RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 GAPDHP04406 335 aaKnown RBP10.08□□□□□ -0.8
CD44-203ENST00000278386 IGHV3-43DP0DP04 118 aa10.08□□□□□ -0.8
CD44-203ENST00000278386 IL3RAP26951 378 aa10.08□□□□□ -0.8
CD44-203ENST00000278386 BDKRB2P30411 391 aa10.08□□□□□ -0.8
CD44-203ENST00000278386 ZNF93P35789 620 aaPredicted RBP10.08□□□□□ -0.8
CD44-203ENST00000278386 EGFEM1PQ0D2K5 195 aa10.08□□□□□ -0.8
CD44-203ENST00000278386 ZNF816Q0VGE8 651 aaPredicted RBP10.08□□□□□ -0.8
CD44-203ENST00000278386 XAF1Q6GPH4 301 aa10.08□□□□□ -0.8
CD44-203ENST00000278386 ZNF529Q6P280 563 aa10.08□□□□□ -0.8
CD44-203ENST00000278386 RPL22L1Q6P5R6 122 aaKnown RBP10.08□□□□□ -0.8
CD44-203ENST00000278386 SLC16A12Q6ZSM3 486 aa10.08□□□□□ -0.8
CD44-203ENST00000278386 LINC00596Q86U02 117 aa10.08□□□□□ -0.8
CD44-203ENST00000278386 STPG2Q8N412 459 aa10.08□□□□□ -0.8
CD44-203ENST00000278386 OR52N1Q8NH53 320 aa10.08□□□□□ -0.8
CD44-203ENST00000278386 CCDC107Q8WV48 283 aa10.08□□□□□ -0.8
CD44-203ENST00000278386 APH1BQ8WW43 257 aa10.08□□□□□ -0.8
CD44-203ENST00000278386 ARL11Q969Q4 196 aa10.08□□□□□ -0.8
CD44-203ENST00000278386 ZFP57Q9NU63 452 aa10.08□□□□□ -0.8
CD44-203ENST00000278386 PAK1IP1Q9NWT1 392 aaPredicted RBP10.08□□□□□ -0.8
CD44-203ENST00000278386 IL36GQ9NZH8 169 aa10.08□□□□□ -0.8
CD44-203ENST00000278386 AIPO00170 330 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 AP4M1O00189 453 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 LIMS3P0CW19 117 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 LIMS4P0CW20 117 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 SLC6A1P30531 599 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 MYCNOSP40205 109 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 SMN1Q16637 294 aaKnown RBP10.07□□□□□ -0.8
CD44-203ENST00000278386 MPV17LQ2QL34 196 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 SLC22A6Q4U2R8 563 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 CCDC58Q4VC31 144 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 NHLRC3Q5JS37 347 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 OR2G6Q5TZ20 316 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 ASCL4Q6XD76 172 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 TMPRSS11AQ6ZMR5 421 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 IZUMO1Q8IYV9 350 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 STX19Q8N4C7 294 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 COMMD1Q8N668 190 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 ZNF555Q8NEP9 628 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 Q8NFD4 153 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 OR13C5Q8NGS8 318 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 OR2T10Q8NGZ9 312 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 ORAI1Q96D31 301 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 EAF1Q96JC9 268 aaPredicted RBP10.07□□□□□ -0.8
CD44-203ENST00000278386 DUX3Q96PT4 197 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 SLC29A1Q99808 456 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 IFT22Q9H7X7 185 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 TMEM138Q9NPI0 162 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 GFOD1Q9NXC2 390 aa10.07□□□□□ -0.8
CD44-203ENST00000278386 KMT2CQ8NEZ4 4911 aaKnown RBP10.07□□□□□ -0.8
CD44-203ENST00000278386 A0A1W2PP11 408 aa10.06□□□□□ -0.8
CD44-203ENST00000278386 GZMHP20718 246 aa10.06□□□□□ -0.8
CD44-203ENST00000278386 GPR12P47775 334 aa10.06□□□□□ -0.8
CD44-203ENST00000278386 ETV1P50549 477 aa10.06□□□□□ -0.8
CD44-203ENST00000278386 RIPK1Q13546 671 aa10.06□□□□□ -0.8
CD44-203ENST00000278386 DCTN2Q13561 401 aaKnown RBP10.06□□□□□ -0.8
CD44-203ENST00000278386 UNQ9370/PRO34162Q6UXP9 181 aa10.06□□□□□ -0.8
CD44-203ENST00000278386 TGIF2LXQ8IUE1 241 aa10.06□□□□□ -0.8
CD44-203ENST00000278386 ZNF695Q8IW36 515 aa10.06□□□□□ -0.8
CD44-203ENST00000278386 C10orf67Q8IYJ2 551 aa10.06□□□□□ -0.8
CD44-203ENST00000278386 SMIM19Q96E16 107 aa10.06□□□□□ -0.8
CD44-203ENST00000278386 ZNF184Q99676 751 aaPredicted RBP10.06□□□□□ -0.8
CD44-203ENST00000278386 FGF20Q9NP95 211 aaPredicted RBP10.06□□□□□ -0.8
CD44-203ENST00000278386 LIN7CQ9NUP9 197 aaKnown RBP10.06□□□□□ -0.8
CD44-203ENST00000278386 MRPS18AQ9NVS2 196 aaKnown RBP10.06□□□□□ -0.8
CD44-203ENST00000278386 CKLFQ9UBR5 152 aa10.06□□□□□ -0.8
CD44-203ENST00000278386 COL7A1Q02388 2944 aa10.06□□□□□ -0.8
CD44-203ENST00000278386 C15orf65H3BRN8 121 aa10.05□□□□□ -0.8
CD44-203ENST00000278386 RRP9O43818 475 aaKnown RBP10.05□□□□□ -0.8
CD44-203ENST00000278386 ZNF780AO75290 641 aaPredicted RBP10.05□□□□□ -0.8
CD44-203ENST00000278386 RPLP1P05386 114 aaKnown RBP10.05□□□□□ -0.8
CD44-203ENST00000278386 GTF2F2P13984 249 aa10.05□□□□□ -0.8
CD44-203ENST00000278386 MYL12AP19105 171 aa10.05□□□□□ -0.8
CD44-203ENST00000278386 DEFB136Q30KP8 78 aa10.05□□□□□ -0.8
CD44-203ENST00000278386 CXorf66Q5JRM2 361 aaPredicted RBP10.05□□□□□ -0.8
CD44-203ENST00000278386 FAM53AQ6NSI3 398 aaPredicted RBP10.05□□□□□ -0.8
CD44-203ENST00000278386 TEX38Q6PEX7 206 aa10.05□□□□□ -0.8
CD44-203ENST00000278386 LCNL1Q6ZST4 164 aa10.05□□□□□ -0.8
CD44-203ENST00000278386 PQLC1Q8N2U9 271 aa10.05□□□□□ -0.8
CD44-203ENST00000278386 PRR18Q8N4B5 295 aa10.05□□□□□ -0.8
CD44-203ENST00000278386 JAGN1Q8N5M9 183 aa10.05□□□□□ -0.8
CD44-203ENST00000278386 LINC00311Q8N616 119 aa10.05□□□□□ -0.8
CD44-203ENST00000278386 OR52M1Q8NGK5 317 aa10.05□□□□□ -0.8
CD44-203ENST00000278386 RTN4IP1Q8WWV3 396 aaPredicted RBP10.05□□□□□ -0.8
CD44-203ENST00000278386 P2RX4Q99571 388 aa10.05□□□□□ -0.8
CD44-203ENST00000278386 B9D2Q9BPU9 175 aa10.05□□□□□ -0.8
CD44-203ENST00000278386 RASL11BQ9BPW5 248 aa10.05□□□□□ -0.8
CD44-203ENST00000278386 GON7Q9BXV9 100 aa10.05□□□□□ -0.8
CD44-203ENST00000278386 ABCG5Q9H222 651 aa10.05□□□□□ -0.8
CD44-203ENST00000278386 RAB9BQ9NP90 201 aa10.05□□□□□ -0.8
CD44-203ENST00000278386 GNG12Q9UBI6 72 aa10.05□□□□□ -0.8
CD44-203ENST00000278386 IRGMA1A4Y4 181 aa10.04□□□□□ -0.8
CD44-203ENST00000278386 MAGEA13PA6NCF6 341 aa10.04□□□□□ -0.8
CD44-203ENST00000278386 LINC01548A6NM66 108 aa10.04□□□□□ -0.8
CD44-203ENST00000278386 H0YHG0 523 aa10.04□□□□□ -0.8
CD44-203ENST00000278386 CCL24O00175 119 aa10.04□□□□□ -0.8
CD44-203ENST00000278386 SLC31A2O15432 143 aa10.04□□□□□ -0.8
CD44-203ENST00000278386 SPINT2O43291 252 aa10.04□□□□□ -0.8
CD44-203ENST00000278386 TXNL1O43396 289 aa10.04□□□□□ -0.8
CD44-203ENST00000278386 ORC5O43913 435 aa10.04□□□□□ -0.8
CD44-203ENST00000278386 WBP4O75554 376 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms