RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 IGHV3OR15-7A0A075B7D8 119 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 ATP6V1FQ16864 119 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 ZNF721Q8TF20 911 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 AAMDCQ9H7C9 122 aa13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 ZNF107Q9UII5 783 aaPredicted RBP13.41□□□□□ -0.26
SHROOM4-201ENST00000289292 SNURFLB1AK76 121 aa13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 SLC35B1P78383 322 aa13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 FLYWCH2Q96CP2 140 aaKnown RBP13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 RAB29O14966 203 aa13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 PIN1P1O15428 100 aa13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 RNPS1Q15287 305 aaKnown RBP13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 TGIF1Q15583 401 aa13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 WFIKKN1Q96NZ8 548 aa13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 GABRG3Q99928 467 aa13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 SUCLG1P53597 346 aaKnown RBP13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 HIKESHIQ53FT3 197 aa13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 SPRED2Q7Z698 418 aa13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 RNF2Q99496 336 aa13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 TNFSF14O43557 240 aa13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 ZNF207O43670 478 aaKnown RBP13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 RECKO95980 971 aa13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 ASAH2BP0C7U1 165 aa13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 RNF224P0DH78 156 aa13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 COX7A1P24310 79 aa13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 SPCS3P61009 180 aa13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 EIF3IQ13347 325 aaKnown RBP13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 HIST3H3Q16695 136 aa13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 LBHQ53QV2 105 aaPredicted RBP13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 CCL17Q92583 94 aa13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 ZNF385AQ96PM9 386 aaKnown RBP13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 UBR3Q6ZT12 1888 aa13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 COL4A5P29400 1685 aa13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 FOXS1O43638 330 aa13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 FCGR3AP08637 254 aa13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 SULT1A2P50226 295 aa13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 WDR25Q64LD2 544 aaPredicted RBP13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 SLC35E3Q7Z769 313 aa13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 TDRD15B5MCY1 1934 aaKnown RBP13.4□□□□□ -0.26
SHROOM4-201ENST00000289292 SHISA7A6NL88 538 aa13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 VDAC1P21796 283 aa13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 IL36GQ9NZH8 169 aa13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 LRRC3CA6NJW4 275 aa13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 DIRC3C9JPN6 131 aa13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 SIAH2O43255 324 aa13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 SEC11BP0C7V7 166 aa13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 FAM157CP0CG43 387 aa13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 CSRP3P50461 194 aa13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 NHLRC3Q5JS37 347 aa13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 SPEM1Q8N4L4 309 aa13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 OR4F17Q8NGA8 305 aa13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 MRPL30Q8TCC3 161 aaKnown RBP13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 ANGPTL4Q9BY76 406 aa13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 COL11A2P13942 1736 aaPredicted RBP13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 A0A1W2PPE3 182 aa13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 MAGEA5P43359 124 aa13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 WNT5AP41221 380 aa13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 ZXDCQ2QGD7 858 aaPredicted RBP13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 ZNF260Q3ZCT1 412 aa13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 A0A1W2PRD5 423 aa13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 A0A1W2PRF3 423 aa13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 A0A1W2PRM7 423 aa13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 SHISA3A0PJX4 238 aa13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 HINT1P49773 126 aaPredicted RBP13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 LSM6P62312 80 aaKnown RBP13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 CXXC4Q9H2H0 198 aa13.39□□□□□ -0.27
SHROOM4-201ENST00000289292 RPL36A-HNRNPH2H7BZ11 118 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 HOXD4P09016 255 aaPredicted RBP13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 SRD5A2P31213 254 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 ZNF137PP52743 207 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 IGHV3-21A0A0B4J1V1 117 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 TRBV5-5A0A0J9YX44 114 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 OR52M1Q8NGK5 317 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 CHST5Q9GZS9 411 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 TINAGQ9UJW2 476 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 ASCC3Q8N3C0 2202 aaKnown RBP13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 SEMA7AO75326 666 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 GLULP15104 373 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 MPLP40238 635 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 AESQ08117 197 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 ATG2BQ96BY7 2078 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 TRGV8A0A0C4DH27 118 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 DDTP30046 118 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 MMP16P51512 607 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 ZP1P60852 638 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 CD200R1LQ6Q8B3 271 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 MRGPRGQ86SM5 289 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 OOEPA6NGQ2 149 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 OR5B21A6NL26 309 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 UPK3AO75631 287 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 S100A4P26447 101 aaKnown RBP13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 OR2M3Q8NG83 312 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 KCNE5Q9UJ90 142 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 OR2W1Q9Y3N9 320 aa13.38□□□□□ -0.27
SHROOM4-201ENST00000289292 H0YL77 283 aa13.37□□□□□ -0.27
SHROOM4-201ENST00000289292 KIR2DS2P43631 304 aa13.37□□□□□ -0.27
SHROOM4-201ENST00000289292 NXPH1P58417 271 aa13.37□□□□□ -0.27
SHROOM4-201ENST00000289292 TNXAQ16473 311 aa13.37□□□□□ -0.27
SHROOM4-201ENST00000289292 MAP1LC3CQ9BXW4 147 aa13.37□□□□□ -0.27
SHROOM4-201ENST00000289292 MYO7AQ13402 2215 aa13.37□□□□□ -0.27
SHROOM4-201ENST00000289292 LOC101059948A0A1B0GTJ6 334 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms