RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 HMGN4O00479 90 aa11.77□□□□□ -0.53
PRDM16-201ENST00000270722 RAC3P60763 192 aa11.77□□□□□ -0.53
PRDM16-201ENST00000270722 LINC00596Q86U02 117 aa11.77□□□□□ -0.53
PRDM16-201ENST00000270722 C5orf17Q8NAS9 161 aa11.77□□□□□ -0.53
PRDM16-201ENST00000270722 KBTBD11-OT1A0A1B0GTJ5 212 aa11.77□□□□□ -0.53
PRDM16-201ENST00000270722 UBE2L6O14933 153 aa11.77□□□□□ -0.53
PRDM16-201ENST00000270722 TECRQ9NZ01 308 aaKnown RBP11.77□□□□□ -0.53
PRDM16-201ENST00000270722 TWIST1Q15672 202 aa11.77□□□□□ -0.53
PRDM16-201ENST00000270722 SF3B5Q9BWJ5 86 aaKnown RBP11.77□□□□□ -0.53
PRDM16-201ENST00000270722 NXPH3O95157 252 aa11.77□□□□□ -0.53
PRDM16-201ENST00000270722 SMIM18P0DKX4 95 aa11.77□□□□□ -0.53
PRDM16-201ENST00000270722 ACVR1Q04771 509 aa11.77□□□□□ -0.53
PRDM16-201ENST00000270722 SIGLEC14Q08ET2 396 aa11.77□□□□□ -0.53
PRDM16-201ENST00000270722 NR2C2APQ86WQ0 139 aa11.77□□□□□ -0.53
PRDM16-201ENST00000270722 UNQ9370/PRO34162Q6UXP9 181 aa11.76□□□□□ -0.53
PRDM16-201ENST00000270722 NUBPLQ8TB37 319 aa11.76□□□□□ -0.53
PRDM16-201ENST00000270722 MRAP2Q96G30 205 aa11.76□□□□□ -0.53
PRDM16-201ENST00000270722 MIXL1Q9H2W2 232 aa11.76□□□□□ -0.53
PRDM16-201ENST00000270722 ESDP10768 282 aa11.76□□□□□ -0.53
PRDM16-201ENST00000270722 CEACAM6P40199 344 aa11.76□□□□□ -0.53
PRDM16-201ENST00000270722 FBLN7Q53RD9 439 aa11.76□□□□□ -0.53
PRDM16-201ENST00000270722 ZNF770Q6IQ21 691 aaPredicted RBP11.76□□□□□ -0.53
PRDM16-201ENST00000270722 DEFB124Q8NES8 71 aa11.76□□□□□ -0.53
PRDM16-201ENST00000270722 WDR89Q96FK6 387 aaPredicted RBP11.76□□□□□ -0.53
PRDM16-201ENST00000270722 DPH3Q96FX2 82 aa11.76□□□□□ -0.53
PRDM16-201ENST00000270722 FUT9Q9Y231 359 aa11.76□□□□□ -0.53
PRDM16-201ENST00000270722 SF3B6Q9Y3B4 125 aaKnown RBP11.76□□□□□ -0.53
PRDM16-201ENST00000270722 APOMO95445 188 aa11.76□□□□□ -0.53
PRDM16-201ENST00000270722 KLKB1P03952 638 aa11.76□□□□□ -0.53
PRDM16-201ENST00000270722 ZBTB34Q8NCN2 500 aa11.76□□□□□ -0.53
PRDM16-201ENST00000270722 VSIG4Q9Y279 399 aa11.76□□□□□ -0.53
PRDM16-201ENST00000270722 INSIG2Q9Y5U4 225 aa11.76□□□□□ -0.53
PRDM16-201ENST00000270722 SYNGR2O43760 224 aa11.76□□□□□ -0.53
PRDM16-201ENST00000270722 IAPPP10997 89 aa11.76□□□□□ -0.53
PRDM16-201ENST00000270722 MYPOPQ86VE0 399 aaPredicted RBP11.76□□□□□ -0.53
PRDM16-201ENST00000270722 DERL3Q96Q80 235 aa11.76□□□□□ -0.53
PRDM16-201ENST00000270722 ERGP11308 486 aa11.76□□□□□ -0.53
PRDM16-201ENST00000270722 ZNF658BQ4V348 819 aaPredicted RBP11.76□□□□□ -0.53
PRDM16-201ENST00000270722 SIGLEC11Q96RL6 698 aa11.76□□□□□ -0.53
PRDM16-201ENST00000270722 ANKRD36A6QL64 1941 aa11.76□□□□□ -0.53
PRDM16-201ENST00000270722 ADRA2AP08913 450 aa11.76□□□□□ -0.53
PRDM16-201ENST00000270722 GEMIN2O14893 280 aaKnown RBP11.76□□□□□ -0.53
PRDM16-201ENST00000270722 CDK5R1Q15078 307 aa11.76□□□□□ -0.53
PRDM16-201ENST00000270722 HINT3Q9NQE9 182 aaKnown RBP11.76□□□□□ -0.53
PRDM16-201ENST00000270722 C16orf97H3BN30 126 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 M0R296 226 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 HYAL1Q12794 435 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 PAPPA-AS1Q5QFB9 102 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 CRYGNQ8WXF5 182 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 SLC17A2O00624 439 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 PF4V1P10720 104 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 EVX1P49640 407 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 FIZ1Q96SL8 496 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 MAP1LC3AQ9H492 121 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 B9D1Q9UPM9 204 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 ONECUT2O95948 504 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 VDAC1P21796 283 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 WIPI1Q5MNZ9 446 aaPredicted RBP11.75□□□□□ -0.53
PRDM16-201ENST00000270722 FAM78BQ5VT40 261 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 DDB2Q92466 427 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 CBLN4Q9NTU7 201 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 SHPRHQ149N8 1683 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 NDUFA2O43678 99 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 CXCL10P02778 98 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 OR3A4PP47883 348 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 CLDN18P56856 261 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 WSB2Q9NYS7 404 aaPredicted RBP11.75□□□□□ -0.53
PRDM16-201ENST00000270722 MTCH2Q9Y6C9 303 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 B3GALT4O96024 378 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 ZNF345Q14585 488 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 CBLN2Q8IUK8 224 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 RNF224P0DH78 156 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 TSPOP30536 169 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 WNT3P56703 355 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 SLC35E3Q7Z769 313 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 LOXL4Q96JB6 756 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 PRSS50Q9UI38 385 aa11.75□□□□□ -0.53
PRDM16-201ENST00000270722 HLA-DRB1P01911 266 aa11.74□□□□□ -0.53
PRDM16-201ENST00000270722 CD40P25942 277 aa11.74□□□□□ -0.53
PRDM16-201ENST00000270722 SNAI3Q3KNW1 292 aa11.74□□□□□ -0.53
PRDM16-201ENST00000270722 OR10G8Q8NGN5 311 aa11.74□□□□□ -0.53
PRDM16-201ENST00000270722 LRRC61Q9BV99 259 aa11.74□□□□□ -0.53
PRDM16-201ENST00000270722 WDR13Q9H1Z4 485 aa11.74□□□□□ -0.53
PRDM16-201ENST00000270722 ORM2P19652 201 aa11.74□□□□□ -0.53
PRDM16-201ENST00000270722 COX7A1P24310 79 aa11.74□□□□□ -0.53
PRDM16-201ENST00000270722 TGIF2LYQ8IUE0 185 aa11.74□□□□□ -0.53
PRDM16-201ENST00000270722 TMPRSS2O15393 492 aa11.74□□□□□ -0.53
PRDM16-201ENST00000270722 HOXA6P31267 233 aa11.74□□□□□ -0.53
PRDM16-201ENST00000270722 NUTF2P61970 127 aaKnown RBP11.74□□□□□ -0.53
PRDM16-201ENST00000270722 COX20Q5RI15 118 aa11.74□□□□□ -0.53
PRDM16-201ENST00000270722 LDLRAD2Q5SZI1 272 aa11.74□□□□□ -0.53
PRDM16-201ENST00000270722 PIK3IP1Q96FE7 263 aa11.74□□□□□ -0.53
PRDM16-201ENST00000270722 RBKSQ9H477 322 aa11.74□□□□□ -0.53
PRDM16-201ENST00000270722 FAM181BA6NEQ2 426 aa11.74□□□□□ -0.53
PRDM16-201ENST00000270722 JAG1P78504 1218 aa11.74□□□□□ -0.53
PRDM16-201ENST00000270722 LGALSLQ3ZCW2 172 aaPredicted RBP11.74□□□□□ -0.53
PRDM16-201ENST00000270722 MPTX1A8MV57 137 aa11.74□□□□□ -0.53
PRDM16-201ENST00000270722 C2CD4DB7Z1M9 353 aa11.74□□□□□ -0.53
PRDM16-201ENST00000270722 MPZL1O95297 269 aa11.74□□□□□ -0.53
PRDM16-201ENST00000270722 SNRNP40Q96DI7 357 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms