RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 SH2D1BO14796 132 aa17.36■□□□□ 0.37
LYSMD2-201ENST00000267838 ATXN7O15265 892 aaPredicted RBP17.36■□□□□ 0.37
LYSMD2-201ENST00000267838 PTBP3O95758 552 aaKnown RBP17.36■□□□□ 0.37
LYSMD2-201ENST00000267838 APOC3P02656 99 aa17.36■□□□□ 0.37
LYSMD2-201ENST00000267838 TPT1P13693 172 aaKnown RBP17.36■□□□□ 0.37
LYSMD2-201ENST00000267838 ECI1P42126 302 aa17.36■□□□□ 0.37
LYSMD2-201ENST00000267838 SURF2Q15527 256 aaPredicted RBP17.36■□□□□ 0.37
LYSMD2-201ENST00000267838 DHRS11Q6UWP2 260 aa17.36■□□□□ 0.37
LYSMD2-201ENST00000267838 MS4A7Q9GZW8 240 aaPredicted RBP17.36■□□□□ 0.37
LYSMD2-201ENST00000267838 RAB18Q9NP72 206 aa17.36■□□□□ 0.37
LYSMD2-201ENST00000267838 NGBQ9NPG2 151 aa17.36■□□□□ 0.37
LYSMD2-201ENST00000267838 C1orf123Q9NWV4 160 aa17.36■□□□□ 0.37
LYSMD2-201ENST00000267838 PCNX1Q96RV3 2341 aa17.36■□□□□ 0.37
LYSMD2-201ENST00000267838 TEX13DA0A0J9YY54 714 aaPredicted RBP17.35■□□□□ 0.37
LYSMD2-201ENST00000267838 FAM90A27PA6NNH2 459 aa17.35■□□□□ 0.37
LYSMD2-201ENST00000267838 NUDT19A8MXV4 375 aa17.35■□□□□ 0.37
LYSMD2-201ENST00000267838 SLC33A1O00400 549 aaPredicted RBP17.35■□□□□ 0.37
LYSMD2-201ENST00000267838 WNT9BO14905 357 aa17.35■□□□□ 0.37
LYSMD2-201ENST00000267838 SFT2D2O95562 160 aa17.35■□□□□ 0.37
LYSMD2-201ENST00000267838 GLRA1P23415 457 aa17.35■□□□□ 0.37
LYSMD2-201ENST00000267838 SERPINF1P36955 418 aa17.35■□□□□ 0.37
LYSMD2-201ENST00000267838 FBXL19-AS1Q494R0 122 aa17.35■□□□□ 0.37
LYSMD2-201ENST00000267838 ACP7Q6ZNF0 438 aa17.35■□□□□ 0.37
LYSMD2-201ENST00000267838 MRPL30Q8TCC3 161 aaKnown RBP17.35■□□□□ 0.37
LYSMD2-201ENST00000267838 AIFM2Q9BRQ8 373 aa17.35■□□□□ 0.37
LYSMD2-201ENST00000267838 TRBV6-6A0A0A6YYG2 114 aa17.35■□□□□ 0.37
LYSMD2-201ENST00000267838 MDH2P40926 338 aaKnown RBP17.35■□□□□ 0.37
LYSMD2-201ENST00000267838 ADORA2A-AS1P86434 159 aa17.35■□□□□ 0.37
LYSMD2-201ENST00000267838 DCUN1D4Q92564 292 aa17.35■□□□□ 0.37
LYSMD2-201ENST00000267838 MARC2Q969Z3 335 aa17.35■□□□□ 0.37
LYSMD2-201ENST00000267838 RTBDNQ9BSG5 229 aaPredicted RBP17.35■□□□□ 0.37
LYSMD2-201ENST00000267838 LIME1Q9H400 295 aa17.35■□□□□ 0.37
LYSMD2-201ENST00000267838 PRELID1Q9Y255 219 aa17.35■□□□□ 0.37
LYSMD2-201ENST00000267838 ATP23Q9Y6H3 246 aa17.35■□□□□ 0.37
LYSMD2-201ENST00000267838 POLEQ07864 2286 aa17.35■□□□□ 0.37
LYSMD2-201ENST00000267838 PKD1L2Q7Z442 2459 aa17.34■□□□□ 0.37
LYSMD2-201ENST00000267838 MPTX1A8MV57 137 aa17.34■□□□□ 0.37
LYSMD2-201ENST00000267838 SPRY3O43610 288 aa17.34■□□□□ 0.37
LYSMD2-201ENST00000267838 HAND1O96004 215 aa17.34■□□□□ 0.37
LYSMD2-201ENST00000267838 PGAM2P15259 253 aa17.34■□□□□ 0.37
LYSMD2-201ENST00000267838 BEX5Q5H9J7 111 aa17.34■□□□□ 0.37
LYSMD2-201ENST00000267838 LRRC29Q8WV35 223 aa17.34■□□□□ 0.37
LYSMD2-201ENST00000267838 TMEM230Q96A57 120 aa17.34■□□□□ 0.37
LYSMD2-201ENST00000267838 PIK3IP1Q96FE7 263 aa17.34■□□□□ 0.37
LYSMD2-201ENST00000267838 MEGF10Q96KG7 1140 aa17.34■□□□□ 0.37
LYSMD2-201ENST00000267838 OR2V2Q96R30 315 aa17.34■□□□□ 0.37
LYSMD2-201ENST00000267838 DECR2Q9NUI1 292 aa17.34■□□□□ 0.37
LYSMD2-201ENST00000267838 OR14J1Q9UGF5 321 aa17.34■□□□□ 0.37
LYSMD2-201ENST00000267838 SPTA1P02549 2419 aa17.34■□□□□ 0.37
LYSMD2-201ENST00000267838 C13orf42A0A1B0GVH6 325 aa17.33■□□□□ 0.37
LYSMD2-201ENST00000267838 PI3P19957 117 aa17.33■□□□□ 0.37
LYSMD2-201ENST00000267838 SHEQ5VZ18 495 aa17.33■□□□□ 0.37
LYSMD2-201ENST00000267838 RNASE6Q93091 150 aaKnown RBP17.33■□□□□ 0.37
LYSMD2-201ENST00000267838 TREM2Q9NZC2 230 aa17.33■□□□□ 0.37
LYSMD2-201ENST00000267838 ITPR1Q14643 2758 aa17.33■□□□□ 0.36
LYSMD2-201ENST00000267838 KIR2DS1A0A191URI9 304 aa17.33■□□□□ 0.36
LYSMD2-201ENST00000267838 NKX2-6A6NCS4 301 aa17.33■□□□□ 0.36
LYSMD2-201ENST00000267838 TRDCB7Z8K6 153 aa17.33■□□□□ 0.36
LYSMD2-201ENST00000267838 TOR1AO14656 332 aa17.33■□□□□ 0.36
LYSMD2-201ENST00000267838 FGF16O43320 207 aa17.33■□□□□ 0.36
LYSMD2-201ENST00000267838 ZNF205O95201 554 aa17.33■□□□□ 0.36
LYSMD2-201ENST00000267838 PET100P0DJ07 73 aa17.33■□□□□ 0.36
LYSMD2-201ENST00000267838 FCGR2CP31995 323 aa17.33■□□□□ 0.36
LYSMD2-201ENST00000267838 GLP1RP43220 463 aa17.33■□□□□ 0.36
LYSMD2-201ENST00000267838 KIR2DS4P43632 304 aa17.33■□□□□ 0.36
LYSMD2-201ENST00000267838 HOXA4Q00056 320 aaPredicted RBP17.33■□□□□ 0.36
LYSMD2-201ENST00000267838 KIR2DS1Q14954 304 aa17.33■□□□□ 0.36
LYSMD2-201ENST00000267838 SMIM21Q3B7S5 101 aa17.33■□□□□ 0.36
LYSMD2-201ENST00000267838 IGSF11Q5DX21 431 aa17.33■□□□□ 0.36
LYSMD2-201ENST00000267838 C20orf204Q6ZNR8 217 aa17.33■□□□□ 0.36
LYSMD2-201ENST00000267838 BPIFCQ8NFQ6 507 aa17.33■□□□□ 0.36
LYSMD2-201ENST00000267838 OR5T2Q8NGG2 359 aa17.33■□□□□ 0.36
LYSMD2-201ENST00000267838 OR10Z1Q8NGY1 313 aa17.33■□□□□ 0.36
LYSMD2-201ENST00000267838 LRRC46Q96FV0 321 aa17.33■□□□□ 0.36
LYSMD2-201ENST00000267838 C14orf166Q9Y224 244 aaKnown RBP17.33■□□□□ 0.36
LYSMD2-201ENST00000267838 CHD3Q12873 2000 aaKnown RBP17.32■□□□□ 0.36
LYSMD2-201ENST00000267838 KNG1P01042 644 aa17.32■□□□□ 0.36
LYSMD2-201ENST00000267838 LYL1P12980 280 aa17.32■□□□□ 0.36
LYSMD2-201ENST00000267838 CEBPDP49716 269 aaPredicted RBP17.32■□□□□ 0.36
LYSMD2-201ENST00000267838 SPRNQ5BIV9 151 aa17.32■□□□□ 0.36
LYSMD2-201ENST00000267838 ZNF880Q6PDB4 577 aa17.32■□□□□ 0.36
LYSMD2-201ENST00000267838 PLPPR1Q8TBJ4 325 aa17.32■□□□□ 0.36
LYSMD2-201ENST00000267838 ESRP2Q9H6T0 727 aaKnown RBP17.32■□□□□ 0.36
LYSMD2-201ENST00000267838 ATRXP46100 2492 aa17.32■□□□□ 0.36
LYSMD2-201ENST00000267838 H7C1Q1 480 aa17.31■□□□□ 0.36
LYSMD2-201ENST00000267838 SCTP09683 121 aa17.31■□□□□ 0.36
LYSMD2-201ENST00000267838 LMO1P25800 156 aa17.31■□□□□ 0.36
LYSMD2-201ENST00000267838 DEFA5Q01523 94 aa17.31■□□□□ 0.36
LYSMD2-201ENST00000267838 ADIPOQQ15848 244 aa17.31■□□□□ 0.36
LYSMD2-201ENST00000267838 NCMAPQ5T1S8 102 aa17.31■□□□□ 0.36
LYSMD2-201ENST00000267838 ADAM5Q6NVV9 412 aa17.31■□□□□ 0.36
LYSMD2-201ENST00000267838 PRSS54Q6PEW0 395 aa17.31■□□□□ 0.36
LYSMD2-201ENST00000267838 ITLN1Q8WWA0 313 aa17.31■□□□□ 0.36
LYSMD2-201ENST00000267838 ZDHHC8Q9ULC8 765 aa17.31■□□□□ 0.36
LYSMD2-201ENST00000267838 PCDHB10Q9UN67 800 aa17.31■□□□□ 0.36
LYSMD2-201ENST00000267838 NBEAQ8NFP9 2946 aa17.31■□□□□ 0.36
LYSMD2-201ENST00000267838 IGHV1-46P01743 117 aa17.3■□□□□ 0.36
LYSMD2-201ENST00000267838 CTSDP07339 412 aaPredicted RBP17.3■□□□□ 0.36
LYSMD2-201ENST00000267838 OR4A8P0C604 315 aa17.3■□□□□ 0.36
LYSMD2-201ENST00000267838 CFHR2P36980 270 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms