RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 RPUSD1Q9UJJ7 312 aaKnown RBP10.18□□□□□ -0.78
LINC00339-213ENST00000642137 ELF5Q9UKW6 265 aaPredicted RBP10.18□□□□□ -0.78
LINC00339-213ENST00000642137 KIR2DS1A0A191URI9 304 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 A0A1W2PPH5 198 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 CTDSPLO15194 276 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 PPIAL4GP0DN37 164 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 CGB3P0DN86 165 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 CGB7P0DN87 165 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 CBX5P45973 191 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 LCN2P80188 198 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 PAX2Q02962 417 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 IL18Q14116 193 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 TMEM249Q2WGJ8 235 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 SPANXN2Q5MJ10 180 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 TMEM200BQ69YZ2 307 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 ZNF880Q6PDB4 577 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 FAM131AQ6UXB0 335 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 SPNS3Q6ZMD2 512 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 ZNF554Q86TJ5 538 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 DACT3Q96B18 629 aaPredicted RBP10.17□□□□□ -0.78
LINC00339-213ENST00000642137 OCSTAMPQ9BR26 566 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 SCPEP1Q9HB40 452 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 C19orf12Q9NSK7 152 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 MBNL3Q9NUK0 354 aaKnown RBP10.17□□□□□ -0.78
LINC00339-213ENST00000642137 TAS2R3Q9NYW6 316 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 OPN4Q9UHM6 478 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 TRAPPC2LQ9UL33 140 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 MGAT4AQ9UM21 535 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 UBE2J1Q9Y385 318 aaPredicted RBP10.17□□□□□ -0.78
LINC00339-213ENST00000642137 LINC00312Q9Y6C7 94 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 ARHGAP32A7KAX9 2087 aa10.17□□□□□ -0.78
LINC00339-213ENST00000642137 KIAA2026Q5HYC2 2103 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 TRGV10A0A0A0MS01 117 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 A0A0G2JMP0 313 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 A0A0X1KG70 313 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 CYSRT1A8MQ03 144 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 C22orf46C9J442 243 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 ENSAO43768 121 aaKnown RBP10.16□□□□□ -0.78
LINC00339-213ENST00000642137 ORC5O43913 435 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 MSMBP08118 114 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 IGHV4-31P0DP07 118 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 PTHLHP12272 177 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 DTYMKP23919 212 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 MRPS10P82664 201 aaKnown RBP10.16□□□□□ -0.78
LINC00339-213ENST00000642137 ZNF45Q02386 682 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 C6orf183Q5T699 404 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 CYB5R2Q6BCY4 276 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 TRAT1Q6PIZ9 186 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 SNX29P2Q8IUI4 249 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 FAM185AQ8N0U4 392 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 CIARTQ8N365 385 aaPredicted RBP10.16□□□□□ -0.78
LINC00339-213ENST00000642137 MAPK1IP1LQ8NDC0 245 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 OR4M2Q8NGB6 313 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 OR4K15Q8NH41 348 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 GPX8Q8TED1 209 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 CCDC107Q8WV48 283 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 S100ZQ8WXG8 99 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 HDHD3Q9BSH5 251 aaPredicted RBP10.16□□□□□ -0.78
LINC00339-213ENST00000642137 CHMP1AQ9HD42 196 aaPredicted RBP10.16□□□□□ -0.78
LINC00339-213ENST00000642137 Q9N2K0 584 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 C12orf4Q9NQ89 552 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 ASH1LQ9NR48 2969 aaKnown RBP10.16□□□□□ -0.78
LINC00339-213ENST00000642137 CSMD2Q7Z408 3487 aa10.16□□□□□ -0.78
LINC00339-213ENST00000642137 TRAV20A0A0B4J274 112 aa10.15□□□□□ -0.78
LINC00339-213ENST00000642137 IGHV2-70DA0A0C4DH43 119 aa10.15□□□□□ -0.78
LINC00339-213ENST00000642137 A0A1W2PQ09 198 aa10.15□□□□□ -0.78
LINC00339-213ENST00000642137 ZNF729A6NN14 1252 aaPredicted RBP10.15□□□□□ -0.78
LINC00339-213ENST00000642137 SSX5O60225 188 aa10.15□□□□□ -0.78
LINC00339-213ENST00000642137 MADCAM1Q13477 382 aa10.15□□□□□ -0.78
LINC00339-213ENST00000642137 Q6ZS49 121 aa10.15□□□□□ -0.78
LINC00339-213ENST00000642137 C1orf122Q6ZSJ8 110 aa10.15□□□□□ -0.78
LINC00339-213ENST00000642137 MOB1BQ7L9L4 216 aa10.15□□□□□ -0.78
LINC00339-213ENST00000642137 OR13A1Q8NGR1 328 aa10.15□□□□□ -0.78
LINC00339-213ENST00000642137 NUDCD2Q8WVJ2 157 aa10.15□□□□□ -0.78
LINC00339-213ENST00000642137 FCAMRQ8WWV6 532 aa10.15□□□□□ -0.78
LINC00339-213ENST00000642137 MSI2Q96DH6 328 aaKnown RBP10.15□□□□□ -0.78
LINC00339-213ENST00000642137 RAB9BQ9NP90 201 aa10.15□□□□□ -0.78
LINC00339-213ENST00000642137 MMP26Q9NRE1 261 aa10.15□□□□□ -0.78
LINC00339-213ENST00000642137 KCNIP1Q9NZI2 227 aa10.15□□□□□ -0.78
LINC00339-213ENST00000642137 INSIG2Q9Y5U4 225 aa10.15□□□□□ -0.78
LINC00339-213ENST00000642137 V9GYH0 126 aa10.15□□□□□ -0.78
LINC00339-213ENST00000642137 MED13LQ71F56 2210 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 MEIOCA2RUB1 952 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 C17orf98A8MV24 154 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 GABARAPH6UMI1 98 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 M0R1W7 72 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 SMAD7O15105 426 aaKnown RBP10.14□□□□□ -0.79
LINC00339-213ENST00000642137 GSTZ1O43708 216 aaPredicted RBP10.14□□□□□ -0.79
LINC00339-213ENST00000642137 RBBP9O75884 186 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 TGFAP01135 160 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 LPLP06858 475 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 FCGR3AP08637 254 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 ZNF728P0DKX0 622 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 NAT1P18440 290 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 RCC1P18754 421 aaPredicted RBP10.14□□□□□ -0.79
LINC00339-213ENST00000642137 GATA3P23771 443 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 DVL1P1P54792 670 aaPredicted RBP10.14□□□□□ -0.79
LINC00339-213ENST00000642137 DLX6P56179 175 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 SSBP1Q04837 148 aaKnown RBP10.14□□□□□ -0.79
LINC00339-213ENST00000642137 PAX8Q06710 450 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms