RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 CDC6Q99741 560 aa12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 MALRD1Q5VYJ5 2156 aa12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 IGHV3-43A0A0B4J1X8 118 aa12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 PPIHO43447 177 aaKnown RBP12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 NEURL1O76050 574 aa12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 IGHV3-43DP0DP04 118 aa12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 HOXA6P31267 233 aa12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 HMGN3Q15651 99 aa12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 ZNF684Q5T5D7 378 aa12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 DOK3Q7L591 496 aa12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 CISD2Q8N5K1 135 aaKnown RBP12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 FAM173AQ9BQD7 235 aa12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 SLC26A1Q9H2B4 701 aa12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 IGKV1-9A0A0C4DH69 117 aa12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 IFNL4K9M1U5 179 aa12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 MFNGO00587 321 aa12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 CTDSPLO15194 276 aa12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 TFPI2P48307 235 aa12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 BPIFB3P59826 476 aa12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 ZSCAN4Q8NAM6 433 aaPredicted RBP12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 DMBX1Q8NFW5 382 aa12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 SNIP1Q8TAD8 396 aaKnown RBP12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 RNF166Q96A37 237 aaPredicted RBP12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 SLC25A21Q9BQT8 299 aaPredicted RBP12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 HINT2Q9BX68 163 aa12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 RAB22AQ9UL26 194 aa12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 C14orf166Q9Y224 244 aaKnown RBP12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 TIMM10BQ9Y5J6 103 aa12.23□□□□□ -0.45
TNFRSF11A-201ENST00000269485 SIAH2O43255 324 aa12.22□□□□□ -0.45
TNFRSF11A-201ENST00000269485 LILRA1O75019 489 aa12.22□□□□□ -0.45
TNFRSF11A-201ENST00000269485 TMEM11P17152 192 aa12.22□□□□□ -0.45
TNFRSF11A-201ENST00000269485 OR11L1Q8NGX0 322 aa12.22□□□□□ -0.45
TNFRSF11A-201ENST00000269485 SLC5A7Q9GZV3 580 aa12.22□□□□□ -0.45
TNFRSF11A-201ENST00000269485 TUBA4BQ9H853 241 aa12.22□□□□□ -0.45
TNFRSF11A-201ENST00000269485 GPR35Q9HC97 309 aa12.22□□□□□ -0.45
TNFRSF11A-201ENST00000269485 CACFD1Q9UGQ2 172 aa12.22□□□□□ -0.45
TNFRSF11A-201ENST00000269485 LRRC3CA6NJW4 275 aa12.22□□□□□ -0.45
TNFRSF11A-201ENST00000269485 MARCH11A6NNE9 402 aa12.22□□□□□ -0.45
TNFRSF11A-201ENST00000269485 NUDT19A8MXV4 375 aa12.22□□□□□ -0.45
TNFRSF11A-201ENST00000269485 IGHV2-5P01817 119 aa12.22□□□□□ -0.45
TNFRSF11A-201ENST00000269485 CPEB3Q8NE35 698 aaKnown RBP12.22□□□□□ -0.45
TNFRSF11A-201ENST00000269485 PPP1R14DQ9NXH3 145 aa12.22□□□□□ -0.45
TNFRSF11A-201ENST00000269485 VSIG4Q9Y279 399 aa12.22□□□□□ -0.45
TNFRSF11A-201ENST00000269485 WDR1O75083 606 aa12.22□□□□□ -0.45
TNFRSF11A-201ENST00000269485 DFFBO76075 338 aa12.22□□□□□ -0.45
TNFRSF11A-201ENST00000269485 FCGR2CP31995 323 aa12.22□□□□□ -0.45
TNFRSF11A-201ENST00000269485 SPINK9Q5DT21 86 aa12.22□□□□□ -0.45
TNFRSF11A-201ENST00000269485 UNQ9370/PRO34162Q6UXP9 181 aa12.22□□□□□ -0.45
TNFRSF11A-201ENST00000269485 SSX7Q7RTT5 188 aa12.22□□□□□ -0.45
TNFRSF11A-201ENST00000269485 CALHM1Q8IU99 346 aa12.22□□□□□ -0.45
TNFRSF11A-201ENST00000269485 EXTL1Q92935 676 aa12.22□□□□□ -0.45
TNFRSF11A-201ENST00000269485 HIVEP3Q5T1R4 2406 aa12.21□□□□□ -0.45
TNFRSF11A-201ENST00000269485 CDIPTO14735 213 aa12.21□□□□□ -0.45
TNFRSF11A-201ENST00000269485 SP1P08047 785 aa12.21□□□□□ -0.45
TNFRSF11A-201ENST00000269485 IL2RGP31785 369 aa12.21□□□□□ -0.45
TNFRSF11A-201ENST00000269485 CYCSP99999 105 aaKnown RBP12.21□□□□□ -0.45
TNFRSF11A-201ENST00000269485 ENDOGQ14249 297 aaKnown RBP12.21□□□□□ -0.45
TNFRSF11A-201ENST00000269485 CST9LP1Q5W188 147 aa12.21□□□□□ -0.45
TNFRSF11A-201ENST00000269485 RPRMLQ8N4K4 120 aa12.21□□□□□ -0.45
TNFRSF11A-201ENST00000269485 COMMD1Q8N668 190 aa12.21□□□□□ -0.45
TNFRSF11A-201ENST00000269485 HS3ST6Q96QI5 342 aa12.21□□□□□ -0.45
TNFRSF11A-201ENST00000269485 OR2J1Q9GZK6 312 aa12.21□□□□□ -0.45
TNFRSF11A-201ENST00000269485 TRBV5-5A0A0J9YX44 114 aa12.21□□□□□ -0.46
TNFRSF11A-201ENST00000269485 CD74P04233 296 aa12.21□□□□□ -0.46
TNFRSF11A-201ENST00000269485 MMP16P51512 607 aa12.21□□□□□ -0.46
TNFRSF11A-201ENST00000269485 PPA1Q15181 289 aa12.21□□□□□ -0.46
TNFRSF11A-201ENST00000269485 PLAC9Q5JTB6 97 aa12.21□□□□□ -0.46
TNFRSF11A-201ENST00000269485 RPUSD3Q6P087 351 aaKnown RBP12.21□□□□□ -0.46
TNFRSF11A-201ENST00000269485 SLC35G3Q8N808 338 aa12.21□□□□□ -0.46
TNFRSF11A-201ENST00000269485 ZIC4Q8N9L1 334 aa12.21□□□□□ -0.46
TNFRSF11A-201ENST00000269485 HAS2Q92819 552 aa12.21□□□□□ -0.46
TNFRSF11A-201ENST00000269485 LYZL4Q96KX0 146 aa12.21□□□□□ -0.46
TNFRSF11A-201ENST00000269485 IGKV1D-8A0A087WSZ0 117 aa12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 B4E171 279 aa12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 PHF1O43189 567 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 SYNGR1O43759 233 aa12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 TSPAN7P41732 249 aa12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 VWA1Q6PCB0 445 aa12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 TP53TG5Q9Y2B4 290 aa12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 UBE2J1Q9Y385 318 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 F8VVB4 439 aa12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 F8VWA3 439 aa12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 GRB2P62993 217 aaKnown RBP12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 RAB32Q13637 225 aa12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 FAM201AQ5SY85 155 aa12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 SLC25A47Q6Q0C1 308 aa12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 LYG2Q86SG7 212 aa12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 PAQR4Q8N4S7 273 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 NEU1Q99519 415 aa12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 RARRES2Q99969 163 aa12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 C2orf88Q9BSF0 95 aa12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 CRIM1Q9NZV1 1036 aa12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 MEMO1Q9Y316 297 aa12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 TRAPPC2LH3BP13 241 aa12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 DHRS3O75911 302 aa12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 VAMP5O95183 116 aa12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 IFI6P09912 130 aa12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 PGA5P0DJD9 388 aa12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 CD200P41217 278 aa12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 EDDM3BP56851 147 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms