RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 HSD17B6O14756 317 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 ATP5HO75947 161 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 IGKV1D-33P01593 117 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 IGKV1-33P01594 117 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 IGHV3-7P01780 117 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 CCDC159P0C7I6 412 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 LIMS3P0CW19 117 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 LIMS4P0CW20 117 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 C21orf33P30042 268 aaPredicted RBP8.11□□□□□ -1.11
VPS50-201ENST00000251739 MYCNOSP40205 109 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 ZIK1Q3SY52 487 aaPredicted RBP8.11□□□□□ -1.11
VPS50-201ENST00000251739 SLC35E3Q7Z769 313 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 STPG2Q8N412 459 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 LINC00311Q8N616 119 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 COMMD1Q8N668 190 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 RNF152Q8N8N0 203 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 C8orf31Q8N9H6 132 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 TMEM104Q8NE00 496 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 OR5AK2Q8NH90 309 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 RFESDQ8TAC1 157 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 MRGPRDQ8TDS7 321 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 TNFAIP8L1Q8WVP5 186 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 ST6GALNAC6Q969X2 333 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 CPNE2Q96FN4 548 aaPredicted RBP8.11□□□□□ -1.11
VPS50-201ENST00000251739 MRPL48Q96GC5 212 aaKnown RBP8.11□□□□□ -1.11
VPS50-201ENST00000251739 MCRIP2Q9BUT9 160 aaKnown RBP8.11□□□□□ -1.11
VPS50-201ENST00000251739 JAM3Q9BX67 310 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 BARHL1Q9BZE3 327 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 MRPS18AQ9NVS2 196 aaKnown RBP8.11□□□□□ -1.11
VPS50-201ENST00000251739 DHDHQ9UQ10 334 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 U3KQE9 123 aa8.11□□□□□ -1.11
VPS50-201ENST00000251739 TRAV39A0A0B4J263 110 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 IGHV1-3A0A0C4DH29 117 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 SCO2A0A1W2PP80 73 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 LINC01548A6NM66 108 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 SNTNA6NMZ2 147 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 SERPINE3A8MV23 424 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 C15orf65H3BRN8 121 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 FADS2O95864 444 aaKnown RBP8.1□□□□□ -1.11
VPS50-201ENST00000251739 RAB3AP20336 220 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 GPR12P47775 334 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 GNG10P50151 68 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 RBM11P57052 281 aaKnown RBP8.1□□□□□ -1.11
VPS50-201ENST00000251739 CFHR3Q02985 330 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 RAB40BQ12829 278 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 KLHL22Q53GT1 634 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 XAF1Q6GPH4 301 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 TGIF2LXQ8IUE1 241 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 ZNF695Q8IW36 515 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 CBR4Q8N4T8 237 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 SUMF2Q8NBJ7 301 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 KLHL30-AS1Q8NEE0 82 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 OR52M1Q8NGK5 317 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 OR52I1Q8NGK6 324 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 OR10K1Q8NGX5 313 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 TSEN15Q8WW01 171 aaKnown RBP8.1□□□□□ -1.11
VPS50-201ENST00000251739 DPF1Q92782 380 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 RAX2Q96IS3 184 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 NR1H4Q96RI1 486 aaPredicted RBP8.1□□□□□ -1.11
VPS50-201ENST00000251739 DPCDQ9BVM2 203 aaPredicted RBP8.1□□□□□ -1.11
VPS50-201ENST00000251739 AMBNQ9NP70 447 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 PLSCR3Q9NRY6 295 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 LIN7CQ9NUP9 197 aaKnown RBP8.1□□□□□ -1.11
VPS50-201ENST00000251739 TAS2R4Q9NYW5 299 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 LINC00527Q9UJ94 153 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 ORC6Q9Y5N6 252 aa8.1□□□□□ -1.11
VPS50-201ENST00000251739 A0A1W2PPE3 182 aa8.09□□□□□ -1.11
VPS50-201ENST00000251739 CIB2O75838 187 aa8.09□□□□□ -1.11
VPS50-201ENST00000251739 ZNF137PP52743 207 aa8.09□□□□□ -1.11
VPS50-201ENST00000251739 SLC35B1P78383 322 aa8.09□□□□□ -1.11
VPS50-201ENST00000251739 CD69Q07108 199 aa8.09□□□□□ -1.11
VPS50-201ENST00000251739 DCTN2Q13561 401 aaKnown RBP8.09□□□□□ -1.11
VPS50-201ENST00000251739 HES1Q14469 280 aa8.09□□□□□ -1.11
VPS50-201ENST00000251739 HNF4GQ14541 408 aa8.09□□□□□ -1.11
VPS50-201ENST00000251739 RSU1Q15404 277 aa8.09□□□□□ -1.11
VPS50-201ENST00000251739 Q3ZCU0 254 aa8.09□□□□□ -1.11
VPS50-201ENST00000251739 DEFB121Q5J5C9 76 aa8.09□□□□□ -1.11
VPS50-201ENST00000251739 LINC00596Q86U02 117 aa8.09□□□□□ -1.11
VPS50-201ENST00000251739 FOXRED2Q8IWF2 684 aa8.09□□□□□ -1.11
VPS50-201ENST00000251739 Q8N3U1 123 aa8.09□□□□□ -1.11
VPS50-201ENST00000251739 Q8N9W7 124 aa8.09□□□□□ -1.11
VPS50-201ENST00000251739 OR10X1Q8NGY0 326 aa8.09□□□□□ -1.11
VPS50-201ENST00000251739 APH1BQ8WW43 257 aa8.09□□□□□ -1.11
VPS50-201ENST00000251739 WWC2-AS2Q96NR7 200 aa8.09□□□□□ -1.11
VPS50-201ENST00000251739 ABCG5Q9H222 651 aa8.09□□□□□ -1.11
VPS50-201ENST00000251739 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.09□□□□□ -1.11
VPS50-201ENST00000251739 ZNF580Q9UK33 172 aa8.09□□□□□ -1.11
VPS50-201ENST00000251739 ST3GAL6Q9Y274 331 aa8.09□□□□□ -1.11
VPS50-201ENST00000251739 GMPPBQ9Y5P6 360 aa8.09□□□□□ -1.11
VPS50-201ENST00000251739 TMEM30CPA0ZSE6 113 aa8.08□□□□□ -1.12
VPS50-201ENST00000251739 NUDT19A8MXV4 375 aa8.08□□□□□ -1.12
VPS50-201ENST00000251739 AP4M1O00189 453 aa8.08□□□□□ -1.12
VPS50-201ENST00000251739 CCRL2O00421 344 aa8.08□□□□□ -1.12
VPS50-201ENST00000251739 GEMIN2O14893 280 aaKnown RBP8.08□□□□□ -1.12
VPS50-201ENST00000251739 MPZL2O60487 215 aa8.08□□□□□ -1.12
VPS50-201ENST00000251739 OR7C1O76099 320 aaPredicted RBP8.08□□□□□ -1.12
VPS50-201ENST00000251739 CDRT1O95170 752 aa8.08□□□□□ -1.12
VPS50-201ENST00000251739 GAPDHP04406 335 aaKnown RBP8.08□□□□□ -1.12
VPS50-201ENST00000251739 VHLP40337 213 aa8.08□□□□□ -1.12
VPS50-201ENST00000251739 REG1BP48304 166 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms