RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 LDLRAD3Q86YD5 345 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 PHYHIPLQ96FC7 376 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 NEIL1Q96FI4 390 aaPredicted RBP11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 RHOVQ96L33 236 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 CHRDL1Q9BU40 450 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 YTHDF2Q9Y5A9 579 aaKnown RBP11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 HILPDAQ9Y5L2 63 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 ZNF716A6NP11 495 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 ZNF253O75346 499 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 BGLAPP02818 100 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 GP1BAP07359 652 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 FAM87AP0C7U9 286 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 CRISP2P16562 243 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 BSXQ3C1V8 233 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 OVCH2Q7RTZ1 564 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 TUBAL3A6NHL2 446 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 SRD5A2P31213 254 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 RPL24P83731 157 aaKnown RBP11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 KRTCAP3Q53RY4 240 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 FDX2Q6P4F2 183 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 CD300LDQ6UXZ3 194 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 PCGF1Q9BSM1 259 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 GPR35Q9HC97 309 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 AUP1Q9Y679 476 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 C7orf77A4D0Y5 90 aa11.9□□□□□ -0.51
TGFBR3-201ENST00000212355 H3BTX0 84 aa11.9□□□□□ -0.51
TGFBR3-201ENST00000212355 CRYABP02511 175 aaKnown RBP11.9□□□□□ -0.51
TGFBR3-201ENST00000212355 JMJD6Q6NYC1 403 aaPredicted RBP11.9□□□□□ -0.51
TGFBR3-201ENST00000212355 SEBOXQ9HB31 216 aaPredicted RBP11.9□□□□□ -0.51
TGFBR3-201ENST00000212355 ST6GALNAC2Q9UJ37 374 aa11.9□□□□□ -0.51
TGFBR3-201ENST00000212355 COL18A1P39060 1754 aa11.9□□□□□ -0.51
TGFBR3-201ENST00000212355 H7C2G1 150 aa11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 RANP62826 216 aaKnown RBP11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 TMEM255AQ5JRV8 349 aa11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 C8orf82Q6P1X6 216 aaPredicted RBP11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 ZNF826PQ6ZT77 177 aa11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 OPN3Q9H1Y3 402 aaPredicted RBP11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 AP4M1O00189 453 aa11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 RPS4Y1P22090 263 aaKnown RBP11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 NPY1RP25929 384 aa11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 GUCA2BQ16661 112 aa11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 IZUMO4Q1ZYL8 232 aa11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 HLA-DRB5Q30154 266 aa11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 SSX8Q7RTT4 187 aa11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 TMUB1Q9BVT8 246 aa11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 NAT8Q9UHE5 227 aa11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 TMEM116Q8NCL8 245 aa11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 GLULP15104 373 aa11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 WDR25Q64LD2 544 aaPredicted RBP11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 OOEPA6NGQ2 149 aa11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 MFNGO00587 321 aa11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 CDX4O14627 284 aaPredicted RBP11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 MBPP02686 304 aaPredicted RBP11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 OR4A8P0C604 315 aa11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 PRB4P10163 310 aaPredicted RBP11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 CCKARP32238 428 aa11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 CCL8P80075 99 aa11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 SLC25A42Q86VD7 318 aa11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 SLC22A18ASQ8N1D0 253 aa11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 OR2T10Q8NGZ9 312 aa11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 OPN4Q9UHM6 478 aa11.89□□□□□ -0.51
TGFBR3-201ENST00000212355 IGKV1-8A0A0C4DH67 115 aa11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 hADV38S2A0JD32 116 aa11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 CTSDP07339 412 aaPredicted RBP11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 HLA-GP17693 338 aa11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 CDX2Q99626 313 aaPredicted RBP11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 IL36RNQ9UBH0 155 aa11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 HSPB1P04792 205 aaKnown RBP11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 PRRX1P54821 245 aa11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 MRPL37Q9BZE1 423 aaKnown RBP11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 GSX1Q9H4S2 264 aaPredicted RBP11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 SAP30LQ9HAJ7 183 aa11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 LOC101059948A0A1B0GTJ6 334 aa11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 C5orf52A6NGY3 159 aa11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 OR4C45A6NMZ5 311 aa11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 MDH2P40926 338 aaKnown RBP11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 HIST3H3Q16695 136 aa11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 ATP1A1-AS1Q5TC04 95 aa11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 ZNF721Q8TF20 911 aa11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 CBY1Q9Y3M2 126 aa11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 SNURFLB1AK76 121 aa11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 ACP1P24666 158 aa11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 OR2M3Q8NG83 312 aa11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 DLEC1Q9Y238 1755 aa11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 REG1AP05451 166 aa11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 SCTP09683 121 aa11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 RHBDD2Q6NTF9 364 aa11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 OR10G8Q8NGN5 311 aa11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 RARRES2Q99969 163 aa11.88□□□□□ -0.51
TGFBR3-201ENST00000212355 SPCS3P61009 180 aa11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 NAAAQ02083 359 aa11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 GAB4Q2WGN9 574 aa11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 PIK3IP1Q96FE7 263 aa11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 CKAP5Q14008 2032 aa11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 GNG7O60262 68 aa11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 P2RY1P47900 373 aa11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 RAB7AP51149 207 aa11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 NPAS1Q99742 590 aa11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 RABAC1Q9UI14 185 aa11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 RAC3P60763 192 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms