RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 RRP8O43159 456 aaKnown RBP14.49□□□□□ -0.09
SGPP1-201ENST00000247225 MMP7P09237 267 aaPredicted RBP14.49□□□□□ -0.09
SGPP1-201ENST00000247225 HNF1AP20823 631 aa14.49□□□□□ -0.09
SGPP1-201ENST00000247225 FUT6P51993 359 aa14.49□□□□□ -0.09
SGPP1-201ENST00000247225 SUCLG1P53597 346 aaKnown RBP14.49□□□□□ -0.09
SGPP1-201ENST00000247225 CLN3Q13286 438 aa14.49□□□□□ -0.09
SGPP1-201ENST00000247225 RAB35Q15286 201 aa14.49□□□□□ -0.09
SGPP1-201ENST00000247225 WDR5BQ86VZ2 330 aa14.49□□□□□ -0.09
SGPP1-201ENST00000247225 EP300Q09472 2414 aaPredicted RBP14.49□□□□□ -0.09
SGPP1-201ENST00000247225 A0A1W2PPQ1 181 aa14.49□□□□□ -0.09
SGPP1-201ENST00000247225 P04436 131 aa14.49□□□□□ -0.09
SGPP1-201ENST00000247225 LIFP15018 202 aa14.49□□□□□ -0.09
SGPP1-201ENST00000247225 DTYMKP23919 212 aa14.49□□□□□ -0.09
SGPP1-201ENST00000247225 C3AR1Q16581 482 aa14.49□□□□□ -0.09
SGPP1-201ENST00000247225 OR10D3Q8NH80 312 aa14.49□□□□□ -0.09
SGPP1-201ENST00000247225 POLEQ07864 2286 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 SMCO3A2RU48 225 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 SLC22A20A6NK97 555 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 CD300LBA8K4G0 201 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 TRAPPC2LH3BP13 241 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 EGR1P18146 543 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 COL19A1Q14993 1142 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 LTC4SQ16873 150 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 HIKESHIQ53FT3 197 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 ZNF808Q8N4W9 903 aaPredicted RBP14.48□□□□□ -0.09
SGPP1-201ENST00000247225 LYPD6BQ8NI32 183 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 OR14J1Q9UGF5 321 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 A0A087X0M5 115 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 UBE2L5PA0A1B0GUS4 154 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 A0A1B0GX30 115 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 SYNGR3O43761 229 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 CLDN15P56746 228 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 CYB5R2Q6BCY4 276 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 CPEB3Q8NE35 698 aaKnown RBP14.48□□□□□ -0.09
SGPP1-201ENST00000247225 PSMF1Q92530 271 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 RBMXL1Q96E39 390 aaKnown RBP14.48□□□□□ -0.09
SGPP1-201ENST00000247225 SLC25A22Q9H936 323 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 TMEM38BQ9NVV0 291 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 CPAMD8Q8IZJ3 1885 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 IFNL4K9M1U5 179 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 SIRPB1O00241 398 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 IGLV3-19P01714 112 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 PRDX4Q13162 271 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.48□□□□□ -0.09
SGPP1-201ENST00000247225 MKXQ8IYA7 352 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 ABHD5Q8WTS1 349 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 PACRGQ96M98 296 aaPredicted RBP14.48□□□□□ -0.09
SGPP1-201ENST00000247225 OR2H1Q9GZK4 316 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 WNT5BQ9H1J7 359 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 KIAA1456Q9P272 454 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 WASF3Q9UPY6 502 aa14.48□□□□□ -0.09
SGPP1-201ENST00000247225 CADP27708 2225 aa14.47□□□□□ -0.09
SGPP1-201ENST00000247225 CLDN1O95832 211 aa14.47□□□□□ -0.09
SGPP1-201ENST00000247225 FIP1L1Q6UN15 594 aaKnown RBP14.47□□□□□ -0.09
SGPP1-201ENST00000247225 GPR146Q96CH1 333 aa14.47□□□□□ -0.09
SGPP1-201ENST00000247225 SDSLQ96GA7 329 aa14.47□□□□□ -0.09
SGPP1-201ENST00000247225 LYRM2Q9NU23 88 aaPredicted RBP14.47□□□□□ -0.09
SGPP1-201ENST00000247225 OR1A1Q9P1Q5 309 aa14.47□□□□□ -0.09
SGPP1-201ENST00000247225 FOXD3Q9UJU5 478 aaPredicted RBP14.47□□□□□ -0.09
SGPP1-201ENST00000247225 CHD3Q12873 2000 aaKnown RBP14.47□□□□□ -0.09
SGPP1-201ENST00000247225 LRP4O75096 1905 aa14.47□□□□□ -0.09
SGPP1-201ENST00000247225 KCNMB1Q16558 191 aa14.47□□□□□ -0.09
SGPP1-201ENST00000247225 WDR74Q6RFH5 385 aaPredicted RBP14.47□□□□□ -0.09
SGPP1-201ENST00000247225 C20orf204Q6ZNR8 217 aa14.47□□□□□ -0.09
SGPP1-201ENST00000247225 FAM166BA8MTA8 275 aa14.46□□□□□ -0.09
SGPP1-201ENST00000247225 C9J4A7 227 aa14.46□□□□□ -0.09
SGPP1-201ENST00000247225 DSCR4P56555 118 aaPredicted RBP14.46□□□□□ -0.09
SGPP1-201ENST00000247225 SPINK14Q6IE38 97 aa14.46□□□□□ -0.09
SGPP1-201ENST00000247225 FAM53AQ6NSI3 398 aaPredicted RBP14.46□□□□□ -0.09
SGPP1-201ENST00000247225 ZDHHC23Q8IYP9 409 aa14.46□□□□□ -0.09
SGPP1-201ENST00000247225 C1orf87Q8N0U7 546 aa14.46□□□□□ -0.09
SGPP1-201ENST00000247225 LHX4Q969G2 390 aa14.46□□□□□ -0.09
SGPP1-201ENST00000247225 SMIM7Q9BQ49 75 aa14.46□□□□□ -0.09
SGPP1-201ENST00000247225 ANGPTL4Q9BY76 406 aa14.46□□□□□ -0.09
SGPP1-201ENST00000247225 ARV1Q9H2C2 271 aa14.46□□□□□ -0.09
SGPP1-201ENST00000247225 C12orf49Q9H741 205 aa14.46□□□□□ -0.09
SGPP1-201ENST00000247225 PSENENQ9NZ42 101 aa14.46□□□□□ -0.09
SGPP1-201ENST00000247225 OR5H1A6NKK0 313 aa14.46□□□□□ -0.09
SGPP1-201ENST00000247225 CYTIPO60759 359 aa14.46□□□□□ -0.09
SGPP1-201ENST00000247225 MRPL33O75394 65 aaKnown RBP14.46□□□□□ -0.09
SGPP1-201ENST00000247225 VAMP5O95183 116 aa14.46□□□□□ -0.09
SGPP1-201ENST00000247225 ARF1P84077 181 aaKnown RBP14.46□□□□□ -0.09
SGPP1-201ENST00000247225 H3F3AP84243 136 aa14.46□□□□□ -0.09
SGPP1-201ENST00000247225 Q6ZRM9 215 aa14.46□□□□□ -0.09
SGPP1-201ENST00000247225 TMEM54Q969K7 222 aa14.46□□□□□ -0.09
SGPP1-201ENST00000247225 KRASP01116 189 aa14.46□□□□□ -0.1
SGPP1-201ENST00000247225 VDAC1P21796 283 aa14.46□□□□□ -0.1
SGPP1-201ENST00000247225 HERPUD1Q15011 391 aa14.46□□□□□ -0.1
SGPP1-201ENST00000247225 OR10J5Q8NHC4 309 aa14.46□□□□□ -0.1
SGPP1-201ENST00000247225 CLDND2Q8NHS1 167 aa14.46□□□□□ -0.1
SGPP1-201ENST00000247225 GATAD1Q8WUU5 269 aa14.46□□□□□ -0.1
SGPP1-201ENST00000247225 GNPNAT1Q96EK6 184 aaPredicted RBP14.46□□□□□ -0.1
SGPP1-201ENST00000247225 SLC39A9Q9NUM3 307 aa14.46□□□□□ -0.1
SGPP1-201ENST00000247225 PISDQ9UG56 409 aa14.46□□□□□ -0.1
SGPP1-201ENST00000247225 NOSIPQ9Y314 301 aaKnown RBP14.46□□□□□ -0.1
SGPP1-201ENST00000247225 DMRT1Q9Y5R6 373 aa14.46□□□□□ -0.1
SGPP1-201ENST00000247225 PITX3O75364 302 aa14.45□□□□□ -0.1
SGPP1-201ENST00000247225 PCOLCEQ15113 449 aa14.45□□□□□ -0.1
SGPP1-201ENST00000247225 TMPRSS7Q7RTY8 843 aa14.45□□□□□ -0.1
SGPP1-201ENST00000247225 ZNF729A6NN14 1252 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms