RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Phyhd1Q9DB26 291 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 NgbQ9ER97 151 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Slc22a5Q9Z0E8 557 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Dicer1Q8R418 1916 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Cldn34dA2AGU5 210 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Gm6096D3YTY6 151 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Enpp7D3Z6V6 446 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Vmn1r121K7N6J4 314 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 ErasQ7TN89 227 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Nmes1Q810Q5 83 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Mrps24Q9CQV5 167 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Tagln2Q9WVA4 199 aaKnown RBP9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Itgb4A2A863 1818 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Olfr911-ps1A0A140T8K0 311 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Vmn2r83E9Q0G7 864 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Spsb2O88838 264 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 P01822 137 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 PtgfrP43117 366 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Rac3P60764 192 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Samt2Q497M0 247 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Slc25a26Q5U680 274 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Olfr193Q7TS43 309 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Cstl1Q80Y72 140 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 TifabQ8JZM6 147 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Odf4Q8VI88 290 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Mrpl14Q9D1I6 145 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 1700020A23RikQ9DA59 131 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 FaimQ9WUD8 179 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 CorinQ9Z319 1113 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Olfr122W4VSP0 330 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Zfp236S4R299 1847 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Kiaa0100Q5SYL3 2234 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Pcm1Q9R0L6 2025 aa9.17□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Olfr548-ps1A0A1B0GSG0 314 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Wdr25E9Q349 535 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Gm21834J3QN05 151 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Slc18a3O35304 530 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Gng3P63216 75 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Gpr135Q7TQP2 457 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Olfr205Q7TS37 305 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Lhfpl2Q8BGA2 222 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Xkr8Q8C0T0 401 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Mr1Q8HWB0 341 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Acer2Q8VD53 275 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Slc25a22Q9D6M3 323 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Thbs4Q9Z1T2 963 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Stc2O88452 296 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Il4P07750 140 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Zp3P10761 424 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 P18524 117 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Cnr1P47746 473 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Nupl2Q8CIC2 420 aaKnown RBP9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Olfr46Q8VGJ4 318 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Q9CQT9 129 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Syt13Q9EQT6 426 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Trex2Q9R1A9 236 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Prss1Q9Z1R9 246 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Gm28285A0A087WQ54 102 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Olfr1039A2ARY0 319 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Gm15130F6PYN5 206 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Gm10750Q3V0I0 133 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 CybaQ61462 192 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Olfr1287Q7TQY1 305 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Tssk5Q8C1R0 372 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Olfr1412Q8VET3 321 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Olfr827Q8VEV5 322 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Tceal6Q9DB24 200 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Wdr4Q9EP82 413 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Sectm1bQ9JL59 212 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Syt11Q9R0N3 430 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Mmp16Q9WTR0 607 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Dock1Q8BUR4 1865 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Thsd7bQ6P4U0 1607 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Olfr1097A2AVA9 315 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 BC048679D3YXE9 172 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Susd5G3UW60 619 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Tmem178bM0QWJ9 172 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 P01661 131 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 P01662 111 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 P01663 111 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Hspb1P14602 209 aaKnown RBP9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Upk2P38575 184 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Ccl9P51670 122 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Zfp30Q60585 533 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Glra1Q64018 457 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Slc22a27Q76M72 551 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 1810024B03RikQ8BWE1 200 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 A930004D18RikQ8C8W7 157 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Lgi3Q8K406 548 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Olfr1151Q8VFQ8 308 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Tmem126bQ9D1R1 230 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Slc2a8Q9JIF3 477 aa9.16□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Gm10358A0A1D5RLD8 333 aa9.15□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Gm14597A2CFG5 200 aa9.15□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 IfngP01580 155 aa9.15□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 GapdhP16858 333 aaKnown RBP9.15□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Mep1aP28825 747 aa9.15□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Ccr8P56484 353 aa9.15□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Il9rQ01114 468 aa9.15□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 AstlQ6HA09 435 aa9.15□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms