RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 IFT22Q9H7X7 185 aa16.71■□□□□ 0.27
NEDD8-201ENST00000250495 TMEM138Q9NPI0 162 aa16.71■□□□□ 0.27
NEDD8-201ENST00000250495 PAK1IP1Q9NWT1 392 aaPredicted RBP16.71■□□□□ 0.27
NEDD8-201ENST00000250495 IL36GQ9NZH8 169 aa16.71■□□□□ 0.27
NEDD8-201ENST00000250495 DNAH3Q8TD57 4116 aa16.71■□□□□ 0.26
NEDD8-201ENST00000250495 A0A1W2PPI3 338 aa16.7■□□□□ 0.26
NEDD8-201ENST00000250495 FGF16O43320 207 aa16.7■□□□□ 0.26
NEDD8-201ENST00000250495 CDRT1O95170 752 aa16.7■□□□□ 0.26
NEDD8-201ENST00000250495 ZNF93P35789 620 aaPredicted RBP16.7■□□□□ 0.26
NEDD8-201ENST00000250495 GNG10P50151 68 aa16.7■□□□□ 0.26
NEDD8-201ENST00000250495 ADARB1P78563 741 aaKnown RBP16.7■□□□□ 0.26
NEDD8-201ENST00000250495 NHLRC3Q5JS37 347 aa16.7■□□□□ 0.26
NEDD8-201ENST00000250495 OR52N1Q8NH53 320 aa16.7■□□□□ 0.26
NEDD8-201ENST00000250495 ZNF780AO75290 641 aaPredicted RBP16.69■□□□□ 0.26
NEDD8-201ENST00000250495 OR7C1O76099 320 aaPredicted RBP16.69■□□□□ 0.26
NEDD8-201ENST00000250495 SMIM18P0DKX4 95 aa16.69■□□□□ 0.26
NEDD8-201ENST00000250495 SSTR5P35346 364 aa16.69■□□□□ 0.26
NEDD8-201ENST00000250495 DIAPH2-AS1Q14236 149 aa16.69■□□□□ 0.26
NEDD8-201ENST00000250495 HNF4GQ14541 408 aa16.69■□□□□ 0.26
NEDD8-201ENST00000250495 KCTD21Q4G0X4 260 aa16.69■□□□□ 0.26
NEDD8-201ENST00000250495 DDI2Q5TDH0 399 aa16.69■□□□□ 0.26
NEDD8-201ENST00000250495 LINC00596Q86U02 117 aa16.69■□□□□ 0.26
NEDD8-201ENST00000250495 ZNF329Q86UD4 541 aa16.69■□□□□ 0.26
NEDD8-201ENST00000250495 C5orf56Q8N8D9 126 aa16.69■□□□□ 0.26
NEDD8-201ENST00000250495 OR51D1Q8NGF3 324 aa16.69■□□□□ 0.26
NEDD8-201ENST00000250495 YTHDF1Q9BYJ9 559 aaKnown RBP16.69■□□□□ 0.26
NEDD8-201ENST00000250495 GPR61Q9BZJ8 451 aa16.69■□□□□ 0.26
NEDD8-201ENST00000250495 TRAV39A0A0B4J263 110 aa16.68■□□□□ 0.26
NEDD8-201ENST00000250495 TMEM30CPA0ZSE6 113 aa16.68■□□□□ 0.26
NEDD8-201ENST00000250495 IRGMA1A4Y4 181 aa16.68■□□□□ 0.26
NEDD8-201ENST00000250495 SERPINE3A8MV23 424 aa16.68■□□□□ 0.26
NEDD8-201ENST00000250495 IGKV1D-33P01593 117 aa16.68■□□□□ 0.26
NEDD8-201ENST00000250495 IGKV1-33P01594 117 aa16.68■□□□□ 0.26
NEDD8-201ENST00000250495 GAPDHP04406 335 aaKnown RBP16.68■□□□□ 0.26
NEDD8-201ENST00000250495 BDKRB2P30411 391 aa16.68■□□□□ 0.26
NEDD8-201ENST00000250495 ETV1P50549 477 aa16.68■□□□□ 0.26
NEDD8-201ENST00000250495 RBM11P57052 281 aaKnown RBP16.68■□□□□ 0.26
NEDD8-201ENST00000250495 TTC23Q5W5X9 447 aa16.68■□□□□ 0.26
NEDD8-201ENST00000250495 XAF1Q6GPH4 301 aa16.68■□□□□ 0.26
NEDD8-201ENST00000250495 OR52M1Q8NGK5 317 aa16.68■□□□□ 0.26
NEDD8-201ENST00000250495 ZFP57Q9NU63 452 aa16.68■□□□□ 0.26
NEDD8-201ENST00000250495 BABAM2Q9NXR7 383 aa16.68■□□□□ 0.26
NEDD8-201ENST00000250495 NDUFA13Q9P0J0 144 aa16.68■□□□□ 0.26
NEDD8-201ENST00000250495 GEMIN2O14893 280 aaKnown RBP16.67■□□□□ 0.26
NEDD8-201ENST00000250495 OGG1O15527 345 aa16.67■□□□□ 0.26
NEDD8-201ENST00000250495 WBP4O75554 376 aaKnown RBP16.67■□□□□ 0.26
NEDD8-201ENST00000250495 SLC6A1P30531 599 aa16.67■□□□□ 0.26
NEDD8-201ENST00000250495 SLC35B1P78383 322 aa16.67■□□□□ 0.26
NEDD8-201ENST00000250495 ZNF816Q0VGE8 651 aaPredicted RBP16.67■□□□□ 0.26
NEDD8-201ENST00000250495 SMN1Q16637 294 aaKnown RBP16.67■□□□□ 0.26
NEDD8-201ENST00000250495 MPV17LQ2QL34 196 aa16.67■□□□□ 0.26
NEDD8-201ENST00000250495 LINC00482Q8N8I6 264 aa16.67■□□□□ 0.26
NEDD8-201ENST00000250495 CYGBQ8WWM9 190 aa16.67■□□□□ 0.26
NEDD8-201ENST00000250495 ARL11Q969Q4 196 aa16.67■□□□□ 0.26
NEDD8-201ENST00000250495 A0A1W2PPE3 182 aa16.66■□□□□ 0.26
NEDD8-201ENST00000250495 K7EIL1 84 aa16.66■□□□□ 0.26
NEDD8-201ENST00000250495 CCRL2O00421 344 aa16.66■□□□□ 0.26
NEDD8-201ENST00000250495 HSD17B6O14756 317 aa16.66■□□□□ 0.26
NEDD8-201ENST00000250495 IGHG2P01859 326 aa16.66■□□□□ 0.26
NEDD8-201ENST00000250495 MYL12AP19105 171 aa16.66■□□□□ 0.26
NEDD8-201ENST00000250495 SERPINA2P20848 420 aa16.66■□□□□ 0.26
NEDD8-201ENST00000250495 RPL23AP62750 156 aaKnown RBP16.66■□□□□ 0.26
NEDD8-201ENST00000250495 EBI3Q14213 229 aa16.66■□□□□ 0.26
NEDD8-201ENST00000250495 GPR176Q14439 515 aa16.66■□□□□ 0.26
NEDD8-201ENST00000250495 ATAD3CQ5T2N8 411 aa16.66■□□□□ 0.26
NEDD8-201ENST00000250495 OR2G6Q5TZ20 316 aa16.66■□□□□ 0.26
NEDD8-201ENST00000250495 SLC35E3Q7Z769 313 aa16.66■□□□□ 0.26
NEDD8-201ENST00000250495 MOB3BQ86TA1 216 aa16.66■□□□□ 0.26
NEDD8-201ENST00000250495 FOXRED2Q8IWF2 684 aa16.66■□□□□ 0.26
NEDD8-201ENST00000250495 COMMD1Q8N668 190 aa16.66■□□□□ 0.26
NEDD8-201ENST00000250495 DPF1Q92782 380 aa16.66■□□□□ 0.26
NEDD8-201ENST00000250495 SMIM19Q96E16 107 aa16.66■□□□□ 0.26
NEDD8-201ENST00000250495 NOL4LQ96MY1 436 aaPredicted RBP16.66■□□□□ 0.26
NEDD8-201ENST00000250495 ZNF581Q9P0T4 197 aa16.66■□□□□ 0.26
NEDD8-201ENST00000250495 IGHV1-3A0A0C4DH29 117 aa16.65■□□□□ 0.26
NEDD8-201ENST00000250495 SMIM31A0A1B0GVY4 71 aa16.65■□□□□ 0.26
NEDD8-201ENST00000250495 ORC5O43913 435 aa16.65■□□□□ 0.26
NEDD8-201ENST00000250495 GTF2F2P13984 249 aa16.65■□□□□ 0.26
NEDD8-201ENST00000250495 RPL5P46777 297 aaKnown RBP16.65■□□□□ 0.26
NEDD8-201ENST00000250495 DEFB121Q5J5C9 76 aa16.65■□□□□ 0.26
NEDD8-201ENST00000250495 MRPL41Q8IXM3 137 aaKnown RBP16.65■□□□□ 0.26
NEDD8-201ENST00000250495 LINC00311Q8N616 119 aa16.65■□□□□ 0.26
NEDD8-201ENST00000250495 C8orf31Q8N9H6 132 aa16.65■□□□□ 0.26
NEDD8-201ENST00000250495 NEK7Q8TDX7 302 aa16.65■□□□□ 0.26
NEDD8-201ENST00000250495 CHCHD3Q9NX63 227 aaKnown RBP16.65■□□□□ 0.26
NEDD8-201ENST00000250495 CKLFQ9UBR5 152 aa16.65■□□□□ 0.26
NEDD8-201ENST00000250495 EXOSC1Q9Y3B2 195 aaKnown RBP16.65■□□□□ 0.26
NEDD8-201ENST00000250495 SIRT4Q9Y6E7 314 aaPredicted RBP16.65■□□□□ 0.26
NEDD8-201ENST00000250495 TRIM64CA6NLI5 447 aa16.64■□□□□ 0.25
NEDD8-201ENST00000250495 C15orf65H3BRN8 121 aa16.64■□□□□ 0.25
NEDD8-201ENST00000250495 SDCBPO00560 298 aaPredicted RBP16.64■□□□□ 0.25
NEDD8-201ENST00000250495 GPX5O75715 221 aa16.64■□□□□ 0.25
NEDD8-201ENST00000250495 IL3RAP26951 378 aa16.64■□□□□ 0.25
NEDD8-201ENST00000250495 THBS3P49746 956 aa16.64■□□□□ 0.25
NEDD8-201ENST00000250495 KRTAP10-11P60412 298 aa16.64■□□□□ 0.25
NEDD8-201ENST00000250495 SLC22A6Q4U2R8 563 aa16.64■□□□□ 0.25
NEDD8-201ENST00000250495 OR2W3Q7Z3T1 314 aa16.64■□□□□ 0.25
NEDD8-201ENST00000250495 STX19Q8N4C7 294 aa16.64■□□□□ 0.25
NEDD8-201ENST00000250495 OR2T10Q8NGZ9 312 aa16.64■□□□□ 0.25
NEDD8-201ENST00000250495 CCDC107Q8WV48 283 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms