RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 SOCS1O15524 211 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 PEX11BO96011 259 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 PDCD1Q15116 288 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 ZNF766Q5HY98 468 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 RPS19BP1Q86WX3 136 aaKnown RBP11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 C10orf126Q8N4M7 172 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 OR1N2Q8NGR9 330 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 OR1F12Q8NHA8 337 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 UFC1Q9Y3C8 167 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 AUP1Q9Y679 476 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 SMIM13P0DJ93 91 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 ZNF137PP52743 207 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 TNFRSF9Q07011 255 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 DPTQ07507 201 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 OR1L1Q8NH94 360 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 PTX4Q96A99 478 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 PERPQ96FX8 193 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 ZNF665Q9H7R5 613 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 FRRS1LQ9P0K9 344 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 TRGV10A0A0A0MS01 117 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 KIR2DS2P43631 304 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 TWIST1Q15672 202 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 CA13Q8N1Q1 262 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 TMEM252Q8N6L7 170 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 SFRP2Q96HF1 295 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 TMEM38BQ9NVV0 291 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 OR2W1Q9Y3N9 320 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 NUP214P35658 2090 aaPredicted RBP11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 BRWD3Q6RI45 1802 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 TRBV9A0A0B4J1U6 114 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 NDUFB4O95168 129 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 C1QAP02745 245 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 RBP4P02753 201 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 CD74P04233 296 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 ADIPOQQ15848 244 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 AGBL5Q8NDL9 886 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 DEFB108BQ8NET1 73 aa11.59□□□□□ -0.55
PCDHGA3-201ENST00000253812 TRBV5-3A0A0A0MS03 114 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 A0A1W2PR80 420 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 FRG2CA6NGY1 282 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 NKX2-2O95096 273 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 RUNX1Q01196 453 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 ZNF260Q3ZCT1 412 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 LILRA6Q6PI73 481 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 OR8I2Q8N0Y5 310 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 C6orf106Q9H6K1 298 aaPredicted RBP11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 A0A1B0GWB2 263 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 B4GALT1P15291 398 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 METAP1P53582 386 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 ZNF117Q03924 483 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 VASH2Q86V25 355 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 SSMEM1Q8WWF3 244 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 TUBA4BQ9H853 241 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 PLAC1Q9HBJ0 212 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 LAMTOR2Q9Y2Q5 125 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 CDAP32320 146 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 C21orf58P58505 322 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 RAE1P78406 368 aaKnown RBP11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 MORN4Q8NDC4 146 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 ZCCHC14Q8WYQ9 949 aaKnown RBP11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 C12orf49Q9H741 205 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 PSG11Q9UQ72 335 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 NUDT3O95989 172 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 ORM2P19652 201 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 CCR5P51681 352 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 AMMECR1LQ6DCA0 310 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 OR5R1Q8NH85 324 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 SPACA9Q96E40 222 aaPredicted RBP11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 SIGMAR1Q99720 223 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 RARRES2Q99969 163 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 SEBOXQ9HB31 216 aaPredicted RBP11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 SLC52A3Q9NQ40 469 aa11.58□□□□□ -0.56
PCDHGA3-201ENST00000253812 CYB561P49447 251 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 SLC35B1P78383 322 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 FZD5Q13467 585 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 ATRAIDQ6UW56 229 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 CALHM1Q8IU99 346 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 ZNF502Q8TBZ5 544 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 IP6K3Q96PC2 410 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 TBC1D29Q9UFV1 150 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 TRAV8-7A0A075B6U6 113 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 A1L4Q6 167 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 C19orf67A6NJJ6 358 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 IL4P05112 153 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 H2BFSP57053 126 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 FMODQ06828 376 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 VAX1Q5SQQ9 334 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 GAPTQ8N292 157 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 MUC15Q8N387 334 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 BAHD1Q8TBE0 780 aaPredicted RBP11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 PHF7Q9BWX1 381 aaPredicted RBP11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 SRIP30626 198 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 CLDN18P56856 261 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 ZNF683Q8IZ20 524 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 R3HDM4Q96D70 268 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 GABRG3Q99928 467 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 MMP17Q9ULZ9 603 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 HS3ST3A1Q9Y663 406 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 TAF1LQ8IZX4 1826 aa11.57□□□□□ -0.56
PCDHGA3-201ENST00000253812 H3BMH7 237 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms