RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 SP7Q8TDD2 431 aaPredicted RBP11.86□□□□□ -0.51
SF3A1-201ENST00000215793 SSMEM1Q8WWF3 244 aa11.86□□□□□ -0.51
SF3A1-201ENST00000215793 ANGPTL4Q9BY76 406 aa11.86□□□□□ -0.51
SF3A1-201ENST00000215793 PARP11Q9NR21 331 aa11.86□□□□□ -0.51
SF3A1-201ENST00000215793 DXOO77932 396 aaKnown RBP11.86□□□□□ -0.51
SF3A1-201ENST00000215793 OR11H7Q8NGC8 314 aa11.86□□□□□ -0.51
SF3A1-201ENST00000215793 OR10A7Q8NGE5 316 aa11.86□□□□□ -0.51
SF3A1-201ENST00000215793 IL22RA2Q969J5 263 aa11.86□□□□□ -0.51
SF3A1-201ENST00000215793 WASHC3Q9Y3C0 194 aa11.86□□□□□ -0.51
SF3A1-201ENST00000215793 ARAP2Q8WZ64 1704 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 CTXND1A0A1B0GTU2 59 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 PRSS1P07477 247 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 TFF2Q03403 129 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 ZNF79Q15937 498 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 LILRB1Q8NHL6 650 aaPredicted RBP11.85□□□□□ -0.51
SF3A1-201ENST00000215793 CDX2Q99626 313 aaPredicted RBP11.85□□□□□ -0.51
SF3A1-201ENST00000215793 AHCTF1Q8WYP5 2266 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 A0A0U1RQV5 110 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 C7orf77A4D0Y5 90 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 MFNGO00587 321 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 LRP11Q86VZ4 500 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 TMEM116Q8NCL8 245 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 NPAS1Q99742 590 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 A0A1W2PRD5 423 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 A0A1W2PRF3 423 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 A0A1W2PRM7 423 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 ARG1P05089 322 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 FAM157CP0CG43 387 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 EIF4EBP2Q13542 120 aaPredicted RBP11.85□□□□□ -0.51
SF3A1-201ENST00000215793 RTP5Q14D33 572 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 PLPPR5Q32ZL2 321 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 TEPPQ6URK8 271 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 EIF4E3Q8N5X7 224 aaKnown RBP11.85□□□□□ -0.51
SF3A1-201ENST00000215793 LINC00052Q96N35 136 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 TMUB1Q9BVT8 246 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 LPAR5Q9H1C0 372 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 BET1LQ9NYM9 111 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 DTX4Q9Y2E6 619 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 DEDDO75618 318 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 TTRP02766 147 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 IGHV4-34P06331 123 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 CD300CQ08708 224 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 FDX2Q6P4F2 183 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 ZNF385AQ96PM9 386 aaKnown RBP11.85□□□□□ -0.51
SF3A1-201ENST00000215793 CLN8Q9UBY8 286 aa11.85□□□□□ -0.51
SF3A1-201ENST00000215793 TRAV20A0A0B4J274 112 aa11.84□□□□□ -0.51
SF3A1-201ENST00000215793 C7orf66A4D0T2 115 aa11.84□□□□□ -0.51
SF3A1-201ENST00000215793 HLA-DRB5Q30154 266 aa11.84□□□□□ -0.51
SF3A1-201ENST00000215793 LGALSLQ3ZCW2 172 aaPredicted RBP11.84□□□□□ -0.51
SF3A1-201ENST00000215793 VWA1Q6PCB0 445 aa11.84□□□□□ -0.51
SF3A1-201ENST00000215793 OR4X1Q8NH49 305 aa11.84□□□□□ -0.51
SF3A1-201ENST00000215793 ZNF519Q8TB69 540 aa11.84□□□□□ -0.51
SF3A1-201ENST00000215793 ZNF501Q96CX3 271 aaPredicted RBP11.84□□□□□ -0.51
SF3A1-201ENST00000215793 UFC1Q9Y3C8 167 aa11.84□□□□□ -0.51
SF3A1-201ENST00000215793 M0R2Z0 102 aa11.84□□□□□ -0.51
SF3A1-201ENST00000215793 AGFG2O95081 481 aa11.84□□□□□ -0.51
SF3A1-201ENST00000215793 ASAH2BP0C7U1 165 aa11.84□□□□□ -0.51
SF3A1-201ENST00000215793 RBM11P57052 281 aaKnown RBP11.84□□□□□ -0.51
SF3A1-201ENST00000215793 CCDC144NLQ6NUI1 221 aa11.84□□□□□ -0.51
SF3A1-201ENST00000215793 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.84□□□□□ -0.51
SF3A1-201ENST00000215793 RCC2Q9P258 522 aaKnown RBP11.84□□□□□ -0.51
SF3A1-201ENST00000215793 NPTNQ9Y639 398 aa11.84□□□□□ -0.51
SF3A1-201ENST00000215793 ABCA3Q99758 1704 aa11.84□□□□□ -0.51
SF3A1-201ENST00000215793 HELTA6NFD8 242 aa11.84□□□□□ -0.51
SF3A1-201ENST00000215793 CXorf1O96002 111 aa11.84□□□□□ -0.51
SF3A1-201ENST00000215793 FSTP19883 344 aa11.84□□□□□ -0.51
SF3A1-201ENST00000215793 TUSC1Q2TAM9 212 aa11.84□□□□□ -0.51
SF3A1-201ENST00000215793 C10orf113Q5VZT2 155 aa11.84□□□□□ -0.51
SF3A1-201ENST00000215793 SMDT1Q9H4I9 107 aa11.84□□□□□ -0.51
SF3A1-201ENST00000215793 MEOX2P50222 304 aa11.84□□□□□ -0.51
SF3A1-201ENST00000215793 DLK1P80370 383 aa11.84□□□□□ -0.51
SF3A1-201ENST00000215793 LEUTXA8MZ59 168 aa11.83□□□□□ -0.51
SF3A1-201ENST00000215793 G0S2P27469 103 aa11.83□□□□□ -0.51
SF3A1-201ENST00000215793 TMEM50BP56557 158 aa11.83□□□□□ -0.51
SF3A1-201ENST00000215793 DPPA3Q6W0C5 159 aa11.83□□□□□ -0.51
SF3A1-201ENST00000215793 MDP1Q86V88 176 aa11.83□□□□□ -0.51
SF3A1-201ENST00000215793 WDR31Q8NA23 367 aa11.83□□□□□ -0.51
SF3A1-201ENST00000215793 CFHR5Q9BXR6 569 aa11.83□□□□□ -0.51
SF3A1-201ENST00000215793 SVILO95425 2214 aa11.83□□□□□ -0.52
SF3A1-201ENST00000215793 A0A1W2PPC1 479 aa11.83□□□□□ -0.52
SF3A1-201ENST00000215793 PAGE4O60829 102 aa11.83□□□□□ -0.52
SF3A1-201ENST00000215793 EFNB2P52799 333 aa11.83□□□□□ -0.52
SF3A1-201ENST00000215793 TCL1AP56279 114 aa11.83□□□□□ -0.52
SF3A1-201ENST00000215793 VAX1Q5SQQ9 334 aa11.83□□□□□ -0.52
SF3A1-201ENST00000215793 DHRS11Q6UWP2 260 aa11.83□□□□□ -0.52
SF3A1-201ENST00000215793 PRSS27Q9BQR3 290 aa11.83□□□□□ -0.52
SF3A1-201ENST00000215793 TRAV34A0A0B4J273 112 aa11.83□□□□□ -0.52
SF3A1-201ENST00000215793 A0A0J9YW62 118 aa11.83□□□□□ -0.52
SF3A1-201ENST00000215793 LINC00862A6NCI5 91 aa11.83□□□□□ -0.52
SF3A1-201ENST00000215793 SEMA7AO75326 666 aa11.83□□□□□ -0.52
SF3A1-201ENST00000215793 PTBP3O95758 552 aaKnown RBP11.83□□□□□ -0.52
SF3A1-201ENST00000215793 G6PCP35575 357 aa11.83□□□□□ -0.52
SF3A1-201ENST00000215793 ADAD2Q8NCV1 583 aaKnown RBP11.83□□□□□ -0.52
SF3A1-201ENST00000215793 RAB33BQ9H082 229 aa11.83□□□□□ -0.52
SF3A1-201ENST00000215793 PPP1R3EQ9H7J1 279 aa11.83□□□□□ -0.52
SF3A1-201ENST00000215793 MSL2Q9HCI7 577 aa11.83□□□□□ -0.52
SF3A1-201ENST00000215793 J3QR06 171 aa11.83□□□□□ -0.52
SF3A1-201ENST00000215793 CSN3P07498 182 aa11.83□□□□□ -0.52
SF3A1-201ENST00000215793 HIST1H1EP10412 219 aaKnown RBP11.83□□□□□ -0.52
SF3A1-201ENST00000215793 SPINK2P20155 84 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms