RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 ZNF266Q14584 549 aa14.58□□□□□ -0.08
FOXA1-201ENST00000250448 HIKESHIQ53FT3 197 aa14.58□□□□□ -0.08
FOXA1-201ENST00000250448 NAXEQ8NCW5 288 aa14.58□□□□□ -0.08
FOXA1-201ENST00000250448 RFNGQ9Y644 331 aa14.58□□□□□ -0.08
FOXA1-201ENST00000250448 IGKV1-12A0A0C4DH73 117 aa14.57□□□□□ -0.08
FOXA1-201ENST00000250448 IGSF23A1L1A6 192 aa14.57□□□□□ -0.08
FOXA1-201ENST00000250448 RBFOX3A6NFN3 312 aa14.57□□□□□ -0.08
FOXA1-201ENST00000250448 KLRC4-KLRK1H3BQV0 150 aa14.57□□□□□ -0.08
FOXA1-201ENST00000250448 PITX3O75364 302 aa14.57□□□□□ -0.08
FOXA1-201ENST00000250448 IGKV1D-12P01611 117 aa14.57□□□□□ -0.08
FOXA1-201ENST00000250448 FBP1P09467 338 aa14.57□□□□□ -0.08
FOXA1-201ENST00000250448 COX5BP10606 129 aa14.57□□□□□ -0.08
FOXA1-201ENST00000250448 CCL20P78556 96 aa14.57□□□□□ -0.08
FOXA1-201ENST00000250448 KIAA0141Q14154 515 aaPredicted RBP14.57□□□□□ -0.08
FOXA1-201ENST00000250448 RAB35Q15286 201 aa14.57□□□□□ -0.08
FOXA1-201ENST00000250448 FBXL14Q8N1E6 418 aa14.57□□□□□ -0.08
FOXA1-201ENST00000250448 OSR2Q8N2R0 312 aa14.57□□□□□ -0.08
FOXA1-201ENST00000250448 OR8G5Q8NG78 346 aa14.57□□□□□ -0.08
FOXA1-201ENST00000250448 SLAMF9Q96A28 289 aa14.57□□□□□ -0.08
FOXA1-201ENST00000250448 FOXD3Q9UJU5 478 aaPredicted RBP14.57□□□□□ -0.08
FOXA1-201ENST00000250448 NKX2-6A6NCS4 301 aa14.57□□□□□ -0.08
FOXA1-201ENST00000250448 RPS10P46783 165 aaKnown RBP14.57□□□□□ -0.08
FOXA1-201ENST00000250448 LHX2P50458 406 aa14.57□□□□□ -0.08
FOXA1-201ENST00000250448 TNFSF10P50591 281 aa14.57□□□□□ -0.08
FOXA1-201ENST00000250448 CLEC2AQ6UVW9 174 aa14.57□□□□□ -0.08
FOXA1-201ENST00000250448 ABHD14AQ9BUJ0 271 aa14.57□□□□□ -0.08
FOXA1-201ENST00000250448 VAMP5O95183 116 aa14.56□□□□□ -0.08
FOXA1-201ENST00000250448 CDS2O95674 445 aa14.56□□□□□ -0.08
FOXA1-201ENST00000250448 RAB2AP61019 212 aa14.56□□□□□ -0.08
FOXA1-201ENST00000250448 MRPS34P82930 218 aaKnown RBP14.56□□□□□ -0.08
FOXA1-201ENST00000250448 FAM27BQ5VT28 67 aa14.56□□□□□ -0.08
FOXA1-201ENST00000250448 SPSB3Q6PJ21 355 aa14.56□□□□□ -0.08
FOXA1-201ENST00000250448 ZFP62Q8NB50 900 aaPredicted RBP14.56□□□□□ -0.08
FOXA1-201ENST00000250448 TOLLIPQ9H0E2 274 aa14.56□□□□□ -0.08
FOXA1-201ENST00000250448 UNKLQ9H9P5 680 aaKnown RBP14.56□□□□□ -0.08
FOXA1-201ENST00000250448 TRDCB7Z8K6 153 aa14.56□□□□□ -0.08
FOXA1-201ENST00000250448 IGHV3-9P01782 118 aa14.56□□□□□ -0.08
FOXA1-201ENST00000250448 HTR5AP47898 357 aa14.56□□□□□ -0.08
FOXA1-201ENST00000250448 SRPXP78539 464 aa14.56□□□□□ -0.08
FOXA1-201ENST00000250448 MMP24Q9Y5R2 645 aa14.56□□□□□ -0.08
FOXA1-201ENST00000250448 DOCK7Q96N67 2140 aa14.56□□□□□ -0.08
FOXA1-201ENST00000250448 IGF2RP11717 2491 aa14.56□□□□□ -0.08
FOXA1-201ENST00000250448 C3orf85A0A1B0GTC6 90 aa14.56□□□□□ -0.08
FOXA1-201ENST00000250448 H3BQ15 152 aa14.56□□□□□ -0.08
FOXA1-201ENST00000250448 PDCD6O75340 191 aa14.56□□□□□ -0.08
FOXA1-201ENST00000250448 HOXA5P20719 270 aa14.56□□□□□ -0.08
FOXA1-201ENST00000250448 CLDN18P56856 261 aa14.56□□□□□ -0.08
FOXA1-201ENST00000250448 SOX8P57073 446 aa14.56□□□□□ -0.08
FOXA1-201ENST00000250448 Q6ZPA2 131 aa14.56□□□□□ -0.08
FOXA1-201ENST00000250448 RAB39BQ96DA2 213 aa14.56□□□□□ -0.08
FOXA1-201ENST00000250448 GGACTQ9BVM4 153 aa14.56□□□□□ -0.08
FOXA1-201ENST00000250448 SCNM1Q9BWG6 230 aa14.56□□□□□ -0.08
FOXA1-201ENST00000250448 PAPOLGQ9BWT3 736 aaKnown RBP14.56□□□□□ -0.08
FOXA1-201ENST00000250448 ST3GAL6Q9Y274 331 aa14.56□□□□□ -0.08
FOXA1-201ENST00000250448 MRPS18CQ9Y3D5 142 aaKnown RBP14.56□□□□□ -0.08
FOXA1-201ENST00000250448 DSPP15924 2871 aaKnown RBP14.55□□□□□ -0.08
FOXA1-201ENST00000250448 SHANK1Q9Y566 2161 aa14.55□□□□□ -0.08
FOXA1-201ENST00000250448 BTBD17A6NE02 478 aa14.55□□□□□ -0.08
FOXA1-201ENST00000250448 ZNF716A6NP11 495 aa14.55□□□□□ -0.08
FOXA1-201ENST00000250448 ZNF724A8MTY0 619 aa14.55□□□□□ -0.08
FOXA1-201ENST00000250448 SYNGR3O43761 229 aa14.55□□□□□ -0.08
FOXA1-201ENST00000250448 NKX2-1P43699 371 aaPredicted RBP14.55□□□□□ -0.08
FOXA1-201ENST00000250448 OR8B8Q15620 311 aa14.55□□□□□ -0.08
FOXA1-201ENST00000250448 ZNF774Q6NX45 483 aa14.55□□□□□ -0.08
FOXA1-201ENST00000250448 GTF3AQ92664 365 aaKnown RBP14.55□□□□□ -0.08
FOXA1-201ENST00000250448 KIAA1456Q9P272 454 aa14.55□□□□□ -0.08
FOXA1-201ENST00000250448 ZNF891A8MT65 544 aaPredicted RBP14.55□□□□□ -0.08
FOXA1-201ENST00000250448 MPPED1O15442 326 aa14.55□□□□□ -0.08
FOXA1-201ENST00000250448 YIF1AO95070 293 aa14.55□□□□□ -0.08
FOXA1-201ENST00000250448 NRASP01111 189 aa14.55□□□□□ -0.08
FOXA1-201ENST00000250448 PPYP01298 95 aa14.55□□□□□ -0.08
FOXA1-201ENST00000250448 LCATP04180 440 aa14.55□□□□□ -0.08
FOXA1-201ENST00000250448 SRP19P09132 144 aaKnown RBP14.55□□□□□ -0.08
FOXA1-201ENST00000250448 RND3P61587 244 aa14.55□□□□□ -0.08
FOXA1-201ENST00000250448 MALLQ13021 153 aa14.55□□□□□ -0.08
FOXA1-201ENST00000250448 ALKBH3Q96Q83 286 aaPredicted RBP14.55□□□□□ -0.08
FOXA1-201ENST00000250448 TMEM222Q9H0R3 208 aa14.55□□□□□ -0.08
FOXA1-201ENST00000250448 IL36GQ9NZH8 169 aa14.55□□□□□ -0.08
FOXA1-201ENST00000250448 ZNF727A8MUV8 499 aa14.54□□□□□ -0.08
FOXA1-201ENST00000250448 OMGP23515 440 aa14.54□□□□□ -0.08
FOXA1-201ENST00000250448 COTL1Q14019 142 aa14.54□□□□□ -0.08
FOXA1-201ENST00000250448 SLC10A1Q14973 349 aa14.54□□□□□ -0.08
FOXA1-201ENST00000250448 PDCD1Q15116 288 aa14.54□□□□□ -0.08
FOXA1-201ENST00000250448 TMEM42Q69YG0 159 aa14.54□□□□□ -0.08
FOXA1-201ENST00000250448 OR1F12Q8NHA8 337 aa14.54□□□□□ -0.08
FOXA1-201ENST00000250448 PLEKHF2Q9H8W4 249 aa14.54□□□□□ -0.08
FOXA1-201ENST00000250448 RYDENQ9NUL5 291 aaKnown RBP14.54□□□□□ -0.08
FOXA1-201ENST00000250448 HSD17B6O14756 317 aa14.54□□□□□ -0.08
FOXA1-201ENST00000250448 SSSCA1O60232 199 aa14.54□□□□□ -0.08
FOXA1-201ENST00000250448 TAGLN2P37802 199 aaKnown RBP14.54□□□□□ -0.08
FOXA1-201ENST00000250448 UBE2KP61086 200 aa14.54□□□□□ -0.08
FOXA1-201ENST00000250448 FAM185AQ8N0U4 392 aa14.54□□□□□ -0.08
FOXA1-201ENST00000250448 TMEM171Q8WVE6 324 aa14.54□□□□□ -0.08
FOXA1-201ENST00000250448 SPIN2AQ99865 258 aa14.54□□□□□ -0.08
FOXA1-201ENST00000250448 SPIN2BQ9BPZ2 258 aa14.54□□□□□ -0.08
FOXA1-201ENST00000250448 DMRT1Q9Y5R6 373 aa14.54□□□□□ -0.08
FOXA1-201ENST00000250448 CEBPGP53567 150 aa14.53□□□□□ -0.08
FOXA1-201ENST00000250448 HAGHQ16775 308 aa14.53□□□□□ -0.08
FOXA1-201ENST00000250448 SLC25A31Q9H0C2 315 aa14.53□□□□□ -0.08
FOXA1-201ENST00000250448 ZNF442Q9H7R0 627 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms