RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 OR4F5Q8NH21 305 aa13.98□□□□□ -0.17
PDZRN3-201ENST00000263666 CT55Q8WUE5 264 aa13.98□□□□□ -0.17
PDZRN3-201ENST00000263666 WBP1Q96G27 269 aa13.98□□□□□ -0.17
PDZRN3-201ENST00000263666 OR4F4Q96R69 305 aa13.98□□□□□ -0.17
PDZRN3-201ENST00000263666 TRANK1O15050 2925 aa13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 FGF16O43320 207 aa13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 HBE1P02100 147 aa13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 S100A8P05109 93 aa13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 RBM11P57052 281 aaKnown RBP13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 IL13RA2Q14627 380 aa13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 TMPRSS7Q7RTY8 843 aa13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 TMEM178AQ8NBL3 297 aa13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 SSX3Q99909 188 aa13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 ZNF665Q9H7R5 613 aa13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 SERPINA7P05543 415 aa13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 CELA3AP09093 270 aa13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 FAM157CP0CG43 387 aa13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 SUCLG1P53597 346 aaKnown RBP13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 MRPL49Q13405 166 aaKnown RBP13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 BTNL3Q6UXE8 466 aa13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 CLEC18AA5D8T8 446 aa13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 SNCAP37840 140 aa13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 CLEC18CQ8NCF0 446 aa13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 TMEM37Q8WXS4 190 aa13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 GNPNAT1Q96EK6 184 aaPredicted RBP13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 ADGRG7Q96K78 797 aa13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 SNX22Q96L94 193 aa13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 GNG12Q9UBI6 72 aa13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 MUC6Q6W4X9 2439 aa13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 VPS13AQ96RL7 3174 aa13.97□□□□□ -0.17
PDZRN3-201ENST00000263666 WNK2Q9Y3S1 2297 aa13.96□□□□□ -0.17
PDZRN3-201ENST00000263666 IGKV1-12A0A0C4DH73 117 aa13.96□□□□□ -0.17
PDZRN3-201ENST00000263666 F8VVB4 439 aa13.96□□□□□ -0.17
PDZRN3-201ENST00000263666 F8VWA3 439 aa13.96□□□□□ -0.17
PDZRN3-201ENST00000263666 ZIC3O60481 467 aa13.96□□□□□ -0.17
PDZRN3-201ENST00000263666 IGKV1D-12P01611 117 aa13.96□□□□□ -0.17
PDZRN3-201ENST00000263666 EIF2S3P41091 472 aaKnown RBP13.96□□□□□ -0.17
PDZRN3-201ENST00000263666 HBG1P69891 147 aa13.96□□□□□ -0.17
PDZRN3-201ENST00000263666 HBG2P69892 147 aa13.96□□□□□ -0.17
PDZRN3-201ENST00000263666 TVP23CQ96ET8 276 aa13.96□□□□□ -0.17
PDZRN3-201ENST00000263666 GAR1Q9NY12 217 aaKnown RBP13.96□□□□□ -0.17
PDZRN3-201ENST00000263666 IGKV1-27A0A075B6S5 117 aa13.96□□□□□ -0.17
PDZRN3-201ENST00000263666 AP4M1O00189 453 aa13.96□□□□□ -0.17
PDZRN3-201ENST00000263666 KLK10O43240 276 aa13.96□□□□□ -0.17
PDZRN3-201ENST00000263666 FOXG1P55316 489 aaPredicted RBP13.96□□□□□ -0.17
PDZRN3-201ENST00000263666 FAM3AP98173 230 aa13.96□□□□□ -0.17
PDZRN3-201ENST00000263666 ZNF818PQ6ZRF7 136 aa13.96□□□□□ -0.17
PDZRN3-201ENST00000263666 DMBX1Q8NFW5 382 aa13.96□□□□□ -0.17
PDZRN3-201ENST00000263666 IGSF23A1L1A6 192 aa13.96□□□□□ -0.18
PDZRN3-201ENST00000263666 IFNA10P01566 189 aa13.96□□□□□ -0.18
PDZRN3-201ENST00000263666 HLA-GP17693 338 aa13.96□□□□□ -0.18
PDZRN3-201ENST00000263666 BATFQ16520 125 aa13.96□□□□□ -0.18
PDZRN3-201ENST00000263666 DNM1P46Q6ZS02 220 aa13.96□□□□□ -0.18
PDZRN3-201ENST00000263666 CARHSP1Q9Y2V2 147 aaKnown RBP13.96□□□□□ -0.18
PDZRN3-201ENST00000263666 ACAA1P09110 424 aaPredicted RBP13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 SEC11BP0C7V7 166 aa13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 SRD5A2P31213 254 aa13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 FAM209BQ5JX69 171 aa13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 GFOD1Q9NXC2 390 aa13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 CEACAM6P40199 344 aa13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 CD200P41217 278 aa13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 CEBPDP49716 269 aaPredicted RBP13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 EDDM3BP56851 147 aa13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 RAB4BP61018 213 aa13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 RND3P61587 244 aa13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 MRPL41Q8IXM3 137 aaKnown RBP13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 ZNF610Q8N9Z0 462 aa13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 C1orf147Q96MC9 270 aaPredicted RBP13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 USF3Q68DE3 2245 aa13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 CDIPTO14735 213 aa13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 LYZL6O75951 148 aa13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 DFFBO76075 338 aa13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 MST1LQ2TV78 715 aa13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 WNT5BQ9H1J7 359 aa13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 GCM1Q9NP62 436 aa13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 PNRC2Q9NPJ4 139 aaKnown RBP13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 IGHV1-45A0A0A0MS14 117 aa13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 TGIF2-C20orf24A0A0A6YYL0 155 aa13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 ZNF705FA8MVS1 300 aaPredicted RBP13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 ZNF705DP0CH99 300 aaPredicted RBP13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 ZNF705BP0CI00 300 aaPredicted RBP13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 ERVS71-1P61550 626 aa13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 WDR25Q64LD2 544 aaPredicted RBP13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 C1orf87Q8N0U7 546 aa13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 SMIM8Q96KF7 97 aa13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 LIME1Q9H400 295 aa13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 POMT1Q9Y6A1 747 aa13.95□□□□□ -0.18
PDZRN3-201ENST00000263666 CACNA1BQ00975 2339 aa13.94□□□□□ -0.18
PDZRN3-201ENST00000263666 A0A1W2PPV4 95 aa13.94□□□□□ -0.18
PDZRN3-201ENST00000263666 TRGC2P03986 189 aa13.94□□□□□ -0.18
PDZRN3-201ENST00000263666 SSPNQ14714 243 aa13.94□□□□□ -0.18
PDZRN3-201ENST00000263666 FAM58AQ8N1B3 248 aa13.94□□□□□ -0.18
PDZRN3-201ENST00000263666 TRDCB7Z8K6 153 aa13.94□□□□□ -0.18
PDZRN3-201ENST00000263666 TIMM8BQ9Y5J9 83 aaPredicted RBP13.94□□□□□ -0.18
PDZRN3-201ENST00000263666 ABCA4P78363 2273 aa13.94□□□□□ -0.18
PDZRN3-201ENST00000263666 PTGDSP41222 190 aa13.94□□□□□ -0.18
PDZRN3-201ENST00000263666 HGFACQ04756 655 aa13.94□□□□□ -0.18
PDZRN3-201ENST00000263666 HABP2Q14520 560 aaPredicted RBP13.94□□□□□ -0.18
PDZRN3-201ENST00000263666 OR1C1Q15619 314 aa13.94□□□□□ -0.18
PDZRN3-201ENST00000263666 DBX1A6NMT0 343 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms