RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 UHRF2Q96PU4 802 aa11.73□□□□□ -0.53
HPS3-201ENST00000296051 G3V3Q6 166 aa11.73□□□□□ -0.53
HPS3-201ENST00000296051 SULT1A2P50226 295 aa11.73□□□□□ -0.53
HPS3-201ENST00000296051 KRTDAPP60985 99 aa11.73□□□□□ -0.53
HPS3-201ENST00000296051 PIGYQ3MUY2 71 aa11.73□□□□□ -0.53
HPS3-201ENST00000296051 NSUN5P2Q63ZY6 315 aa11.73□□□□□ -0.53
HPS3-201ENST00000296051 BHLHA15Q7RTS1 189 aaPredicted RBP11.73□□□□□ -0.53
HPS3-201ENST00000296051 MYPOPQ86VE0 399 aaPredicted RBP11.73□□□□□ -0.53
HPS3-201ENST00000296051 RNF133Q8WVZ7 376 aa11.73□□□□□ -0.53
HPS3-201ENST00000296051 ZDHHC11Q9H8X9 412 aa11.73□□□□□ -0.53
HPS3-201ENST00000296051 FBP1P09467 338 aa11.73□□□□□ -0.53
HPS3-201ENST00000296051 BORCS7Q96B45 105 aa11.73□□□□□ -0.53
HPS3-201ENST00000296051 TM4SF19Q96DZ7 209 aa11.73□□□□□ -0.53
HPS3-201ENST00000296051 BTF3L4Q96K17 158 aa11.73□□□□□ -0.53
HPS3-201ENST00000296051 RARRES2Q99969 163 aa11.73□□□□□ -0.53
HPS3-201ENST00000296051 TTTY12Q9BZ98 90 aa11.73□□□□□ -0.53
HPS3-201ENST00000296051 NAAAQ02083 359 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 HOGA1Q86XE5 327 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 GFI1Q99684 422 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 COMMD5Q9GZQ3 224 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 BRCA1P38398 1863 aaKnown RBP11.72□□□□□ -0.53
HPS3-201ENST00000296051 PLXNA1Q9UIW2 1896 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 A0A1W2PR77 199 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 MAP1LC3B2A6NCE7 125 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 CTSDP07339 412 aaPredicted RBP11.72□□□□□ -0.53
HPS3-201ENST00000296051 EWSR1Q01844 656 aaKnown RBP eCLIP11.72□□□□□ -0.53
HPS3-201ENST00000296051 PRDX4Q13162 271 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 ZNF343Q6P1L6 599 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 ERGIC1Q969X5 290 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 MAP1LC3BQ9GZQ8 125 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 SH3BGRL3Q9H299 93 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 CACNG5Q9UF02 275 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 AQP7O14520 342 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 C9orf40Q8IXQ3 194 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 OR10P1Q8NGE3 313 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 DDA1Q9BW61 102 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 HS3ST3B1Q9Y662 390 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 A0A0G2JMZ2 1700 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 LRRC37A2A6NM11 1700 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 C17orf112F2Z3M2 114 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 IGHV3-13P01766 116 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 IGHV3-7P01780 117 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 CD1AP06126 327 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 EGR4Q05215 589 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 UBE2V2Q15819 145 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 LY6G6FQ5SQ64 297 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 GSN-AS1Q9NRJ2 163 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 MYLKQ15746 1914 aa11.72□□□□□ -0.53
HPS3-201ENST00000296051 DOCK7Q96N67 2140 aa11.71□□□□□ -0.53
HPS3-201ENST00000296051 SHANK1Q9Y566 2161 aa11.71□□□□□ -0.53
HPS3-201ENST00000296051 TERTO14746 1132 aaKnown RBP11.71□□□□□ -0.53
HPS3-201ENST00000296051 RAB4AP20338 218 aa11.71□□□□□ -0.53
HPS3-201ENST00000296051 PPP1CBP62140 327 aa11.71□□□□□ -0.53
HPS3-201ENST00000296051 SCGB2A2Q13296 93 aa11.71□□□□□ -0.53
HPS3-201ENST00000296051 LIAT1Q6ZQX7 453 aa11.71□□□□□ -0.53
HPS3-201ENST00000296051 TMEM251Q8N6I4 163 aa11.71□□□□□ -0.53
HPS3-201ENST00000296051 SOX7Q9BT81 388 aa11.71□□□□□ -0.53
HPS3-201ENST00000296051 DOK5Q9P104 306 aa11.71□□□□□ -0.53
HPS3-201ENST00000296051 S100A7P31151 101 aa11.71□□□□□ -0.53
HPS3-201ENST00000296051 FGF5P12034 268 aa11.71□□□□□ -0.54
HPS3-201ENST00000296051 FHL5Q5TD97 284 aa11.71□□□□□ -0.54
HPS3-201ENST00000296051 LRRC29Q8WV35 223 aa11.71□□□□□ -0.54
HPS3-201ENST00000296051 GLRX2Q9NS18 164 aa11.71□□□□□ -0.54
HPS3-201ENST00000296051 POMT1Q9Y6A1 747 aa11.71□□□□□ -0.54
HPS3-201ENST00000296051 CXorf65A6NEN9 183 aa11.71□□□□□ -0.54
HPS3-201ENST00000296051 TCAPO15273 167 aa11.71□□□□□ -0.54
HPS3-201ENST00000296051 RPS4Y1P22090 263 aaKnown RBP11.71□□□□□ -0.54
HPS3-201ENST00000296051 IL13RA2Q14627 380 aa11.71□□□□□ -0.54
HPS3-201ENST00000296051 MRGPRGQ86SM5 289 aa11.71□□□□□ -0.54
HPS3-201ENST00000296051 DAZAP1Q96EP5 407 aaKnown RBP11.71□□□□□ -0.54
HPS3-201ENST00000296051 OR51M1Q9H341 326 aa11.71□□□□□ -0.54
HPS3-201ENST00000296051 SAP30LQ9HAJ7 183 aa11.71□□□□□ -0.54
HPS3-201ENST00000296051 MYOZ1Q9NP98 299 aaPredicted RBP11.71□□□□□ -0.54
HPS3-201ENST00000296051 PTPN13Q12923 2485 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 PI4KAP42356 2102 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 GALR1P47211 349 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 FUT6P51993 359 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 CYB5R2Q6BCY4 276 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 TBC1D26Q86UD7 250 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 REG4Q9BYZ8 158 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 FOXJ2Q9P0K8 574 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 LAMA2P24043 3122 aaKnown RBP11.7□□□□□ -0.54
HPS3-201ENST00000296051 FAM157AC9JC47 383 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 CT45A6P0DMU7 189 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 CT45A5P0DMU8 189 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 CT45A7P0DMV0 189 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 HKR1P10072 659 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 PRF1P14222 555 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 TMEM241Q24JQ0 296 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 HIKESHIQ53FT3 197 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 CT45A1Q5HYN5 189 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 CT45A3Q8NHU0 189 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 CLDN23Q96B33 292 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 BRCA2P51587 3418 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 IGLV1-36A0A0B4J1U3 117 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 OR5H1A6NKK0 313 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 PDCD6O75340 191 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 RTL8BQ17RB0 113 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 OR1K1Q8NGR3 316 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 RPEQ96AT9 228 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms