RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 DLL4Q9NR61 685 aa12.73□□□□□ -0.37
HDHD3-201ENST00000238379 PIPOXQ9P0Z9 390 aa12.73□□□□□ -0.37
HDHD3-201ENST00000238379 C14orf166Q9Y224 244 aaKnown RBP12.73□□□□□ -0.37
HDHD3-201ENST00000238379 ARFGEF3Q5TH69 2177 aa12.72□□□□□ -0.37
HDHD3-201ENST00000238379 TRBV6-7A0A0A0MS04 114 aa12.72□□□□□ -0.37
HDHD3-201ENST00000238379 IRF2P14316 349 aa12.72□□□□□ -0.37
HDHD3-201ENST00000238379 CD34P28906 385 aa12.72□□□□□ -0.37
HDHD3-201ENST00000238379 GABRA2P47869 451 aa12.72□□□□□ -0.37
HDHD3-201ENST00000238379 HMGN3Q15651 99 aa12.72□□□□□ -0.37
HDHD3-201ENST00000238379 MUC15Q8N387 334 aa12.72□□□□□ -0.37
HDHD3-201ENST00000238379 SNX22Q96L94 193 aa12.72□□□□□ -0.37
HDHD3-201ENST00000238379 TAF9BQ9HBM6 251 aa12.72□□□□□ -0.37
HDHD3-201ENST00000238379 MAB21L2Q9Y586 359 aa12.72□□□□□ -0.37
HDHD3-201ENST00000238379 B8ZZF3 427 aa12.72□□□□□ -0.37
HDHD3-201ENST00000238379 GOSR2O14653 212 aa12.72□□□□□ -0.37
HDHD3-201ENST00000238379 SLC22A5O76082 557 aa12.72□□□□□ -0.37
HDHD3-201ENST00000238379 SIX6O95475 246 aa12.72□□□□□ -0.37
HDHD3-201ENST00000238379 SFT2D2O95562 160 aa12.72□□□□□ -0.37
HDHD3-201ENST00000238379 GLIPR1P48060 266 aa12.72□□□□□ -0.37
HDHD3-201ENST00000238379 GZMKP49863 264 aa12.72□□□□□ -0.37
HDHD3-201ENST00000238379 H2BFSP57053 126 aa12.72□□□□□ -0.37
HDHD3-201ENST00000238379 HERV-K104P61576 105 aa12.72□□□□□ -0.37
HDHD3-201ENST00000238379 TEX36Q5VZQ5 186 aa12.72□□□□□ -0.37
HDHD3-201ENST00000238379 STUMQ69YW2 141 aa12.72□□□□□ -0.37
HDHD3-201ENST00000238379 CLEC18BQ6UXF7 455 aa12.72□□□□□ -0.37
HDHD3-201ENST00000238379 CASTOR1Q8WTX7 329 aa12.72□□□□□ -0.37
HDHD3-201ENST00000238379 LRRC30A6NM36 301 aa12.71□□□□□ -0.38
HDHD3-201ENST00000238379 NPIPB11E5RHQ5 1161 aa12.71□□□□□ -0.38
HDHD3-201ENST00000238379 K7N7A8 449 aa12.71□□□□□ -0.38
HDHD3-201ENST00000238379 DIRAS3O95661 229 aa12.71□□□□□ -0.38
HDHD3-201ENST00000238379 GIPP09681 153 aaPredicted RBP12.71□□□□□ -0.38
HDHD3-201ENST00000238379 MUC1P15941 1255 aaPredicted RBP12.71□□□□□ -0.38
HDHD3-201ENST00000238379 KRBOX4Q5JUW0 171 aa12.71□□□□□ -0.38
HDHD3-201ENST00000238379 LY6G6FQ5SQ64 297 aa12.71□□□□□ -0.38
HDHD3-201ENST00000238379 DCAF12L2Q5VW00 463 aa12.71□□□□□ -0.38
HDHD3-201ENST00000238379 ZNRF1Q8ND25 227 aa12.71□□□□□ -0.38
HDHD3-201ENST00000238379 OR10J5Q8NHC4 309 aa12.71□□□□□ -0.38
HDHD3-201ENST00000238379 IL1F10Q8WWZ1 152 aa12.71□□□□□ -0.38
HDHD3-201ENST00000238379 WDR89Q96FK6 387 aaPredicted RBP12.71□□□□□ -0.38
HDHD3-201ENST00000238379 SDSLQ96GA7 329 aa12.71□□□□□ -0.38
HDHD3-201ENST00000238379 PHB2Q99623 299 aa12.71□□□□□ -0.38
HDHD3-201ENST00000238379 RSRP1Q9BUV0 290 aa12.71□□□□□ -0.38
HDHD3-201ENST00000238379 CHIAQ9BZP6 476 aa12.71□□□□□ -0.38
HDHD3-201ENST00000238379 DSCAMO60469 2012 aa12.7□□□□□ -0.38
HDHD3-201ENST00000238379 FAM172BPA6NC97 362 aa12.7□□□□□ -0.38
HDHD3-201ENST00000238379 OOEPA6NGQ2 149 aa12.7□□□□□ -0.38
HDHD3-201ENST00000238379 MGST3O14880 152 aa12.7□□□□□ -0.38
HDHD3-201ENST00000238379 PRB1P04280 392 aa12.7□□□□□ -0.38
HDHD3-201ENST00000238379 HLA-GP17693 338 aa12.7□□□□□ -0.38
HDHD3-201ENST00000238379 SLC9A3R2Q15599 337 aa12.7□□□□□ -0.38
HDHD3-201ENST00000238379 LIN54Q6MZP7 749 aa12.7□□□□□ -0.38
HDHD3-201ENST00000238379 H1FOOQ8IZA3 346 aaPredicted RBP12.7□□□□□ -0.38
HDHD3-201ENST00000238379 SLC38A6Q8IZM9 456 aa12.7□□□□□ -0.38
HDHD3-201ENST00000238379 TPRX1Q8N7U7 411 aa12.7□□□□□ -0.38
HDHD3-201ENST00000238379 DEFB108BQ8NET1 73 aa12.7□□□□□ -0.38
HDHD3-201ENST00000238379 PPP1R35Q8TAP8 253 aa12.7□□□□□ -0.38
HDHD3-201ENST00000238379 CLEC4MQ9H2X3 399 aaPredicted RBP12.7□□□□□ -0.38
HDHD3-201ENST00000238379 OR1A1Q9P1Q5 309 aa12.7□□□□□ -0.38
HDHD3-201ENST00000238379 CRYM-AS1A6NIL9 109 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 DBX1A6NMT0 343 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 C12orf77C9JDV5 145 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 G3V3Q6 166 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 TMEM178BH3BS89 294 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 C19orf84I3L1E1 186 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 GNRHRP30968 328 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 PIGPP57054 158 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 RAP2BP61225 183 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 KCNJ8Q15842 424 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 PRR18Q8N4B5 295 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 ZNF561Q8N587 486 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 OR2T35Q8NGX2 323 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 UBALD1Q8TB05 177 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 SLC2A9Q9NRM0 540 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 KCNIP1Q9NZI2 227 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 OR2W1Q9Y3N9 320 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 KIAA2026Q5HYC2 2103 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 A0A0B4J2A0 478 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 IGKV1D-13A0A0B4J2D9 117 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 HEXAP06865 529 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 IGKV1-13P0DP09 117 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 ERP29P30040 261 aaKnown RBP12.69□□□□□ -0.38
HDHD3-201ENST00000238379 SNRPD2P62316 118 aaKnown RBP12.69□□□□□ -0.38
HDHD3-201ENST00000238379 ANKRD55Q3KP44 614 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 Q5BKY6 102 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 LPCAT3Q6P1A2 487 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 C11orf88Q6PI97 169 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 ZNF788Q6ZQV5 615 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 SGPP2Q8IWX5 399 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 C1orf87Q8N0U7 546 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 OR13A1Q8NGR1 328 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 MRGPRDQ8TDS7 321 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 CCL17Q92583 94 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 ZNF486Q96H40 463 aaPredicted RBP12.69□□□□□ -0.38
HDHD3-201ENST00000238379 LURAP1Q96LR2 239 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 GAFA1Q96PS6 74 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 TMEM106BQ9NUM4 274 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 SHPKQ9UHJ6 478 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 OPN4Q9UHM6 478 aa12.69□□□□□ -0.38
HDHD3-201ENST00000238379 LGALS8O00214 317 aa12.68□□□□□ -0.38
HDHD3-201ENST00000238379 GYPAP02724 150 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms