RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 SSSCA1O60232 199 aa18.7■□□□□ 0.58
SMARCD2-201ENST00000225742 ARG2P78540 354 aa18.7■□□□□ 0.58
SMARCD2-201ENST00000225742 C5orf24Q7Z6I8 188 aa18.7■□□□□ 0.58
SMARCD2-201ENST00000225742 GNPNAT1Q96EK6 184 aaPredicted RBP18.7■□□□□ 0.58
SMARCD2-201ENST00000225742 KLF2Q9Y5W3 355 aaPredicted RBP18.7■□□□□ 0.58
SMARCD2-201ENST00000225742 BTBD17A6NE02 478 aa18.7■□□□□ 0.58
SMARCD2-201ENST00000225742 NFYBP25208 207 aa18.7■□□□□ 0.58
SMARCD2-201ENST00000225742 PPT1P50897 306 aa18.7■□□□□ 0.58
SMARCD2-201ENST00000225742 TGFBR3Q03167 851 aa18.7■□□□□ 0.58
SMARCD2-201ENST00000225742 CXorf66Q5JRM2 361 aaPredicted RBP18.7■□□□□ 0.58
SMARCD2-201ENST00000225742 AVPI1Q5T686 147 aa18.7■□□□□ 0.58
SMARCD2-201ENST00000225742 C20orf204Q6ZNR8 217 aa18.7■□□□□ 0.58
SMARCD2-201ENST00000225742 C15orf54Q8N8G6 183 aa18.7■□□□□ 0.58
SMARCD2-201ENST00000225742 SUMF1Q8NBK3 374 aa18.7■□□□□ 0.58
SMARCD2-201ENST00000225742 PARP12Q9H0J9 701 aaKnown RBP18.7■□□□□ 0.58
SMARCD2-201ENST00000225742 ZDBF2Q9HCK1 2354 aa18.69■□□□□ 0.58
SMARCD2-201ENST00000225742 WRBO00258 174 aa18.69■□□□□ 0.58
SMARCD2-201ENST00000225742 ZNF14P17017 642 aaPredicted RBP18.69■□□□□ 0.58
SMARCD2-201ENST00000225742 CD82P27701 267 aa18.69■□□□□ 0.58
SMARCD2-201ENST00000225742 TGIF1Q15583 401 aa18.69■□□□□ 0.58
SMARCD2-201ENST00000225742 GABRA6Q16445 453 aa18.69■□□□□ 0.58
SMARCD2-201ENST00000225742 OR10V1Q8NGI7 309 aa18.69■□□□□ 0.58
SMARCD2-201ENST00000225742 CDH20Q9HBT6 801 aa18.69■□□□□ 0.58
SMARCD2-201ENST00000225742 TMEM9BQ9NQ34 198 aa18.69■□□□□ 0.58
SMARCD2-201ENST00000225742 SPEGQ15772 3267 aa18.69■□□□□ 0.58
SMARCD2-201ENST00000225742 PROB1E7EW31 1015 aa18.68■□□□□ 0.58
SMARCD2-201ENST00000225742 FOLR2P14207 255 aa18.68■□□□□ 0.58
SMARCD2-201ENST00000225742 ZNF44P15621 663 aa18.68■□□□□ 0.58
SMARCD2-201ENST00000225742 SELEP16581 610 aa18.68■□□□□ 0.58
SMARCD2-201ENST00000225742 ERVK11-1P61568 191 aa18.68■□□□□ 0.58
SMARCD2-201ENST00000225742 TMEM182Q6ZP80 229 aaPredicted RBP18.68■□□□□ 0.58
SMARCD2-201ENST00000225742 OR2G3Q8NGZ4 309 aa18.68■□□□□ 0.58
SMARCD2-201ENST00000225742 LSM10Q969L4 123 aaKnown RBP18.68■□□□□ 0.58
SMARCD2-201ENST00000225742 EIF5A2Q9GZV4 153 aaKnown RBP18.68■□□□□ 0.58
SMARCD2-201ENST00000225742 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 ZNF806P0C7X5 589 aa18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 CEACAM1P13688 526 aa18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 HOXB1P14653 301 aaPredicted RBP18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 ATP6V0CP27449 155 aa18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 PPP1CBP62140 327 aa18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 P4HA3Q7Z4N8 544 aa18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 FAM213BQ8TBF2 198 aa18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 ARGFXA6NJG6 315 aa18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 SMPD2O60906 423 aa18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 RHBDL1O75783 438 aa18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 SERPINE2P07093 398 aa18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 ACAA1P09110 424 aaPredicted RBP18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 RAC2P15153 192 aa18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 UBE2NP61088 152 aaKnown RBP18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 CLINT1Q14677 625 aa18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 RNFT1Q5M7Z0 435 aa18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 DPPA3Q6W0C5 159 aa18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 ZNF497Q6ZNH5 498 aa18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 C17orf78Q8N4C9 275 aa18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 MAGT1Q9H0U3 335 aa18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 SLC35B3Q9H1N7 401 aa18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 TUBA4BQ9H853 241 aa18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 BIN3Q9NQY0 253 aa18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 ERRFI1Q9UJM3 462 aaPredicted RBP18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 RNF115Q9Y4L5 304 aa18.67■□□□□ 0.58
SMARCD2-201ENST00000225742 COLCA2A8K830 154 aa18.66■□□□□ 0.58
SMARCD2-201ENST00000225742 CHST1O43916 411 aa18.66■□□□□ 0.58
SMARCD2-201ENST00000225742 FHITP49789 147 aa18.66■□□□□ 0.58
SMARCD2-201ENST00000225742 RAB13P51153 203 aa18.66■□□□□ 0.58
SMARCD2-201ENST00000225742 OR5C1Q8NGR4 320 aa18.66■□□□□ 0.58
SMARCD2-201ENST00000225742 RAB40CQ96S21 281 aa18.66■□□□□ 0.58
SMARCD2-201ENST00000225742 EGLN1Q9GZT9 426 aa18.66■□□□□ 0.58
SMARCD2-201ENST00000225742 OR51B6Q9H340 312 aa18.66■□□□□ 0.58
SMARCD2-201ENST00000225742 TAAR3PQ9P1P4 343 aa18.66■□□□□ 0.58
SMARCD2-201ENST00000225742 ZNF407Q9C0G0 2248 aa18.66■□□□□ 0.58
SMARCD2-201ENST00000225742 MYO15AQ9UKN7 3530 aa18.66■□□□□ 0.58
SMARCD2-201ENST00000225742 MED13Q9UHV7 2174 aa18.65■□□□□ 0.58
SMARCD2-201ENST00000225742 TMEM210A6NLX4 147 aa18.65■□□□□ 0.58
SMARCD2-201ENST00000225742 DFFBO76075 338 aa18.65■□□□□ 0.58
SMARCD2-201ENST00000225742 CD200P41217 278 aa18.65■□□□□ 0.58
SMARCD2-201ENST00000225742 DYNLT3P51808 116 aa18.65■□□□□ 0.58
SMARCD2-201ENST00000225742 RPL23AP62750 156 aaKnown RBP18.65■□□□□ 0.58
SMARCD2-201ENST00000225742 INO80CQ6PI98 192 aaPredicted RBP18.65■□□□□ 0.58
SMARCD2-201ENST00000225742 SCCPDHQ8NBX0 429 aa18.65■□□□□ 0.58
SMARCD2-201ENST00000225742 RXFP4Q8TDU9 374 aa18.65■□□□□ 0.58
SMARCD2-201ENST00000225742 GPR146Q96CH1 333 aa18.65■□□□□ 0.58
SMARCD2-201ENST00000225742 HIPK2Q9H2X6 1198 aa18.65■□□□□ 0.58
SMARCD2-201ENST00000225742 SAV1Q9H4B6 383 aaPredicted RBP18.65■□□□□ 0.58
SMARCD2-201ENST00000225742 ARID1AO14497 2285 aa18.65■□□□□ 0.58
SMARCD2-201ENST00000225742 SLC33A1O00400 549 aaPredicted RBP18.65■□□□□ 0.58
SMARCD2-201ENST00000225742 C1QL1O75973 258 aa18.65■□□□□ 0.58
SMARCD2-201ENST00000225742 PGA5P0DJD9 388 aa18.65■□□□□ 0.58
SMARCD2-201ENST00000225742 ZNF146Q15072 292 aa18.65■□□□□ 0.58
SMARCD2-201ENST00000225742 TMEM171Q8WVE6 324 aa18.65■□□□□ 0.58
SMARCD2-201ENST00000225742 ATP5SQ99766 215 aa18.65■□□□□ 0.58
SMARCD2-201ENST00000225742 WIPI2Q9Y4P8 454 aa18.65■□□□□ 0.58
SMARCD2-201ENST00000225742 DNAJC13O75165 2243 aa18.64■□□□□ 0.57
SMARCD2-201ENST00000225742 MEX3AA1L020 520 aaKnown RBP18.64■□□□□ 0.57
SMARCD2-201ENST00000225742 IQCF6A8MYZ5 107 aa18.64■□□□□ 0.57
SMARCD2-201ENST00000225742 SH2D1BO14796 132 aa18.64■□□□□ 0.57
SMARCD2-201ENST00000225742 TNFSF12O43508 249 aa18.64■□□□□ 0.57
SMARCD2-201ENST00000225742 CNOT4O95628 575 aaKnown RBP18.64■□□□□ 0.57
SMARCD2-201ENST00000225742 IGHG3P01860 377 aa18.64■□□□□ 0.57
SMARCD2-201ENST00000225742 CRYBA1P05813 215 aa18.64■□□□□ 0.57
SMARCD2-201ENST00000225742 HOXA1P49639 335 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms