RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Zfp52Q8BJ45 724 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Smim37Q8BT35 56 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Olfr642Q924X8 314 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Rtl8bQ9D1F0 113 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 GlceQ9EPS3 618 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Syt6Q9R0N8 511 aa14.41□□□□□ -0.1
Shh-201ENSMUST00000002708 Bod1lE9Q6J5 3032 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 MgaA2AWL7 3003 aaKnown RBP14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 SpxD3Z752 116 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Zfp108E9Q8I5 642 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Zfand5O88878 213 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Rps2P25444 293 aaKnown RBP14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 FauP35545 74 aaKnown RBP14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Upk2P38575 184 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Cdx2P43241 311 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 SnrpeP62305 92 aaKnown RBP14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Rsu1Q01730 277 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Nhlh1Q02576 133 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Kiaa0895lQ810A5 467 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Vmn1r211Q8R266 298 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Olfr1301Q8VGE7 312 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Cited4Q9WUL8 182 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Angptl4Q9Z1P8 410 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Gm14409A2ARR8 349 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Gm9047B9EJX3 177 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Itln1O88310 313 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 P04945 108 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Oprm1P42866 398 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Cyb5aP56395 134 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Hist1h2baP70696 127 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Vmn1r236Q05A06 334 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Tex52Q3TTI8 308 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Ewsr1Q61545 655 aaKnown RBP14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Slc35e1Q8CD26 409 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Adhfe1Q8R0N6 465 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Tmem267Q8VDR5 215 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Tex101Q9JMI7 250 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 SnapinQ9Z266 136 aa14.4□□□□□ -0.1
Shh-201ENSMUST00000002708 Znf551B2RUI1 696 aa14.39□□□□□ -0.11
Shh-201ENSMUST00000002708 CycsP62897 105 aaKnown RBP14.39□□□□□ -0.11
Shh-201ENSMUST00000002708 Taf9bQ6NZA9 249 aa14.39□□□□□ -0.11
Shh-201ENSMUST00000002708 Plekha1Q8BUL6 383 aa14.39□□□□□ -0.11
Shh-201ENSMUST00000002708 MetrnQ8C1Q4 291 aa14.39□□□□□ -0.11
Shh-201ENSMUST00000002708 Ferd3lQ923Z4 168 aa14.39□□□□□ -0.11
Shh-201ENSMUST00000002708 Arrdc2Q9D668 407 aa14.39□□□□□ -0.11
Shh-201ENSMUST00000002708 Sec11cQ9D8V7 192 aa14.39□□□□□ -0.11
Shh-201ENSMUST00000002708 Prr19B2RW88 366 aa14.39□□□□□ -0.11
Shh-201ENSMUST00000002708 Gm11009F7CWA7 138 aa14.39□□□□□ -0.11
Shh-201ENSMUST00000002708 Tgfbr3O88393 850 aa14.39□□□□□ -0.11
Shh-201ENSMUST00000002708 Saa2P05367 122 aa14.39□□□□□ -0.11
Shh-201ENSMUST00000002708 Gpr85P60894 370 aa14.39□□□□□ -0.11
Shh-201ENSMUST00000002708 Rasd2P63032 266 aa14.39□□□□□ -0.11
Shh-201ENSMUST00000002708 Elavl2Q60899 360 aaKnown RBP14.39□□□□□ -0.11
Shh-201ENSMUST00000002708 Rsl1Q7M6Y1 485 aa14.39□□□□□ -0.11
Shh-201ENSMUST00000002708 Xkr8Q8C0T0 401 aa14.39□□□□□ -0.11
Shh-201ENSMUST00000002708 Lrrc25Q8K1T1 297 aa14.39□□□□□ -0.11
Shh-201ENSMUST00000002708 Lgi3Q8K406 548 aa14.39□□□□□ -0.11
Shh-201ENSMUST00000002708 Zdhhc4Q9D6H5 343 aa14.39□□□□□ -0.11
Shh-201ENSMUST00000002708 Ints1Q6P4S8 2195 aa14.39□□□□□ -0.11
Shh-201ENSMUST00000002708 Slc18b1D3Z5L6 459 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Gm43517E9PYS1 339 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Gm5225J3QPL3 108 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 S1pr1O08530 382 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Lsm5P62322 91 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Olfr50Q8VGK5 312 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Arrdc1Q99KN1 434 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Teddm3Q9CQH1 294 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Lipt2Q9D009 231 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Rcl1Q9JJT0 373 aaKnown RBP14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Tnfrsf19Q9JLL3 416 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Vmn2r66K7N6R9 851 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 C1ql1O88992 258 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Igh-VJ558P01758 117 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Rab18P35293 206 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Cbr1P48758 277 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Il18P70380 192 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Zfp772Q3UQL6 416 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Fam196aQ3USH1 422 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Gramd2aQ3V3G7 320 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Defb46Q4QY34 57 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Olfr323Q5NCD0 323 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Ppp1r14dQ7TT52 146 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Arl14epQ8BIX3 276 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Pla2g3Q8BZT7 504 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Ndufa6Q9CQZ5 131 aaKnown RBP14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Elovl1Q9JLJ5 279 aa14.38□□□□□ -0.11
Shh-201ENSMUST00000002708 Trbv12-1A0A0B4J1H0 124 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Tgfbr3lD3YZZ2 297 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Olfr740E9PV79 311 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Cxcl10P17515 98 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 CryabP23927 175 aaKnown RBP14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 RelbQ04863 558 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Vax1Q2NKI2 338 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Gm826Q3UQ74 109 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Sat2Q6P8J2 170 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Cypt4Q6P925 153 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Lnx2Q91XL2 687 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Mcts1Q9DB27 181 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Ergic1Q9DC16 290 aaKnown RBP14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Dtd1Q9DD18 209 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms