ9BPZ2 258 aa20.81■□□□□ 0.92
SPTSSA-201ENST00000298130 RSG1Q9BU20 258 aa20.81■□□□□ 0.92
SPTSSA-201ENST00000298130 CLN5O75503 358 aa20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 SRPXP78539 464 aa20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 HOXA4Q00056 320 aaPredicted RBP20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 ID3Q02535 119 aa20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 RHEBQ15382 184 aa20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 OR2T2Q6IF00 324 aa20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 PCSK4Q6UW60 755 aa20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 MRPL30Q8TCC3 161 aaKnown RBP20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 SLC25A31Q9H0C2 315 aa20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 UCP1P25874 307 aa20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 LHX2P50458 406 aa20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 TRA2AQ13595 282 aaKnown RBP eCLIP20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 SLC25A24Q6NUK1 477 aa20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 CMTM1Q8IZ96 169 aa20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 GPR146Q96CH1 333 aa20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 ATP23Q9Y6H3 246 aa20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 A0A1W2PR80 420 aa20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 CD300LBA8K4G0 201 aa20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 HSPA12AO43301 675 aa20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 NEURL1O76050 574 aa20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 SELEP16581 610 aa20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 CA6P23280 308 aa20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 AKR1C8PQ5T2L2 129 aa20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 C6orf15Q6UXA7 325 aaPredicted RBP20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 FAM185AQ8N0U4 392 aa20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 HIST1H2AAQ96QV6 131 aa20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 VSIRQ9H7M9 311 aa20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 PPP1R3CQ9UQK1 317 aa20.8■□□□□ 0.92
SPTSSA-201ENST00000298130 MED12LQ86YW9 2145 aa20.79■□□□□ 0.92
SPTSSA-201ENST00000298130 TRAV24A0A0B4J272 114 aa20.79■□□□□ 0.92
SPTSSA-201ENST00000298130 SRP19P09132 144 aaKnown RBP20.79■□□□□ 0.92
SPTSSA-201ENST00000298130 UBE2KP61086 200 aa20.79■□□□□ 0.92
SPTSSA-201ENST00000298130 NUFIP2Q7Z417 695 aaKnown RBP20.79■□□□□ 0.92
SPTSSA-201ENST00000298130 OR2M7Q8NG81 312 aa20.79■□□□□ 0.92
SPTSSA-201ENST00000298130 TUBA4BQ9H853 241 aa20.79■□□□□ 0.92
SPTSSA-201ENST00000298130 TUSC2O75896 110 aa20.79■□□□□ 0.92
SPTSSA-201ENST00000298130 SLC34A2O95436 690 aa20.79■□□□□ 0.92
SPTSSA-201ENST00000298130 FABP1P07148 127 aa20.79■□□□□ 0.92
SPTSSA-201ENST00000298130 DUSP3P51452 185 aaPredicted RBP20.79■□□□□ 0.92
SPTSSA-201ENST00000298130 FGF8P55075 233 aaPredicted RBP20.79■□□□□ 0.92
SPTSSA-201ENST00000298130 ICAM4Q14773 271 aa20.79■□□□□ 0.92
SPTSSA-201ENST00000298130 GSN-AS1Q9NRJ2 163 aa20.79■□□□□ 0.92
SPTSSA-201ENST00000298130 SERPINA7P05543 415 aa20.78■□□□□ 0.92
SPTSSA-201ENST00000298130 CLDN18P56856 261 aa20.78■□□□□ 0.92
SPTSSA-201ENST00000298130 ZNF295-AS1Q8N0V1 137 aa20.78■□□□□ 0.92
SPTSSA-201ENST00000298130 LFNGQ8NES3 379 aa20.78■□□□□ 0.92
SPTSSA-201ENST00000298130 OR1K1Q8NGR3 316 aa20.78■□□□□ 0.92
SPTSSA-201ENST00000298130 PRSS50Q9UI38 385 aa20.78■□□□□ 0.92
SPTSSA-201ENST00000298130 CACNA1DQ01668 2161 aa20.78■□□□□ 0.92
SPTSSA-201ENST00000298130 DSPP15924 2871 aaKnown RBP20.78■□□□□ 0.92
SPTSSA-201ENST00000298130 CNOT4O95628 575 aaKnown RBP20.78■□□□□ 0.92
SPTSSA-201ENST00000298130 IGHV2-5P01817 119 aa20.78■□□□□ 0.92
SPTSSA-201ENST00000298130 CXCL1P09341 107 aa20.78■□□□□ 0.92
SPTSSA-201ENST00000298130 DLK1P80370 383 aa20.78■□□□□ 0.92
SPTSSA-201ENST00000298130 ZNF429Q86V71 674 aa20.78■□□□□ 0.92
SPTSSA-201ENST00000298130 TECTBQ96PL2 329 aa20.78■□□□□ 0.92
SPTSSA-201ENST00000298130 RNF115Q9Y4L5 304 aa20.78■□□□□ 0.92
SPTSSA-201ENST00000298130 ZNF703Q9H7S9 590 aaPredicted RBP20.77■□□□□ 0.92
SPTSSA-201ENST00000298130 GNG13Q9P2W3 67 aa20.77■□□□□ 0.92
SPTSSA-201ENST00000298130 BOKQ9UMX3 212 aaPredicted RBP20.77■□□□□ 0.92
SPTSSA-201ENST00000298130 TRBV23-1A0A0A0MS06 115 aa20.77■□□□□ 0.92
SPTSSA-201ENST00000298130 SCAF4O95104 1147 aaKnown RBP20.77■□□□□ 0.92
SPTSSA-201ENST00000298130 SERPINE2P07093 398 aa20.77■□□□□ 0.92
SPTSSA-201ENST00000298130 F2RP25116 425 aa20.77■□□□□ 0.92
SPTSSA-201ENST00000298130 RPL23AP62750 156 aaKnown RBP20.77■□□□□ 0.92
SPTSSA-201ENST00000298130 MPV17LQ2QL34 196 aa20.77■□□□□ 0.92
SPTSSA-201ENST00000298130 LCN15Q6UWW0 184 aa20.77■□□□□ 0.92
SPTSSA-201ENST00000298130 APOBEC3DQ96AK3 386 aaPredicted RBP20.77■□□□□ 0.92
SPTSSA-201ENST00000298130 WSB1Q9Y6I7 421 aa20.77■□□□□ 0.92
SPTSSA-201ENST00000298130 PRR14LQ5THK1 2151 aa20.77■□□□□ 0.91
SPTSSA-201ENST00000298130 GTF3C1Q12789 2109 aa20.76■□□□□ 0.91
SPTSSA-201ENST00000298130 KIR2DS1A0A191URI9 304 aa20.76■□□□□ 0.91
SPTSSA-201ENST00000298130 ZFP92A6NM28 416 aa20.76■□□□□ 0.91
SPTSSA-201ENST00000298130 SIRPB1O00241 398 aa20.76■□□□□ 0.91
SPTSSA-201ENST00000298130 METTL15P1P0C7V9 234 aa20.76■□□□□ 0.91
SPTSSA-201ENST00000298130 WNT5AP41221 380 aa20.76■□□□□ 0.91
SPTSSA-201ENST00000298130 KIR2DS4P43632 304 aa20.76■□□□□ 0.91
SPTSSA-201ENST00000298130 KIR2DS1Q14954 304 aa20.76■□□□□ 0.91
SPTSSA-201ENST00000298130 FAM53AQ6NSI3 398 aaPredicted RBP20.76■□□□□ 0.91
SPTSSA-201ENST00000298130 Q8NFD4 153 aa20.76■□□□□ 0.91
SPTSSA-201ENST00000298130 OR10J5Q8NHC4 309 aa20.76■□□□□ 0.91
SPTSSA-201ENST00000298130 RBM7Q9Y580 266 aaKnown RBP20.76■□□□□ 0.91
SPTSSA-201ENST00000298130 TGIF2-C20orf24A0A0A6YYL0 155 aa20.76■□□□□ 0.91
SPTSSA-201ENST00000298130 SSPNQ14714 243 aa20.76■□□□□ 0.91
SPTSSA-201ENST00000298130 MUCL1Q96DR8 90 aa20.76■□□□□ 0.91
SPTSSA-201ENST00000298130 CACNG5Q9UF02 275 aa20.76■□□□□ 0.91
SPTSSA-201ENST00000298130 HEPN1Q6WQI6 88 aa20.75■□□□□ 0.91
SPTSSA-201ENST00000298130 Q8WTZ3 238 aa20.75■□□□□ 0.91
SPTSSA-201ENST00000298130 POM121L2Q96KW2 1035 aa20.75■□□□□ 0.91
SPTSSA-201ENST00000298130 METTL1Q9UBP6 276 aaKnown RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms