RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 SYNGR2O43760 224 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 PLAC9Q5JTB6 97 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 ZNF429Q86V71 674 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 PTX4Q96A99 478 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 MRGPRFQ96AM1 343 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 MYOZ1Q9NP98 299 aaPredicted RBP12.5□□□□□ -0.41
SCARB2-208ENST00000638372 FTH1P19P0C7X4 201 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 FGF8P55075 233 aaPredicted RBP12.5□□□□□ -0.41
SCARB2-208ENST00000638372 RSPO4Q2I0M5 234 aaPredicted RBP12.5□□□□□ -0.41
SCARB2-208ENST00000638372 TMEM211Q6ICI0 200 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 HES4Q9HCC6 221 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 MED13LQ71F56 2210 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 CADP27708 2225 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 MAP1LC3B2A6NCE7 125 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 NKX2-6A6NCS4 301 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 NPIPB9F8W1W9 429 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 PPIHO43447 177 aaKnown RBP12.5□□□□□ -0.41
SCARB2-208ENST00000638372 CYC1P08574 325 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 DEFA6Q01524 100 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 UQCC3Q6UW78 93 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 CLRN3Q8NCR9 226 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 MAP1LC3BQ9GZQ8 125 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 ZNF835Q9Y2P0 537 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 ANKRD36A6QL64 1941 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 MYO7BQ6PIF6 2116 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 hADV38S2A0JD32 116 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 COX7A2P2O60397 106 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 DBX2Q6ZNG2 339 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 OR6C3Q9NZP0 311 aa12.5□□□□□ -0.41
SCARB2-208ENST00000638372 OR5H1A6NKK0 313 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 RGS13O14921 159 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 RPS2P15880 293 aaKnown RBP12.49□□□□□ -0.41
SCARB2-208ENST00000638372 AESQ08117 197 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 IGFBP7Q16270 282 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 TMEM230Q96A57 120 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 GMPPAQ96IJ6 420 aaPredicted RBP12.49□□□□□ -0.41
SCARB2-208ENST00000638372 LINC00052Q96N35 136 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 ONECUT1Q9UBC0 465 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 A0A1W2PRD5 423 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 A0A1W2PRF3 423 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 A0A1W2PRM7 423 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 DYNLT3P51808 116 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 SNAI3Q3KNW1 292 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 VMA21Q3ZAQ7 101 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 TRBV5-7A0A0A0MS05 114 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 TOX4O94842 621 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 RBM11P57052 281 aaKnown RBP12.49□□□□□ -0.41
SCARB2-208ENST00000638372 KHDC1LQ5JSQ8 128 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 LYPD8Q6UX82 237 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 NCBP2LA6PVI3 153 aaKnown RBP12.49□□□□□ -0.41
SCARB2-208ENST00000638372 CT45A10P0DMU9 189 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 MRPS11P82912 194 aaKnown RBP12.49□□□□□ -0.41
SCARB2-208ENST00000638372 ZNF154Q13106 437 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 ZNF260Q3ZCT1 412 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 TMEM255AQ5JRV8 349 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 SMIM15Q7Z3B0 74 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 RPEQ96AT9 228 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 PRSS50Q9UI38 385 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 DOCK4Q8N1I0 1966 aa12.49□□□□□ -0.41
SCARB2-208ENST00000638372 UNQ9370/PRO34162Q6UXP9 181 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 OR5D13Q8NGL4 314 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 OR5B3Q8NH48 314 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 ALX4Q9H161 411 aaPredicted RBP12.48□□□□□ -0.41
SCARB2-208ENST00000638372 AMDHD2Q9Y303 409 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 LEUTXA8MZ59 168 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 BPIFB3P59826 476 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 INO80CQ6PI98 192 aaPredicted RBP12.48□□□□□ -0.41
SCARB2-208ENST00000638372 BTNL8Q6UX41 500 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 COMMD1Q8N668 190 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 FAM181AQ8N9Y4 354 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 FAM206AQ9NX38 181 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 ABCA4P78363 2273 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 ZNF320A2RRD8 509 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 FCGR3AP08637 254 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 NTF3P20783 257 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 OPRK1P41145 380 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 FABP9Q0Z7S8 132 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 IGSF11Q5DX21 431 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 TEX30Q5JUR7 227 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 C1orf100Q5SVJ3 147 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 FAM24BQ8N5W8 94 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 CTDSP1Q9GZU7 261 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 SLC35B3Q9H1N7 401 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 RYDENQ9NUL5 291 aaKnown RBP12.48□□□□□ -0.41
SCARB2-208ENST00000638372 OR2W1Q9Y3N9 320 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 CRYM-AS1A6NIL9 109 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 ISG15P05161 165 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 FAM214BQ7L5A3 538 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 CACFD1Q9UGQ2 172 aa12.48□□□□□ -0.41
SCARB2-208ENST00000638372 IGKV3D-11A0A0A0MRZ8 115 aa12.47□□□□□ -0.41
SCARB2-208ENST00000638372 LNP1A1A4G5 178 aa12.47□□□□□ -0.41
SCARB2-208ENST00000638372 CSN1S1P47710 185 aa12.47□□□□□ -0.41
SCARB2-208ENST00000638372 RAB7AP51149 207 aa12.47□□□□□ -0.41
SCARB2-208ENST00000638372 KDF1Q8NAX2 398 aaPredicted RBP12.47□□□□□ -0.41
SCARB2-208ENST00000638372 SRXN1Q9BYN0 137 aa12.47□□□□□ -0.41
SCARB2-208ENST00000638372 RD3LP0DJH9 198 aa12.47□□□□□ -0.41
SCARB2-208ENST00000638372 SIGIRRQ6IA17 410 aa12.47□□□□□ -0.41
SCARB2-208ENST00000638372 TMEM56Q96MV1 263 aa12.47□□□□□ -0.41
SCARB2-208ENST00000638372 SAP30LQ9HAJ7 183 aa12.47□□□□□ -0.41
SCARB2-208ENST00000638372 IGHV3OR15-7A0A075B7D8 119 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms