RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 SLC22A24Q8N4F4 322 aa16.27■□□□□ 0.2
COL4A3BP-201ENST00000261415 ADAD2Q8NCV1 583 aaKnown RBP16.27■□□□□ 0.2
COL4A3BP-201ENST00000261415 RNF133Q8WVZ7 376 aa16.27■□□□□ 0.2
COL4A3BP-201ENST00000261415 RAB39BQ96DA2 213 aa16.27■□□□□ 0.2
COL4A3BP-201ENST00000261415 OR51B6Q9H340 312 aa16.27■□□□□ 0.2
COL4A3BP-201ENST00000261415 TGIF2-C20orf24A0A0A6YYL0 155 aa16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 ZNF727A8MUV8 499 aa16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 ARF1P84077 181 aaKnown RBP16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 NRN1LQ496H8 165 aa16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 ZNF343Q6P1L6 599 aa16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 KLHL24Q6TFL4 600 aa16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 ABHD12BQ7Z5M8 362 aaPredicted RBP16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 OR10S1Q8NGN2 331 aa16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 MRGPRFQ96AM1 343 aa16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 SLAMF6Q96DU3 332 aa16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 ELOVL3Q9HB03 270 aa16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 FRRS1LQ9P0K9 344 aa16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 LRP12Q9Y561 859 aa16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 A0A1W2PPQ1 181 aa16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 H3BQ15 152 aa16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 K7EPK0 472 aa16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 RER1O15258 196 aa16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 RPP14O95059 124 aaKnown RBP16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 AMBPP02760 352 aa16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 GLIPR1P48060 266 aa16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 FAM71E2Q8N5Q1 922 aa16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 SLC35G3Q8N808 338 aa16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 FAM210BQ96KR6 192 aa16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 PCNX1Q96RV3 2341 aa16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 KALRNO60229 2985 aa16.26■□□□□ 0.19
COL4A3BP-201ENST00000261415 CST2P09228 141 aa16.25■□□□□ 0.19
COL4A3BP-201ENST00000261415 TBPP20226 339 aa16.25■□□□□ 0.19
COL4A3BP-201ENST00000261415 RAB32Q13637 225 aa16.25■□□□□ 0.19
COL4A3BP-201ENST00000261415 IQCJQ1A5X6 159 aa16.25■□□□□ 0.19
COL4A3BP-201ENST00000261415 ZNF774Q6NX45 483 aa16.25■□□□□ 0.19
COL4A3BP-201ENST00000261415 CENPMQ9NSP4 180 aa16.25■□□□□ 0.19
COL4A3BP-201ENST00000261415 CACNA1BQ00975 2339 aa16.25■□□□□ 0.19
COL4A3BP-201ENST00000261415 IGSF10Q6WRI0 2623 aa16.25■□□□□ 0.19
COL4A3BP-201ENST00000261415 TMEM212A6NML5 194 aa16.25■□□□□ 0.19
COL4A3BP-201ENST00000261415 HSPB2A8KAH6 182 aa16.25■□□□□ 0.19
COL4A3BP-201ENST00000261415 GLI4P10075 376 aa16.25■□□□□ 0.19
COL4A3BP-201ENST00000261415 RPL12P30050 165 aaKnown RBP16.25■□□□□ 0.19
COL4A3BP-201ENST00000261415 HERPUD1Q15011 391 aa16.25■□□□□ 0.19
COL4A3BP-201ENST00000261415 HSPB2Q16082 182 aa16.25■□□□□ 0.19
COL4A3BP-201ENST00000261415 FAM166AQ6J272 317 aa16.25■□□□□ 0.19
COL4A3BP-201ENST00000261415 C1orf87Q8N0U7 546 aa16.25■□□□□ 0.19
COL4A3BP-201ENST00000261415 PNRC2Q9NPJ4 139 aaKnown RBP16.25■□□□□ 0.19
COL4A3BP-201ENST00000261415 URGCP-MRPS24S4R325 110 aa16.25■□□□□ 0.19
COL4A3BP-201ENST00000261415 POLEQ07864 2286 aa16.24■□□□□ 0.19
COL4A3BP-201ENST00000261415 ZNF878C9JN71 531 aa16.24■□□□□ 0.19
COL4A3BP-201ENST00000261415 IFNA6P05013 189 aa16.24■□□□□ 0.19
COL4A3BP-201ENST00000261415 LMO1P25800 156 aa16.24■□□□□ 0.19
COL4A3BP-201ENST00000261415 CEACAM8P31997 349 aaPredicted RBP16.24■□□□□ 0.19
COL4A3BP-201ENST00000261415 PMPCAQ10713 525 aa16.24■□□□□ 0.19
COL4A3BP-201ENST00000261415 DEGS2Q6QHC5 323 aa16.24■□□□□ 0.19
COL4A3BP-201ENST00000261415 ZNF676Q8N7Q3 588 aa16.24■□□□□ 0.19
COL4A3BP-201ENST00000261415 GJC3Q8NFK1 279 aa16.24■□□□□ 0.19
COL4A3BP-201ENST00000261415 OR10A7Q8NGE5 316 aa16.24■□□□□ 0.19
COL4A3BP-201ENST00000261415 STARD4Q96DR4 205 aa16.24■□□□□ 0.19
COL4A3BP-201ENST00000261415 ARV1Q9H2C2 271 aa16.24■□□□□ 0.19
COL4A3BP-201ENST00000261415 PLSCR4Q9NRQ2 329 aa16.24■□□□□ 0.19
COL4A3BP-201ENST00000261415 CBLN4Q9NTU7 201 aa16.24■□□□□ 0.19
COL4A3BP-201ENST00000261415 SH3BGRL2Q9UJC5 107 aa16.24■□□□□ 0.19
COL4A3BP-201ENST00000261415 B4DEV8 164 aa16.24■□□□□ 0.19
COL4A3BP-201ENST00000261415 RBX1P62877 108 aa16.24■□□□□ 0.19
COL4A3BP-201ENST00000261415 HIST1H3AP68431 136 aa16.24■□□□□ 0.19
COL4A3BP-201ENST00000261415 SLC16A14Q7RTX9 510 aa16.24■□□□□ 0.19
COL4A3BP-201ENST00000261415 OR4S1Q8NGB4 309 aa16.24■□□□□ 0.19
COL4A3BP-201ENST00000261415 GTF2A1LQ9UNN4 478 aa16.24■□□□□ 0.19
COL4A3BP-201ENST00000261415 MYO7BQ6PIF6 2116 aa16.23■□□□□ 0.19
COL4A3BP-201ENST00000261415 CNOT4O95628 575 aaKnown RBP16.23■□□□□ 0.19
COL4A3BP-201ENST00000261415 H2BFMP0C1H6 154 aa16.23■□□□□ 0.19
COL4A3BP-201ENST00000261415 OR5H8P0DN80 308 aa16.23■□□□□ 0.19
COL4A3BP-201ENST00000261415 TMEM11P17152 192 aa16.23■□□□□ 0.19
COL4A3BP-201ENST00000261415 PAX5Q02548 391 aa16.23■□□□□ 0.19
COL4A3BP-201ENST00000261415 Q6ZT83 130 aa16.23■□□□□ 0.19
COL4A3BP-201ENST00000261415 POC1AQ8NBT0 407 aa16.23■□□□□ 0.19
COL4A3BP-201ENST00000261415 ST6GALNAC3Q8NDV1 305 aa16.23■□□□□ 0.19
COL4A3BP-201ENST00000261415 OR51F2Q8NH61 342 aa16.23■□□□□ 0.19
COL4A3BP-201ENST00000261415 FBXL17Q9UF56 701 aa16.23■□□□□ 0.19
COL4A3BP-201ENST00000261415 VAX2Q9UIW0 290 aa16.23■□□□□ 0.19
COL4A3BP-201ENST00000261415 PROCRQ9UNN8 238 aa16.23■□□□□ 0.19
COL4A3BP-201ENST00000261415 A0A096LPE4 126 aa16.22■□□□□ 0.19
COL4A3BP-201ENST00000261415 A0A1W2PPZ6 126 aa16.22■□□□□ 0.19
COL4A3BP-201ENST00000261415 SFT2D2O95562 160 aa16.22■□□□□ 0.19
COL4A3BP-201ENST00000261415 CGAP01215 116 aa16.22■□□□□ 0.19
COL4A3BP-201ENST00000261415 IL15RAQ13261 267 aa16.22■□□□□ 0.19
COL4A3BP-201ENST00000261415 C1orf194Q5T5A4 169 aa16.22■□□□□ 0.19
COL4A3BP-201ENST00000261415 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.22■□□□□ 0.19
COL4A3BP-201ENST00000261415 CPEB3Q8NE35 698 aaKnown RBP16.22■□□□□ 0.19
COL4A3BP-201ENST00000261415 TVP23CQ96ET8 276 aa16.22■□□□□ 0.19
COL4A3BP-201ENST00000261415 SNX22Q96L94 193 aa16.22■□□□□ 0.19
COL4A3BP-201ENST00000261415 METTL8Q9H825 291 aaKnown RBP16.22■□□□□ 0.19
COL4A3BP-201ENST00000261415 BORCS7-ASMTA0A0B4J1R7 106 aa16.22■□□□□ 0.19
COL4A3BP-201ENST00000261415 OR4C45A6NMZ5 311 aa16.22■□□□□ 0.19
COL4A3BP-201ENST00000261415 PATE4P0C8F1 98 aa16.22■□□□□ 0.19
COL4A3BP-201ENST00000261415 ZNF32P17041 273 aa16.22■□□□□ 0.19
COL4A3BP-201ENST00000261415 IGHV1-2P23083 117 aa16.22■□□□□ 0.19
COL4A3BP-201ENST00000261415 FCGR2CP31995 323 aa16.22■□□□□ 0.19
COL4A3BP-201ENST00000261415 CDKN1BP46527 198 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms