RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 CLDN15P56746 228 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 TESK1Q15569 626 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 ADIRFQ15847 76 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 WDR25Q64LD2 544 aaPredicted RBP10.63□□□□□ -0.71
CHMP3-201ENST00000263856 GNPNAT1Q96EK6 184 aaPredicted RBP10.63□□□□□ -0.71
CHMP3-201ENST00000263856 NOSIPQ9Y314 301 aaKnown RBP10.63□□□□□ -0.71
CHMP3-201ENST00000263856 MUC3AQ02505 3323 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 GJE1A6NN92 205 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 DKK1O94907 266 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 TRGC1P0CF51 173 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 VDAC1P21796 283 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 SPANXN5Q5MJ07 72 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 PSMF1Q92530 271 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 HIST1H2AAQ96QV6 131 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 SSX3Q99909 188 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 PRRG4Q9BZD6 226 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 GPR35Q9HC97 309 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 CACNG5Q9UF02 275 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 GAB2Q9UQC2 676 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 ADAMTS20P59510 1910 aa10.62□□□□□ -0.71
CHMP3-201ENST00000263856 WDR1O75083 606 aa10.62□□□□□ -0.71
CHMP3-201ENST00000263856 MRPL33O75394 65 aaKnown RBP10.62□□□□□ -0.71
CHMP3-201ENST00000263856 NGFP01138 241 aa10.62□□□□□ -0.71
CHMP3-201ENST00000263856 CXCL12P48061 93 aa10.62□□□□□ -0.71
CHMP3-201ENST00000263856 UCP2P55851 309 aa10.62□□□□□ -0.71
CHMP3-201ENST00000263856 HLA-DRB3P79483 266 aa10.62□□□□□ -0.71
CHMP3-201ENST00000263856 BEND4Q6ZU67 534 aa10.62□□□□□ -0.71
CHMP3-201ENST00000263856 MKXQ8IYA7 352 aa10.62□□□□□ -0.71
CHMP3-201ENST00000263856 INTS12Q96CB8 462 aaKnown RBP10.62□□□□□ -0.71
CHMP3-201ENST00000263856 FAM210BQ96KR6 192 aa10.62□□□□□ -0.71
CHMP3-201ENST00000263856 ATP5SQ99766 215 aa10.62□□□□□ -0.71
CHMP3-201ENST00000263856 COL6A3P12111 3177 aa10.62□□□□□ -0.71
CHMP3-201ENST00000263856 NCKAP5O14513 1909 aa10.62□□□□□ -0.71
CHMP3-201ENST00000263856 NBEAQ8NFP9 2946 aa10.62□□□□□ -0.71
CHMP3-201ENST00000263856 ARGFXA6NJG6 315 aa10.62□□□□□ -0.71
CHMP3-201ENST00000263856 PGA5P0DJD9 388 aa10.62□□□□□ -0.71
CHMP3-201ENST00000263856 BMP5P22003 454 aa10.62□□□□□ -0.71
CHMP3-201ENST00000263856 ARF1P84077 181 aaKnown RBP10.62□□□□□ -0.71
CHMP3-201ENST00000263856 GAMTQ14353 236 aa10.62□□□□□ -0.71
CHMP3-201ENST00000263856 LYSMD4Q5XG99 296 aa10.62□□□□□ -0.71
CHMP3-201ENST00000263856 CLDND2Q8NHS1 167 aa10.62□□□□□ -0.71
CHMP3-201ENST00000263856 CPT1CQ8TCG5 803 aa10.62□□□□□ -0.71
CHMP3-201ENST00000263856 FRZBQ92765 325 aa10.62□□□□□ -0.71
CHMP3-201ENST00000263856 Q9N2K0 584 aa10.62□□□□□ -0.71
CHMP3-201ENST00000263856 RPRMQ9NS64 109 aa10.62□□□□□ -0.71
CHMP3-201ENST00000263856 UFSP2Q9NUQ7 469 aa10.62□□□□□ -0.71
CHMP3-201ENST00000263856 SLC34A2O95436 690 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 S100GP29377 79 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 UCP3P55916 312 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 STARD6P59095 220 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 EIF3IQ13347 325 aaKnown RBP10.61□□□□□ -0.71
CHMP3-201ENST00000263856 KHDC3LQ587J8 217 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 TCEAL6Q6IPX3 200 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 GPR146Q96CH1 333 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 RPUSD4Q96CM3 377 aaKnown RBP10.61□□□□□ -0.71
CHMP3-201ENST00000263856 MEGF10Q96KG7 1140 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 ZNF552Q9H707 407 aaPredicted RBP10.61□□□□□ -0.71
CHMP3-201ENST00000263856 GFOD1Q9NXC2 390 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 CD300LBA8K4G0 201 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 PATE3B3GLJ2 98 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 TUSC2O75896 110 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 FOLR3P41439 243 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 PCBD1P61457 104 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 C20orf204Q6ZNR8 217 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 FOXL2NBQ6ZUU3 175 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 ODF3L1Q8IXM7 274 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 C1orf87Q8N0U7 546 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 OR10J5Q8NHC4 309 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 DUSP23Q9BVJ7 150 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 MTCH1Q9NZJ7 389 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 OR1A1Q9P1Q5 309 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 GTF3C1Q12789 2109 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 IGKV1-6A0A0C4DH72 117 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 UBE2L5PA0A1B0GUS4 154 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 TOX3O15405 576 aaPredicted RBP10.61□□□□□ -0.71
CHMP3-201ENST00000263856 PGLYRP1O75594 196 aaPredicted RBP10.61□□□□□ -0.71
CHMP3-201ENST00000263856 EXT1Q16394 746 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 C3AR1Q16581 482 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 ZDHHC23Q8IYP9 409 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 OR2V1Q8NHB1 315 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 DNASE2BQ8WZ79 361 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 MALSU1Q96EH3 234 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 SIGLEC12Q96PQ1 595 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 CABLES2Q9BTV7 478 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 TAAR3PQ9P1P4 343 aa10.61□□□□□ -0.71
CHMP3-201ENST00000263856 ZNF716A6NP11 495 aa10.6□□□□□ -0.71
CHMP3-201ENST00000263856 SIRPB1O00241 398 aa10.6□□□□□ -0.71
CHMP3-201ENST00000263856 RBMXL2O75526 392 aaKnown RBP10.6□□□□□ -0.71
CHMP3-201ENST00000263856 HBE1P02100 147 aa10.6□□□□□ -0.71
CHMP3-201ENST00000263856 TAS2R30P59541 319 aa10.6□□□□□ -0.71
CHMP3-201ENST00000263856 SPINK14Q6IE38 97 aa10.6□□□□□ -0.71
CHMP3-201ENST00000263856 FAM185AQ8N0U4 392 aa10.6□□□□□ -0.71
CHMP3-201ENST00000263856 CCDC54Q8NEL0 328 aa10.6□□□□□ -0.71
CHMP3-201ENST00000263856 IMMP1LQ96LU5 166 aa10.6□□□□□ -0.71
CHMP3-201ENST00000263856 PSENENQ9NZ42 101 aa10.6□□□□□ -0.71
CHMP3-201ENST00000263856 FAM166BA8MTA8 275 aa10.6□□□□□ -0.71
CHMP3-201ENST00000263856 PMELP40967 661 aa10.6□□□□□ -0.71
CHMP3-201ENST00000263856 KDF1Q8NAX2 398 aaPredicted RBP10.6□□□□□ -0.71
CHMP3-201ENST00000263856 AGBL5Q8NDL9 886 aa10.6□□□□□ -0.71
CHMP3-201ENST00000263856 DMRT1Q9Y5R6 373 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms