RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 DPCDQ9BVM2 203 aaPredicted RBP7.74□□□□□ -1.17
VPS41-201ENST00000265745 FAM192AQ9GZU8 254 aa7.74□□□□□ -1.17
VPS41-201ENST00000265745 PCDHB16Q9NRJ7 776 aa7.74□□□□□ -1.17
VPS41-201ENST00000265745 IDI2-AS1Q9NZ38 188 aa7.74□□□□□ -1.17
VPS41-201ENST00000265745 IL36GQ9NZH8 169 aa7.74□□□□□ -1.17
VPS41-201ENST00000265745 CLEC2DQ9UHP7 191 aa7.74□□□□□ -1.17
VPS41-201ENST00000265745 ING4Q9UNL4 249 aa7.74□□□□□ -1.17
VPS41-201ENST00000265745 DIMT1Q9UNQ2 313 aaKnown RBP7.74□□□□□ -1.17
VPS41-201ENST00000265745 ST3GAL6Q9Y274 331 aa7.74□□□□□ -1.17
VPS41-201ENST00000265745 TRAV39A0A0B4J263 110 aa7.73□□□□□ -1.17
VPS41-201ENST00000265745 TRBV5-5A0A0J9YX44 114 aa7.73□□□□□ -1.17
VPS41-201ENST00000265745 A0A1W2PRX2 142 aa7.73□□□□□ -1.17
VPS41-201ENST00000265745 TCRBV4S1A1TA0A5B7 111 aa7.73□□□□□ -1.17
VPS41-201ENST00000265745 IRGMA1A4Y4 181 aa7.73□□□□□ -1.17
VPS41-201ENST00000265745 SH2D7A6NKC9 451 aaPredicted RBP7.73□□□□□ -1.17
VPS41-201ENST00000265745 GEMIN2O14893 280 aaKnown RBP7.73□□□□□ -1.17
VPS41-201ENST00000265745 GPX5O75715 221 aa7.73□□□□□ -1.17
VPS41-201ENST00000265745 OR7C1O76099 320 aaPredicted RBP7.73□□□□□ -1.17
VPS41-201ENST00000265745 LALBAP00709 142 aa7.73□□□□□ -1.17
VPS41-201ENST00000265745 IGFBP3P17936 291 aaPredicted RBP7.73□□□□□ -1.17
VPS41-201ENST00000265745 GZMHP20718 246 aa7.73□□□□□ -1.17
VPS41-201ENST00000265745 BDKRB2P30411 391 aa7.73□□□□□ -1.17
VPS41-201ENST00000265745 RBM11P57052 281 aaKnown RBP7.73□□□□□ -1.17
VPS41-201ENST00000265745 PPP3R1P63098 170 aa7.73□□□□□ -1.17
VPS41-201ENST00000265745 MADCAM1Q13477 382 aa7.73□□□□□ -1.17
VPS41-201ENST00000265745 DIAPH2-AS1Q14236 149 aa7.73□□□□□ -1.17
VPS41-201ENST00000265745 DDI2Q5TDH0 399 aa7.73□□□□□ -1.17
VPS41-201ENST00000265745 C10orf99Q6UWK7 81 aa7.73□□□□□ -1.17
VPS41-201ENST00000265745 Q6ZPA2 131 aa7.73□□□□□ -1.17
VPS41-201ENST00000265745 SLC16A12Q6ZSM3 486 aa7.73□□□□□ -1.17
VPS41-201ENST00000265745 OSR2Q8N2R0 312 aa7.73□□□□□ -1.17
VPS41-201ENST00000265745 ZNF485Q8NCK3 441 aa7.73□□□□□ -1.17
VPS41-201ENST00000265745 OR10A7Q8NGE5 316 aa7.73□□□□□ -1.17
VPS41-201ENST00000265745 OR52N1Q8NH53 320 aa7.73□□□□□ -1.17
VPS41-201ENST00000265745 ORAI1Q96D31 301 aa7.73□□□□□ -1.17
VPS41-201ENST00000265745 SMIM19Q96E16 107 aa7.73□□□□□ -1.17
VPS41-201ENST00000265745 METTL9Q9H1A3 318 aa7.73□□□□□ -1.17
VPS41-201ENST00000265745 PAK1IP1Q9NWT1 392 aaPredicted RBP7.73□□□□□ -1.17
VPS41-201ENST00000265745 EXOSC1Q9Y3B2 195 aaKnown RBP7.73□□□□□ -1.17
VPS41-201ENST00000265745 AMMECR1Q9Y4X0 333 aaPredicted RBP7.73□□□□□ -1.17
VPS41-201ENST00000265745 TSSC4Q9Y5U2 329 aaPredicted RBP7.73□□□□□ -1.17
VPS41-201ENST00000265745 A0A1W2PPI3 338 aa7.72□□□□□ -1.17
VPS41-201ENST00000265745 ZNF780AO75290 641 aaPredicted RBP7.72□□□□□ -1.17
VPS41-201ENST00000265745 CSTBP04080 98 aaKnown RBP7.72□□□□□ -1.17
VPS41-201ENST00000265745 SNRNP70P08621 437 aaKnown RBP7.72□□□□□ -1.17
VPS41-201ENST00000265745 MYL12AP19105 171 aa7.72□□□□□ -1.17
VPS41-201ENST00000265745 SSTR5P35346 364 aa7.72□□□□□ -1.17
VPS41-201ENST00000265745 RPS11P62280 158 aaKnown RBP eCLIP7.72□□□□□ -1.17
VPS41-201ENST00000265745 ADARB1P78563 741 aaKnown RBP7.72□□□□□ -1.17
VPS41-201ENST00000265745 RIPK1Q13546 671 aa7.72□□□□□ -1.17
VPS41-201ENST00000265745 LTC4SQ16873 150 aa7.72□□□□□ -1.17
VPS41-201ENST00000265745 LRRC36Q1X8D7 754 aa7.72□□□□□ -1.17
VPS41-201ENST00000265745 TTC23Q5W5X9 447 aa7.72□□□□□ -1.17
VPS41-201ENST00000265745 DRAM1Q8N682 238 aa7.72□□□□□ -1.17
VPS41-201ENST00000265745 OR13C5Q8NGS8 318 aa7.72□□□□□ -1.17
VPS41-201ENST00000265745 OR56B4Q8NH76 319 aa7.72□□□□□ -1.17
VPS41-201ENST00000265745 SGCDQ92629 289 aa7.72□□□□□ -1.17
VPS41-201ENST00000265745 GGHQ92820 318 aa7.72□□□□□ -1.17
VPS41-201ENST00000265745 MYDGFQ969H8 173 aa7.72□□□□□ -1.17
VPS41-201ENST00000265745 TOMM40LQ969M1 308 aa7.72□□□□□ -1.17
VPS41-201ENST00000265745 PHF21AQ96BD5 680 aa7.72□□□□□ -1.17
VPS41-201ENST00000265745 TMEM80Q96HE8 168 aa7.72□□□□□ -1.17
VPS41-201ENST00000265745 PGLYRP3Q96LB9 341 aa7.72□□□□□ -1.17
VPS41-201ENST00000265745 ZNF184Q99676 751 aaPredicted RBP7.72□□□□□ -1.17
VPS41-201ENST00000265745 NECAP2Q9NVZ3 263 aa7.72□□□□□ -1.17
VPS41-201ENST00000265745 CHCHD3Q9NX63 227 aaKnown RBP7.72□□□□□ -1.17
VPS41-201ENST00000265745 MOB4Q9Y3A3 225 aa7.72□□□□□ -1.17
VPS41-201ENST00000265745 HSPE1-MOB4S4R3N1 261 aa7.72□□□□□ -1.17
VPS41-201ENST00000265745 TET2Q6N021 2002 aaPredicted RBP7.71□□□□□ -1.17
VPS41-201ENST00000265745 TRBV5-7A0A0A0MS05 114 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 A0A1W2PP11 408 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 TMEM30CPA0ZSE6 113 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 MAGEA13PA6NCF6 341 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 C15orf65H3BRN8 121 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 SCGB1D2O95969 90 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 MT-ND4P03905 459 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 PF4V1P10720 104 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 GTF2F2P13984 249 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 IGLL1P15814 213 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 SERPINA2P20848 420 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 RAB7AP51149 207 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 ST3GAL4Q11206 333 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 EBI3Q14213 229 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 HNF4GQ14541 408 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 MPV17LQ2QL34 196 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 Q499Y3 187 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 SLC22A6Q4U2R8 563 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 YIF1BQ5BJH7 314 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 C9orf152Q5JTZ5 239 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 LAIR2Q6ISS4 152 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 LINC00596Q86U02 117 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 OR8H3Q8N146 312 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 MFSD4AQ8N468 514 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 DHRSXQ8N5I4 330 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 PACRGLQ8N7B6 248 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 SETD9Q8NE22 299 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 OR4X2Q8NGF9 303 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 OR10X1Q8NGY0 326 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 CYGBQ8WWM9 190 aa7.71□□□□□ -1.18
VPS41-201ENST00000265745 S100A13Q99584 98 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms