RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 ZNF616Q08AN1 781 aa21.28■■□□□ 1
RUNDC3A-201ENST00000225441 IGSF11Q5DX21 431 aa21.28■■□□□ 1
RUNDC3A-201ENST00000225441 LYRM2Q9NU23 88 aaPredicted RBP21.28■■□□□ 1
RUNDC3A-201ENST00000225441 NKX2-6A6NCS4 301 aa21.27■■□□□ 1
RUNDC3A-201ENST00000225441 K7N7A8 449 aa21.27■■□□□ 1
RUNDC3A-201ENST00000225441 VDAC1P21796 283 aa21.27■■□□□ 1
RUNDC3A-201ENST00000225441 SRYQ05066 204 aa21.27■■□□□ 1
RUNDC3A-201ENST00000225441 MEX3BQ6ZN04 569 aaKnown RBP21.27■■□□□ 1
RUNDC3A-201ENST00000225441 CMTM1Q8IZ96 169 aa21.27■■□□□ 1
RUNDC3A-201ENST00000225441 MPC1Q9Y5U8 109 aa21.27■■□□□ 1
RUNDC3A-201ENST00000225441 ZNF205O95201 554 aa21.27■□□□□ 0.99
RUNDC3A-201ENST00000225441 IGHG3P01860 377 aa21.27■□□□□ 0.99
RUNDC3A-201ENST00000225441 MT-ND4LP03901 98 aa21.27■□□□□ 0.99
RUNDC3A-201ENST00000225441 HAAOP46952 286 aa21.27■□□□□ 0.99
RUNDC3A-201ENST00000225441 PPT1P50897 306 aa21.27■□□□□ 0.99
RUNDC3A-201ENST00000225441 NHLH2Q02577 135 aa21.27■□□□□ 0.99
RUNDC3A-201ENST00000225441 RHEBQ15382 184 aa21.27■□□□□ 0.99
RUNDC3A-201ENST00000225441 UNQ6494/PRO21346Q6UXR6 183 aa21.27■□□□□ 0.99
RUNDC3A-201ENST00000225441 OR5D13Q8NGL4 314 aa21.27■□□□□ 0.99
RUNDC3A-201ENST00000225441 SLAMF9Q96A28 289 aa21.27■□□□□ 0.99
RUNDC3A-201ENST00000225441 USB1Q9BQ65 265 aaKnown RBP21.27■□□□□ 0.99
RUNDC3A-201ENST00000225441 SLC35B3Q9H1N7 401 aa21.27■□□□□ 0.99
RUNDC3A-201ENST00000225441 HIPK2Q9H2X6 1198 aa21.27■□□□□ 0.99
RUNDC3A-201ENST00000225441 SPRR3Q9UBC9 169 aa21.27■□□□□ 0.99
RUNDC3A-201ENST00000225441 LRP5LA4QPB2 252 aa21.26■□□□□ 0.99
RUNDC3A-201ENST00000225441 OR5B21A6NL26 309 aa21.26■□□□□ 0.99
RUNDC3A-201ENST00000225441 SLC25A6P12236 298 aa21.26■□□□□ 0.99
RUNDC3A-201ENST00000225441 RAB1AP62820 205 aa21.26■□□□□ 0.99
RUNDC3A-201ENST00000225441 PLP2Q04941 152 aa21.26■□□□□ 0.99
RUNDC3A-201ENST00000225441 RNPS1Q15287 305 aaKnown RBP21.26■□□□□ 0.99
RUNDC3A-201ENST00000225441 GNPNAT1Q96EK6 184 aaPredicted RBP21.26■□□□□ 0.99
RUNDC3A-201ENST00000225441 TAAR6Q96RI8 345 aa21.26■□□□□ 0.99
RUNDC3A-201ENST00000225441 IFT22Q9H7X7 185 aa21.26■□□□□ 0.99
RUNDC3A-201ENST00000225441 RTTNQ86VV8 2226 aa21.26■□□□□ 0.99
RUNDC3A-201ENST00000225441 H0Y980 276 aa21.25■□□□□ 0.99
RUNDC3A-201ENST00000225441 VAMP2P63027 116 aa21.25■□□□□ 0.99
RUNDC3A-201ENST00000225441 ID3Q02535 119 aa21.25■□□□□ 0.99
RUNDC3A-201ENST00000225441 OR8G1Q15617 311 aa21.25■□□□□ 0.99
RUNDC3A-201ENST00000225441 NAXEQ8NCW5 288 aa21.25■□□□□ 0.99
RUNDC3A-201ENST00000225441 EIF5A2Q9GZV4 153 aaKnown RBP21.25■□□□□ 0.99
RUNDC3A-201ENST00000225441 UNKLQ9H9P5 680 aaKnown RBP21.25■□□□□ 0.99
RUNDC3A-201ENST00000225441 TP53TG5Q9Y2B4 290 aa21.25■□□□□ 0.99
RUNDC3A-201ENST00000225441 DMXL2Q8TDJ6 3036 aa21.25■□□□□ 0.99
RUNDC3A-201ENST00000225441 C5orf49A4QMS7 147 aa21.25■□□□□ 0.99
RUNDC3A-201ENST00000225441 SLC22A20A6NK97 555 aa21.25■□□□□ 0.99
RUNDC3A-201ENST00000225441 ZNF732B4DXR9 585 aa21.25■□□□□ 0.99
RUNDC3A-201ENST00000225441 PDCD1Q15116 288 aa21.25■□□□□ 0.99
RUNDC3A-201ENST00000225441 NMSQ5H8A3 153 aa21.25■□□□□ 0.99
RUNDC3A-201ENST00000225441 ZNF573Q86YE8 665 aa21.25■□□□□ 0.99
RUNDC3A-201ENST00000225441 APH1AQ96BI3 265 aa21.25■□□□□ 0.99
RUNDC3A-201ENST00000225441 LHX6Q9UPM6 363 aa21.25■□□□□ 0.99
RUNDC3A-201ENST00000225441 ANKRD11Q6UB99 2663 aaPredicted RBP21.24■□□□□ 0.99
RUNDC3A-201ENST00000225441 PTAFRP25105 342 aa21.24■□□□□ 0.99
RUNDC3A-201ENST00000225441 GPM6AP51674 278 aa21.24■□□□□ 0.99
RUNDC3A-201ENST00000225441 SPIN3Q5JUX0 258 aa21.24■□□□□ 0.99
RUNDC3A-201ENST00000225441 DPPA3Q6W0C5 159 aa21.24■□□□□ 0.99
RUNDC3A-201ENST00000225441 POM121L2Q96KW2 1035 aa21.24■□□□□ 0.99
RUNDC3A-201ENST00000225441 PKIBQ9C010 78 aa21.24■□□□□ 0.99
RUNDC3A-201ENST00000225441 FGF23Q9GZV9 251 aaPredicted RBP21.24■□□□□ 0.99
RUNDC3A-201ENST00000225441 MTCH1Q9NZJ7 389 aa21.24■□□□□ 0.99
RUNDC3A-201ENST00000225441 ZNF98A6NK75 572 aa21.23■□□□□ 0.99
RUNDC3A-201ENST00000225441 C1orf196B1AJZ1 125 aa21.23■□□□□ 0.99
RUNDC3A-201ENST00000225441 SHEQ5VZ18 495 aa21.23■□□□□ 0.99
RUNDC3A-201ENST00000225441 ZNF880Q6PDB4 577 aa21.23■□□□□ 0.99
RUNDC3A-201ENST00000225441 TUSC5Q8IXB3 177 aa21.23■□□□□ 0.99
RUNDC3A-201ENST00000225441 TMEM252Q8N6L7 170 aa21.23■□□□□ 0.99
RUNDC3A-201ENST00000225441 OR1J1Q8NGS3 322 aa21.23■□□□□ 0.99
RUNDC3A-201ENST00000225441 ZCCHC14Q8WYQ9 949 aaKnown RBP21.23■□□□□ 0.99
RUNDC3A-201ENST00000225441 OR5P3Q8WZ94 311 aa21.23■□□□□ 0.99
RUNDC3A-201ENST00000225441 KCNJ16Q9NPI9 418 aa21.23■□□□□ 0.99
RUNDC3A-201ENST00000225441 RPS10P5Q9NQ39 176 aa21.23■□□□□ 0.99
RUNDC3A-201ENST00000225441 CACNA1AO00555 2505 aa21.23■□□□□ 0.99
RUNDC3A-201ENST00000225441 IGF2RP11717 2491 aa21.23■□□□□ 0.99
RUNDC3A-201ENST00000225441 C3AR1Q16581 482 aa21.22■□□□□ 0.99
RUNDC3A-201ENST00000225441 CLEC9AQ6UXN8 241 aa21.22■□□□□ 0.99
RUNDC3A-201ENST00000225441 ZNF818PQ6ZRF7 136 aa21.22■□□□□ 0.99
RUNDC3A-201ENST00000225441 GAPTQ8N292 157 aa21.22■□□□□ 0.99
RUNDC3A-201ENST00000225441 ZNF561Q8N587 486 aa21.22■□□□□ 0.99
RUNDC3A-201ENST00000225441 HSD17B11Q8NBQ5 300 aa21.22■□□□□ 0.99
RUNDC3A-201ENST00000225441 WDYHV1Q96HA8 205 aa21.22■□□□□ 0.99
RUNDC3A-201ENST00000225441 C7orf77A4D0Y5 90 aa21.22■□□□□ 0.99
RUNDC3A-201ENST00000225441 FAM24AA6NFZ4 105 aa21.22■□□□□ 0.99
RUNDC3A-201ENST00000225441 ANKRD30BLA7E2S9 258 aa21.22■□□□□ 0.99
RUNDC3A-201ENST00000225441 CD300LBA8K4G0 201 aa21.22■□□□□ 0.99
RUNDC3A-201ENST00000225441 SCTP09683 121 aa21.22■□□□□ 0.99
RUNDC3A-201ENST00000225441 GLI4P10075 376 aa21.22■□□□□ 0.99
RUNDC3A-201ENST00000225441 IL24Q13007 206 aa21.22■□□□□ 0.99
RUNDC3A-201ENST00000225441 C14orf79Q96F83 325 aa21.22■□□□□ 0.99
RUNDC3A-201ENST00000225441 COA4Q9NYJ1 87 aa21.22■□□□□ 0.99
RUNDC3A-201ENST00000225441 NCOR2Q9Y618 2525 aa21.21■□□□□ 0.99
RUNDC3A-201ENST00000225441 IGSF23A1L1A6 192 aa21.21■□□□□ 0.99
RUNDC3A-201ENST00000225441 NPIPB11E5RHQ5 1161 aa21.21■□□□□ 0.99
RUNDC3A-201ENST00000225441 J3QW42 95 aa21.21■□□□□ 0.99
RUNDC3A-201ENST00000225441 IGHV3-9P01782 118 aa21.21■□□□□ 0.99
RUNDC3A-201ENST00000225441 HLA-HP01893 362 aa21.21■□□□□ 0.99
RUNDC3A-201ENST00000225441 AWAT1Q58HT5 328 aa21.21■□□□□ 0.99
RUNDC3A-201ENST00000225441 HIST1H2BAQ96A08 127 aa21.21■□□□□ 0.99
RUNDC3A-201ENST00000225441 SH3BGRL3Q9H299 93 aa21.21■□□□□ 0.99
RUNDC3A-201ENST00000225441 CALHM2Q9HA72 323 aa21.21■□□□□ 0.99
RUNDC3A-201ENST00000225441 MED19A0JLT2 244 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms