RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 PRDM14Q9GZV8 571 aa14.19□□□□□ -0.14
VPS54-201ENST00000272322 Q9N2K0 584 aa14.19□□□□□ -0.14
VPS54-201ENST00000272322 TINAGQ9UJW2 476 aa14.19□□□□□ -0.14
VPS54-201ENST00000272322 TRAPPC2LQ9UL33 140 aa14.19□□□□□ -0.14
VPS54-201ENST00000272322 DEGS1O15121 323 aa14.19□□□□□ -0.14
VPS54-201ENST00000272322 CYC1P08574 325 aa14.19□□□□□ -0.14
VPS54-201ENST00000272322 FABP6P51161 128 aa14.19□□□□□ -0.14
VPS54-201ENST00000272322 ZNF808Q8N4W9 903 aaPredicted RBP14.19□□□□□ -0.14
VPS54-201ENST00000272322 ARFGEF3Q5TH69 2177 aa14.19□□□□□ -0.14
VPS54-201ENST00000272322 SERPINE2P07093 398 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 OR2B8PP59922 312 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 FGF12P61328 243 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 TMEM211Q6ICI0 200 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 FAM58AQ8N1B3 248 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 C18orf12Q96KH6 178 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 SPRR3Q9UBC9 169 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 URGCP-MRPS24S4R325 110 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 ABCA1O95477 2261 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 TAAR5O14804 337 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 WNT9BO14905 357 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 HMGB3O15347 200 aaKnown RBP14.18□□□□□ -0.14
VPS54-201ENST00000272322 TXNL1O43396 289 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 LYL1P12980 280 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 DYNLT3P51808 116 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 BTNL8Q6UX41 500 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 TMEM222Q9H0R3 208 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 C19orf12Q9NSK7 152 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 SPAARA0A1B0GVQ0 90 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 ZNF724A8MTY0 619 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 ATP6V0CP27449 155 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 SOX8P57073 446 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 SPINK9Q5DT21 86 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 OR10J5Q8NHC4 309 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 GALNT14Q96FL9 552 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 TRIB1Q96RU8 372 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 RSRP1Q9BUV0 290 aa14.18□□□□□ -0.14
VPS54-201ENST00000272322 TRAV24A0A0B4J272 114 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 H7C1Q1 480 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 CMTM1Q8IZ96 169 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 SFT2D1Q8WV19 159 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 PLEKHA2Q9HB19 425 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 OBP2BQ9NPH6 170 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 GLRX2Q9NS18 164 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 CUL9Q8IWT3 2517 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 SPTAN1Q13813 2472 aaKnown RBP14.17□□□□□ -0.14
VPS54-201ENST00000272322 TRGV5A0A0B4J1U4 118 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 hCG_1809904A0A1W2PP81 198 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 A0A1W2PR64 198 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 A0A1W2PRV1 198 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 DEFB108AA8MXU0 73 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 GPR137BO60478 399 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 ECI1P42126 302 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 ADAM5Q6NVV9 412 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 SELENOHQ8IZQ5 122 aaKnown RBP14.17□□□□□ -0.14
VPS54-201ENST00000272322 MSL2Q9HCI7 577 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 FAM86C1Q9NVL1 165 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 M0R296 226 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 NXPH2O95156 264 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 HFEQ30201 348 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 AWAT1Q58HT5 328 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 ASCL4Q6XD76 172 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 IL34Q6ZMJ4 242 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 LILRB1Q8NHL6 650 aaPredicted RBP14.17□□□□□ -0.14
VPS54-201ENST00000272322 SEC11CQ9BY50 192 aa14.17□□□□□ -0.14
VPS54-201ENST00000272322 IGHV3-43A0A0B4J1X8 118 aa14.16□□□□□ -0.14
VPS54-201ENST00000272322 A0A1W2PPE2 198 aa14.16□□□□□ -0.14
VPS54-201ENST00000272322 KLRC4-KLRK1H3BQV0 150 aa14.16□□□□□ -0.14
VPS54-201ENST00000272322 IGHV3-43DP0DP04 118 aa14.16□□□□□ -0.14
VPS54-201ENST00000272322 ZNF766Q5HY98 468 aa14.16□□□□□ -0.14
VPS54-201ENST00000272322 PEAR1Q5VY43 1037 aaPredicted RBP14.16□□□□□ -0.14
VPS54-201ENST00000272322 AIFM2Q9BRQ8 373 aa14.16□□□□□ -0.14
VPS54-201ENST00000272322 MED13LQ71F56 2210 aa14.16□□□□□ -0.14
VPS54-201ENST00000272322 TRDCB7Z8K6 153 aa14.16□□□□□ -0.14
VPS54-201ENST00000272322 UMAD1C9J7I0 102 aa14.16□□□□□ -0.14
VPS54-201ENST00000272322 FAM24BQ8N5W8 94 aa14.16□□□□□ -0.14
VPS54-201ENST00000272322 TMEM252Q8N6L7 170 aa14.16□□□□□ -0.14
VPS54-201ENST00000272322 DLL3Q9NYJ7 618 aa14.16□□□□□ -0.14
VPS54-201ENST00000272322 ABCA4P78363 2273 aa14.16□□□□□ -0.14
VPS54-201ENST00000272322 METTL15P1P0C7V9 234 aa14.16□□□□□ -0.14
VPS54-201ENST00000272322 CD46P15529 392 aa14.16□□□□□ -0.14
VPS54-201ENST00000272322 UBE2NP61088 152 aaKnown RBP14.16□□□□□ -0.14
VPS54-201ENST00000272322 Q6ZRM9 215 aa14.16□□□□□ -0.14
VPS54-201ENST00000272322 COLCA1Q6ZS62 124 aa14.16□□□□□ -0.14
VPS54-201ENST00000272322 SAT2Q96F10 170 aaPredicted RBP14.16□□□□□ -0.14
VPS54-201ENST00000272322 ZFP57Q9NU63 452 aa14.16□□□□□ -0.14
VPS54-201ENST00000272322 CA11O75493 328 aa14.15□□□□□ -0.14
VPS54-201ENST00000272322 RBMXL2O75526 392 aaKnown RBP14.15□□□□□ -0.14
VPS54-201ENST00000272322 DVL1P1P54792 670 aaPredicted RBP14.15□□□□□ -0.14
VPS54-201ENST00000272322 THNSL2Q86YJ6 484 aa14.15□□□□□ -0.14
VPS54-201ENST00000272322 UBAC2Q8NBM4 344 aa14.15□□□□□ -0.14
VPS54-201ENST00000272322 OR1J1Q8NGS3 322 aa14.15□□□□□ -0.14
VPS54-201ENST00000272322 SPSB4Q96A44 273 aa14.15□□□□□ -0.14
VPS54-201ENST00000272322 BOD1Q96IK1 185 aa14.15□□□□□ -0.14
VPS54-201ENST00000272322 DECR2Q9NUI1 292 aa14.15□□□□□ -0.14
VPS54-201ENST00000272322 TMED3Q9Y3Q3 217 aa14.15□□□□□ -0.14
VPS54-201ENST00000272322 MUC6Q6W4X9 2439 aa14.15□□□□□ -0.14
VPS54-201ENST00000272322 KALRNO60229 2985 aa14.15□□□□□ -0.14
VPS54-201ENST00000272322 A0A1W2PPH5 198 aa14.15□□□□□ -0.14
VPS54-201ENST00000272322 PGLYRP1O75594 196 aaPredicted RBP14.15□□□□□ -0.14
VPS54-201ENST00000272322 GNG3P63215 75 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms