RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 AASSQ9UDR5 926 aa12.33□□□□□ -0.44
NME3-201ENST00000219302 RYR2Q92736 4967 aa12.32□□□□□ -0.44
NME3-201ENST00000219302 SORL1Q92673 2214 aa12.32□□□□□ -0.44
NME3-201ENST00000219302 C3orf84H3BNL1 204 aa12.32□□□□□ -0.44
NME3-201ENST00000219302 RPSAP08865 295 aaKnown RBP12.32□□□□□ -0.44
NME3-201ENST00000219302 CD1BP29016 333 aa12.32□□□□□ -0.44
NME3-201ENST00000219302 ECI1P42126 302 aa12.32□□□□□ -0.44
NME3-201ENST00000219302 FHL3Q13643 280 aa12.32□□□□□ -0.44
NME3-201ENST00000219302 LPCAT4Q643R3 524 aa12.32□□□□□ -0.44
NME3-201ENST00000219302 C8orf31Q8N9H6 132 aa12.32□□□□□ -0.44
NME3-201ENST00000219302 OR51A2Q8NGJ7 313 aa12.32□□□□□ -0.44
NME3-201ENST00000219302 OR52M1Q8NGK5 317 aa12.32□□□□□ -0.44
NME3-201ENST00000219302 OR5AK2Q8NH90 309 aa12.32□□□□□ -0.44
NME3-201ENST00000219302 TNFAIP8L1Q8WVP5 186 aa12.32□□□□□ -0.44
NME3-201ENST00000219302 ASCL2Q99929 193 aa12.32□□□□□ -0.44
NME3-201ENST00000219302 ALG8Q9BVK2 526 aa12.32□□□□□ -0.44
NME3-201ENST00000219302 IFT22Q9H7X7 185 aa12.32□□□□□ -0.44
NME3-201ENST00000219302 SAC3D1A6NKF1 404 aa12.31□□□□□ -0.44
NME3-201ENST00000219302 TMEM212A6NML5 194 aa12.31□□□□□ -0.44
NME3-201ENST00000219302 ZNF736B4DX44 427 aaPredicted RBP12.31□□□□□ -0.44
NME3-201ENST00000219302 SEC14L6B5MCN3 397 aa12.31□□□□□ -0.44
NME3-201ENST00000219302 IGHG4P01861 327 aa12.31□□□□□ -0.44
NME3-201ENST00000219302 ALPLP05186 524 aa12.31□□□□□ -0.44
NME3-201ENST00000219302 GABRB1P18505 474 aa12.31□□□□□ -0.44
NME3-201ENST00000219302 RAB3AP20336 220 aa12.31□□□□□ -0.44
NME3-201ENST00000219302 NHLRC3Q5JS37 347 aa12.31□□□□□ -0.44
NME3-201ENST00000219302 SATL1Q86VE3 508 aa12.31□□□□□ -0.44
NME3-201ENST00000219302 RTN4IP1Q8WWV3 396 aaPredicted RBP12.31□□□□□ -0.44
NME3-201ENST00000219302 RBMXL1Q96E39 390 aaKnown RBP12.31□□□□□ -0.44
NME3-201ENST00000219302 S1PR3Q99500 378 aa12.31□□□□□ -0.44
NME3-201ENST00000219302 HSPB9Q9BQS6 159 aa12.31□□□□□ -0.44
NME3-201ENST00000219302 FAM118AQ9NWS6 357 aa12.31□□□□□ -0.44
NME3-201ENST00000219302 DHDHQ9UQ10 334 aa12.31□□□□□ -0.44
NME3-201ENST00000219302 TENM2Q9NT68 2774 aa12.3□□□□□ -0.44
NME3-201ENST00000219302 HTR3BO95264 441 aa12.3□□□□□ -0.44
NME3-201ENST00000219302 MOSP00540 346 aa12.3□□□□□ -0.44
NME3-201ENST00000219302 PSMB8P28062 276 aa12.3□□□□□ -0.44
NME3-201ENST00000219302 CHATP28329 748 aa12.3□□□□□ -0.44
NME3-201ENST00000219302 VHLP40337 213 aa12.3□□□□□ -0.44
NME3-201ENST00000219302 F2RL1P55085 397 aa12.3□□□□□ -0.44
NME3-201ENST00000219302 RSU1Q15404 277 aa12.3□□□□□ -0.44
NME3-201ENST00000219302 C1orf146Q5VVC0 180 aa12.3□□□□□ -0.44
NME3-201ENST00000219302 FAM71E2Q8N5Q1 922 aa12.3□□□□□ -0.44
NME3-201ENST00000219302 MYOZ3Q8TDC0 251 aa12.3□□□□□ -0.44
NME3-201ENST00000219302 C4orf3Q8WVX3 66 aa12.3□□□□□ -0.44
NME3-201ENST00000219302 ARL11Q969Q4 196 aa12.3□□□□□ -0.44
NME3-201ENST00000219302 MRPL48Q96GC5 212 aaKnown RBP12.3□□□□□ -0.44
NME3-201ENST00000219302 GPER1Q99527 375 aa12.3□□□□□ -0.44
NME3-201ENST00000219302 GFOD1Q9NXC2 390 aa12.3□□□□□ -0.44
NME3-201ENST00000219302 ST3GAL6Q9Y274 331 aa12.3□□□□□ -0.44
NME3-201ENST00000219302 SIRT4Q9Y6E7 314 aaPredicted RBP12.3□□□□□ -0.44
NME3-201ENST00000219302 TMEM30CPA0ZSE6 113 aa12.29□□□□□ -0.44
NME3-201ENST00000219302 SDCBPO00560 298 aaPredicted RBP12.29□□□□□ -0.44
NME3-201ENST00000219302 MAGEB3O15480 346 aa12.29□□□□□ -0.44
NME3-201ENST00000219302 ORC5O43913 435 aa12.29□□□□□ -0.44
NME3-201ENST00000219302 CDRT1O95170 752 aa12.29□□□□□ -0.44
NME3-201ENST00000219302 MT-ND4P03905 459 aa12.29□□□□□ -0.44
NME3-201ENST00000219302 IGF1P05019 195 aa12.29□□□□□ -0.44
NME3-201ENST00000219302 MRPL28Q13084 256 aaKnown RBP12.29□□□□□ -0.44
NME3-201ENST00000219302 KIAA0141Q14154 515 aaPredicted RBP12.29□□□□□ -0.44
NME3-201ENST00000219302 KLHL22Q53GT1 634 aa12.29□□□□□ -0.44
NME3-201ENST00000219302 OR8H1Q8NGG4 311 aa12.29□□□□□ -0.44
NME3-201ENST00000219302 OR52N1Q8NH53 320 aa12.29□□□□□ -0.44
NME3-201ENST00000219302 UBALD1Q8TB05 177 aa12.29□□□□□ -0.44
NME3-201ENST00000219302 TSEN15Q8WW01 171 aaKnown RBP12.29□□□□□ -0.44
NME3-201ENST00000219302 RGP1Q92546 391 aaPredicted RBP12.29□□□□□ -0.44
NME3-201ENST00000219302 CPNE2Q96FN4 548 aaPredicted RBP12.29□□□□□ -0.44
NME3-201ENST00000219302 MYCBPQ99417 103 aaPredicted RBP12.29□□□□□ -0.44
NME3-201ENST00000219302 RASL11BQ9BPW5 248 aa12.29□□□□□ -0.44
NME3-201ENST00000219302 JAM3Q9BX67 310 aa12.29□□□□□ -0.44
NME3-201ENST00000219302 ERVK13-1Q9NX77 482 aa12.29□□□□□ -0.44
NME3-201ENST00000219302 TAS2R4Q9NYW5 299 aa12.29□□□□□ -0.44
NME3-201ENST00000219302 IL36GQ9NZH8 169 aa12.29□□□□□ -0.44
NME3-201ENST00000219302 ZNF580Q9UK33 172 aa12.29□□□□□ -0.44
NME3-201ENST00000219302 DYNC2H1Q8NCM8 4307 aaKnown RBP12.28□□□□□ -0.44
NME3-201ENST00000219302 SNTNA6NMZ2 147 aa12.28□□□□□ -0.44
NME3-201ENST00000219302 GEMIN2O14893 280 aaKnown RBP12.28□□□□□ -0.44
NME3-201ENST00000219302 SLC31A2O15432 143 aa12.28□□□□□ -0.44
NME3-201ENST00000219302 RRP9O43818 475 aaKnown RBP12.28□□□□□ -0.44
NME3-201ENST00000219302 OR7C1O76099 320 aaPredicted RBP12.28□□□□□ -0.44
NME3-201ENST00000219302 SOX2P48431 317 aa12.28□□□□□ -0.44
NME3-201ENST00000219302 GTF2A1P52655 376 aaPredicted RBP12.28□□□□□ -0.44
NME3-201ENST00000219302 ZNF134P52741 427 aa12.28□□□□□ -0.44
NME3-201ENST00000219302 ZNF137PP52743 207 aa12.28□□□□□ -0.44
NME3-201ENST00000219302 RBM11P57052 281 aaKnown RBP12.28□□□□□ -0.44
NME3-201ENST00000219302 ZIK1Q3SY52 487 aaPredicted RBP12.28□□□□□ -0.44
NME3-201ENST00000219302 ZNF260Q3ZCT1 412 aa12.28□□□□□ -0.44
NME3-201ENST00000219302 Q3ZCU0 254 aa12.28□□□□□ -0.44
NME3-201ENST00000219302 ZNF439Q8NDP4 499 aa12.28□□□□□ -0.44
NME3-201ENST00000219302 OR11H1Q8NG94 326 aa12.28□□□□□ -0.44
NME3-201ENST00000219302 CCDC107Q8WV48 283 aa12.28□□□□□ -0.44
NME3-201ENST00000219302 KCTD7Q96MP8 289 aa12.28□□□□□ -0.44
NME3-201ENST00000219302 FAM192AQ9GZU8 254 aa12.28□□□□□ -0.44
NME3-201ENST00000219302 METTL9Q9H1A3 318 aa12.28□□□□□ -0.44
NME3-201ENST00000219302 ING4Q9UNL4 249 aa12.28□□□□□ -0.44
NME3-201ENST00000219302 ZNF256Q9Y2P7 627 aaPredicted RBP12.28□□□□□ -0.44
NME3-201ENST00000219302 SACSQ9NZJ4 4579 aa12.27□□□□□ -0.45
NME3-201ENST00000219302 IGHV3-43A0A0B4J1X8 118 aa12.27□□□□□ -0.45
NME3-201ENST00000219302 FADS2O95864 444 aaKnown RBP12.27□□□□□ -0.45
NME3-201ENST00000219302 IGHV3-43DP0DP04 118 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms