RNA–Protein interactions for RNA: ENST00000013070.10

UBR7-201, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR7, Length 3,694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-201ENST00000013070 SYNGR1O43759 233 aa11.09□□□□□ -0.63
UBR7-201ENST00000013070 CBR3O75828 277 aa11.09□□□□□ -0.63
UBR7-201ENST00000013070 HOXA5P20719 270 aa11.09□□□□□ -0.63
UBR7-201ENST00000013070 VDAC1P21796 283 aa11.09□□□□□ -0.63
UBR7-201ENST00000013070 SUCLG1P53597 346 aaKnown RBP11.09□□□□□ -0.63
UBR7-201ENST00000013070 SRPXP78539 464 aa11.09□□□□□ -0.63
UBR7-201ENST00000013070 PCOLCEQ15113 449 aa11.09□□□□□ -0.63
UBR7-201ENST00000013070 HIKESHIQ53FT3 197 aa11.09□□□□□ -0.63
UBR7-201ENST00000013070 FADS6Q8N9I5 356 aa11.09□□□□□ -0.63
UBR7-201ENST00000013070 FRZBQ92765 325 aa11.09□□□□□ -0.63
UBR7-201ENST00000013070 WNT5BQ9H1J7 359 aa11.09□□□□□ -0.63
UBR7-201ENST00000013070 RPRMQ9NS64 109 aa11.09□□□□□ -0.63
UBR7-201ENST00000013070 OR14J1Q9UGF5 321 aa11.09□□□□□ -0.63
UBR7-201ENST00000013070 COL6A3P12111 3177 aa11.09□□□□□ -0.63
UBR7-201ENST00000013070 PITX3O75364 302 aa11.09□□□□□ -0.63
UBR7-201ENST00000013070 RNF224P0DH78 156 aa11.09□□□□□ -0.63
UBR7-201ENST00000013070 KHDC3LQ587J8 217 aa11.09□□□□□ -0.63
UBR7-201ENST00000013070 SPINK9Q5DT21 86 aa11.09□□□□□ -0.63
UBR7-201ENST00000013070 PRR14LQ5THK1 2151 aa11.09□□□□□ -0.63
UBR7-201ENST00000013070 C1orf87Q8N0U7 546 aa11.09□□□□□ -0.63
UBR7-201ENST00000013070 OR10J5Q8NHC4 309 aa11.09□□□□□ -0.63
UBR7-201ENST00000013070 SSX3Q99909 188 aa11.09□□□□□ -0.63
UBR7-201ENST00000013070 NGFP01138 241 aa11.08□□□□□ -0.63
UBR7-201ENST00000013070 ERVS71-1P61550 626 aa11.08□□□□□ -0.63
UBR7-201ENST00000013070 PMP22Q01453 160 aa11.08□□□□□ -0.63
UBR7-201ENST00000013070 CRIM1Q9NZV1 1036 aa11.08□□□□□ -0.63
UBR7-201ENST00000013070 A0A0G2JRQ6 117 aa11.08□□□□□ -0.64
UBR7-201ENST00000013070 UBE2L5PA0A1B0GUS4 154 aa11.08□□□□□ -0.64
UBR7-201ENST00000013070 A0A1B0GV90 55 aa11.08□□□□□ -0.64
UBR7-201ENST00000013070 SMCO3A2RU48 225 aa11.08□□□□□ -0.64
UBR7-201ENST00000013070 OR6C6A6NF89 314 aa11.08□□□□□ -0.64
UBR7-201ENST00000013070 SOX15O60248 233 aa11.08□□□□□ -0.64
UBR7-201ENST00000013070 CRYGSP22914 178 aa11.08□□□□□ -0.64
UBR7-201ENST00000013070 OTX1P32242 354 aaPredicted RBP11.08□□□□□ -0.64
UBR7-201ENST00000013070 CXCL12P48061 93 aa11.08□□□□□ -0.64
UBR7-201ENST00000013070 FOXG1P55316 489 aaPredicted RBP11.08□□□□□ -0.64
UBR7-201ENST00000013070 RAC3P60763 192 aa11.08□□□□□ -0.64
UBR7-201ENST00000013070 ARF1P84077 181 aaKnown RBP11.08□□□□□ -0.64
UBR7-201ENST00000013070 CPEB3Q8NE35 698 aaKnown RBP11.08□□□□□ -0.64
UBR7-201ENST00000013070 WFIKKN1Q96NZ8 548 aa11.08□□□□□ -0.64
UBR7-201ENST00000013070 ARV1Q9H2C2 271 aa11.08□□□□□ -0.64
UBR7-201ENST00000013070 TPRP12270 2363 aaKnown RBP11.08□□□□□ -0.64
UBR7-201ENST00000013070 A0A0U1RQK1 487 aa11.08□□□□□ -0.64
UBR7-201ENST00000013070 ARGFXA6NJG6 315 aa11.08□□□□□ -0.64
UBR7-201ENST00000013070 GJE1A6NN92 205 aa11.08□□□□□ -0.64
UBR7-201ENST00000013070 SIRPB1O00241 398 aa11.08□□□□□ -0.64
UBR7-201ENST00000013070 CLDN1O95832 211 aa11.08□□□□□ -0.64
UBR7-201ENST00000013070 MLF1P58340 268 aa11.08□□□□□ -0.64
UBR7-201ENST00000013070 ZNF600Q6ZNG1 722 aa11.08□□□□□ -0.64
UBR7-201ENST00000013070 LAMP3Q9UQV4 416 aa11.08□□□□□ -0.64
UBR7-201ENST00000013070 A0A1W2PPQ1 181 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 FAM166BA8MTA8 275 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 CA11O75493 328 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 HBE1P02100 147 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 TMEM211Q6ICI0 200 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 LRP11Q86VZ4 500 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 HLA-CQ95604 372 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 PLPPR2Q96GM1 343 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 SMIM7Q9BQ49 75 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 PSENENQ9NZ42 101 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 FOXD3Q9UJU5 478 aaPredicted RBP11.07□□□□□ -0.64
UBR7-201ENST00000013070 ROS1P08922 2347 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 hCG_38984A0A1B0GV85 526 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 IFITM10A6NMD0 228 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 DEFA4P12838 97 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 CLN3Q13286 438 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 C3AR1Q16581 482 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 SPINK14Q6IE38 97 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 CARFQ8N187 725 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 CCDC54Q8NEL0 328 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 IFI44Q8TCB0 444 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 LHX4Q969G2 390 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 POM121Q96HA1 1249 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 ATP5SQ99766 215 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 SMOC1Q9H4F8 434 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 C12orf49Q9H741 205 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 SLC39A9Q9NUM3 307 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 PPIHO43447 177 aaKnown RBP11.07□□□□□ -0.64
UBR7-201ENST00000013070 IGLV3-1P01715 115 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 PAX6P26367 422 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 PCBD1P61457 104 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 LYSMD4Q5XG99 296 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 ZNF808Q8N4W9 903 aaPredicted RBP11.07□□□□□ -0.64
UBR7-201ENST00000013070 TMEM37Q8WXS4 190 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 GPR146Q96CH1 333 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 C10orf35Q96D05 121 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 PACRGQ96M98 296 aaPredicted RBP11.07□□□□□ -0.64
UBR7-201ENST00000013070 SLC25A22Q9H936 323 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 USF3Q68DE3 2245 aa11.07□□□□□ -0.64
UBR7-201ENST00000013070 RPL36A-HNRNPH2H7BZ11 118 aa11.06□□□□□ -0.64
UBR7-201ENST00000013070 FKBP2P26885 142 aaKnown RBP11.06□□□□□ -0.64
UBR7-201ENST00000013070 FOLR3P41439 243 aa11.06□□□□□ -0.64
UBR7-201ENST00000013070 CLDND2Q8NHS1 167 aa11.06□□□□□ -0.64
UBR7-201ENST00000013070 SNIP1Q8TAD8 396 aaKnown RBP11.06□□□□□ -0.64
UBR7-201ENST00000013070 ZNF552Q9H707 407 aaPredicted RBP11.06□□□□□ -0.64
UBR7-201ENST00000013070 GPR35Q9HC97 309 aa11.06□□□□□ -0.64
UBR7-201ENST00000013070 PLA2G3Q9NZ20 509 aa11.06□□□□□ -0.64
UBR7-201ENST00000013070 OR1A1Q9P1Q5 309 aa11.06□□□□□ -0.64
UBR7-201ENST00000013070 TRAPPC2LQ9UL33 140 aa11.06□□□□□ -0.64
UBR7-201ENST00000013070 IGLV3-32A0A0A0MS00 114 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms