RNA–Protein interactions for RNA: ENST00000640431.1

PAX6-271, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-271ENST00000640431 NRN1LQ496H8 165 aa13.1□□□□□ -0.31
PAX6-271ENST00000640431 FAM76BQ5HYJ3 339 aa13.1□□□□□ -0.31
PAX6-271ENST00000640431 GPR157Q5UAW9 335 aa13.1□□□□□ -0.31
PAX6-271ENST00000640431 C9orf135Q5VTT2 229 aa13.1□□□□□ -0.31
PAX6-271ENST00000640431 MEX3BQ6ZN04 569 aaKnown RBP13.1□□□□□ -0.31
PAX6-271ENST00000640431 C5orf24Q7Z6I8 188 aa13.1□□□□□ -0.31
PAX6-271ENST00000640431 LINC00518Q8N0U6 118 aa13.1□□□□□ -0.31
PAX6-271ENST00000640431 Q8NFD4 153 aa13.1□□□□□ -0.31
PAX6-271ENST00000640431 HPSE2Q8WWQ2 592 aa13.1□□□□□ -0.31
PAX6-271ENST00000640431 PAPOLGQ9BWT3 736 aaKnown RBP13.1□□□□□ -0.31
PAX6-271ENST00000640431 SLC7A10Q9NS82 523 aa13.1□□□□□ -0.31
PAX6-271ENST00000640431 FBXO9Q9UK97 447 aaPredicted RBP13.1□□□□□ -0.31
PAX6-271ENST00000640431 COL12A1Q99715 3063 aa13.1□□□□□ -0.31
PAX6-271ENST00000640431 IGKV3D-15A0A087WSY6 115 aa13.09□□□□□ -0.31
PAX6-271ENST00000640431 A0A096LPE4 126 aa13.09□□□□□ -0.31
PAX6-271ENST00000640431 BORCS7-ASMTA0A0B4J1R7 106 aa13.09□□□□□ -0.31
PAX6-271ENST00000640431 A0A1W2PPZ6 126 aa13.09□□□□□ -0.31
PAX6-271ENST00000640431 RPL36A-HNRNPH2H7BZ11 118 aa13.09□□□□□ -0.31
PAX6-271ENST00000640431 ST8SIA3O43173 380 aa13.09□□□□□ -0.31
PAX6-271ENST00000640431 SEC11BP0C7V7 166 aa13.09□□□□□ -0.31
PAX6-271ENST00000640431 SPP1P10451 314 aa13.09□□□□□ -0.31
PAX6-271ENST00000640431 CCL2P13500 99 aa13.09□□□□□ -0.31
PAX6-271ENST00000640431 CCNOP22674 350 aa13.09□□□□□ -0.31
PAX6-271ENST00000640431 ARF1P84077 181 aaKnown RBP13.09□□□□□ -0.31
PAX6-271ENST00000640431 NHLH2Q02577 135 aa13.09□□□□□ -0.31
PAX6-271ENST00000640431 SRYQ05066 204 aa13.09□□□□□ -0.31
PAX6-271ENST00000640431 KLRB1Q12918 225 aa13.09□□□□□ -0.31
PAX6-271ENST00000640431 MIDNQ504T8 468 aa13.09□□□□□ -0.31
PAX6-271ENST00000640431 OR2M7Q8NG81 312 aa13.09□□□□□ -0.31
PAX6-271ENST00000640431 RXFP4Q8TDU9 374 aa13.09□□□□□ -0.31
PAX6-271ENST00000640431 SECTM1Q8WVN6 248 aa13.09□□□□□ -0.31
PAX6-271ENST00000640431 SLAMF9Q96A28 289 aa13.09□□□□□ -0.31
PAX6-271ENST00000640431 AKR1E2Q96JD6 320 aa13.09□□□□□ -0.31
PAX6-271ENST00000640431 HS3ST6Q96QI5 342 aa13.09□□□□□ -0.31
PAX6-271ENST00000640431 TMED3Q9Y3Q3 217 aa13.09□□□□□ -0.31
PAX6-271ENST00000640431 ZNF175Q9Y473 711 aa13.09□□□□□ -0.31
PAX6-271ENST00000640431 C3orf85A0A1B0GTC6 90 aa13.08□□□□□ -0.31
PAX6-271ENST00000640431 MPPED1O15442 326 aa13.08□□□□□ -0.31
PAX6-271ENST00000640431 GLAP06280 429 aa13.08□□□□□ -0.31
PAX6-271ENST00000640431 SNCAP37840 140 aa13.08□□□□□ -0.31
PAX6-271ENST00000640431 FOXG1P55316 489 aaPredicted RBP13.08□□□□□ -0.31
PAX6-271ENST00000640431 PRDX4Q13162 271 aa13.08□□□□□ -0.31
PAX6-271ENST00000640431 USB1Q9BQ65 265 aaKnown RBP13.08□□□□□ -0.31
PAX6-271ENST00000640431 REPIN1Q9BWE0 567 aaKnown RBP13.08□□□□□ -0.31
PAX6-271ENST00000640431 SH3BGRL3Q9H299 93 aa13.08□□□□□ -0.31
PAX6-271ENST00000640431 PLSCR2Q9NRY7 297 aa13.08□□□□□ -0.31
PAX6-271ENST00000640431 CACFD1Q9UGQ2 172 aa13.08□□□□□ -0.31
PAX6-271ENST00000640431 ATPIF1Q9UII2 106 aa13.08□□□□□ -0.31
PAX6-271ENST00000640431 BOKQ9UMX3 212 aaPredicted RBP13.08□□□□□ -0.31
PAX6-271ENST00000640431 MEX3AA1L020 520 aaKnown RBP13.08□□□□□ -0.32
PAX6-271ENST00000640431 ZNF503-AS2A6NEH8 195 aa13.08□□□□□ -0.32
PAX6-271ENST00000640431 TSPAN15O95858 294 aa13.08□□□□□ -0.32
PAX6-271ENST00000640431 GNRHRP30968 328 aa13.08□□□□□ -0.32
PAX6-271ENST00000640431 FHITP49789 147 aa13.08□□□□□ -0.32
PAX6-271ENST00000640431 LHX2P50458 406 aa13.08□□□□□ -0.32
PAX6-271ENST00000640431 ETV3LQ6ZN32 361 aa13.08□□□□□ -0.32
PAX6-271ENST00000640431 SNRNP40Q96DI7 357 aaKnown RBP13.08□□□□□ -0.32
PAX6-271ENST00000640431 SCRT1Q9BWW7 348 aa13.08□□□□□ -0.32
PAX6-271ENST00000640431 LINC00470Q9BZP3 86 aa13.08□□□□□ -0.32
PAX6-271ENST00000640431 DNAJC13O75165 2243 aa13.08□□□□□ -0.32
PAX6-271ENST00000640431 FAM90A10PA6NDY2 464 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 FAM90A18PA6NE21 464 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 FAM90A16PA6NEW6 464 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 FAM90A20PA6NIJ5 464 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 FAM90A8PA6NJQ4 464 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 FAM90A7PA6NKC0 464 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 FAM90A22PA8MWA6 464 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 FAM90A12PA8MX19 464 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 FAM90A5PA8MXJ8 464 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 FAM90A23PA8MXZ1 464 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 HLA-HP01893 362 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 CRYBA1P05813 215 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 FAM90A15PP0C7V4 464 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 FAM90A13PP0C7W8 464 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 FAM90A14PP0C7W9 464 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 FAM90A24PP0C7X0 464 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 HAAOP46952 286 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 KCNJ3P48549 501 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 RAB13P51153 203 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 GPM6AP51674 278 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 ZNF616Q08AN1 781 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 Q6ZS49 121 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 TUSC5Q8IXB3 177 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 ZNF843Q8N446 348 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 POM121Q96HA1 1249 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 TTTY12Q9BZ98 90 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 C11orf1Q9H5F2 150 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 ZNF703Q9H7S9 590 aaPredicted RBP13.07□□□□□ -0.32
PAX6-271ENST00000640431 Q9N2K0 584 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 IL36RNQ9UBH0 155 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 LIPGQ9Y5X9 500 aa13.07□□□□□ -0.32
PAX6-271ENST00000640431 C5orf49A4QMS7 147 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 NKX2-6A6NCS4 301 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 TRDCB7Z8K6 153 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 MAGEA5P43359 124 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 PPT1P50897 306 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 UCP2P55851 309 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 CLDN18P56856 261 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 FGF12P61328 243 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 DPPA2Q7Z7J5 298 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms