RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 DTX1Q86Y01 620 aa13.45□□□□□ -0.26
CACNA1A-235ENST00000637004 TGIF2LYQ8IUE0 185 aa13.45□□□□□ -0.26
CACNA1A-235ENST00000637004 ODF3L1Q8IXM7 274 aa13.45□□□□□ -0.26
CACNA1A-235ENST00000637004 PRR18Q8N4B5 295 aa13.45□□□□□ -0.26
CACNA1A-235ENST00000637004 POC1BQ8TC44 478 aa13.45□□□□□ -0.26
CACNA1A-235ENST00000637004 P4HTMQ9NXG6 502 aa13.45□□□□□ -0.26
CACNA1A-235ENST00000637004 RNF150Q9ULK6 438 aa13.45□□□□□ -0.26
CACNA1A-235ENST00000637004 LOC102725191A0A1B0GVB3 256 aa13.44□□□□□ -0.26
CACNA1A-235ENST00000637004 XKRY2A2RUG3 117 aa13.44□□□□□ -0.26
CACNA1A-235ENST00000637004 TMEM50AO95807 157 aa13.44□□□□□ -0.26
CACNA1A-235ENST00000637004 VDAC1P21796 283 aa13.44□□□□□ -0.26
CACNA1A-235ENST00000637004 COL10A1Q03692 680 aa13.44□□□□□ -0.26
CACNA1A-235ENST00000637004 BRICD5Q6PL45 260 aa13.44□□□□□ -0.26
CACNA1A-235ENST00000637004 ASCL4Q6XD76 172 aa13.44□□□□□ -0.26
CACNA1A-235ENST00000637004 OSR2Q8N2R0 312 aa13.44□□□□□ -0.26
CACNA1A-235ENST00000637004 OR2V1Q8NHB1 315 aa13.44□□□□□ -0.26
CACNA1A-235ENST00000637004 THAP3Q8WTV1 239 aaPredicted RBP13.44□□□□□ -0.26
CACNA1A-235ENST00000637004 HIST1H2AAQ96QV6 131 aa13.44□□□□□ -0.26
CACNA1A-235ENST00000637004 EP300Q09472 2414 aaPredicted RBP13.44□□□□□ -0.26
CACNA1A-235ENST00000637004 ZNF814B7Z6K7 855 aa13.44□□□□□ -0.26
CACNA1A-235ENST00000637004 CHST1O43916 411 aa13.44□□□□□ -0.26
CACNA1A-235ENST00000637004 GABRG2P18507 467 aa13.44□□□□□ -0.26
CACNA1A-235ENST00000637004 GNRHRP30968 328 aa13.44□□□□□ -0.26
CACNA1A-235ENST00000637004 ZXDAP98168 799 aa13.44□□□□□ -0.26
CACNA1A-235ENST00000637004 TNFRSF9Q07011 255 aa13.44□□□□□ -0.26
CACNA1A-235ENST00000637004 SPIN3Q5JUX0 258 aa13.44□□□□□ -0.26
CACNA1A-235ENST00000637004 BORCS8Q96FH0 119 aa13.44□□□□□ -0.26
CACNA1A-235ENST00000637004 PYGO2Q9BRQ0 406 aa13.44□□□□□ -0.26
CACNA1A-235ENST00000637004 GAB2Q9UQC2 676 aa13.44□□□□□ -0.26
CACNA1A-235ENST00000637004 MUC6Q6W4X9 2439 aa13.44□□□□□ -0.26
CACNA1A-235ENST00000637004 PDCD6O75340 191 aa13.43□□□□□ -0.26
CACNA1A-235ENST00000637004 G0S2P27469 103 aa13.43□□□□□ -0.26
CACNA1A-235ENST00000637004 CLDN17P56750 224 aa13.43□□□□□ -0.26
CACNA1A-235ENST00000637004 ENDOGQ14249 297 aaKnown RBP13.43□□□□□ -0.26
CACNA1A-235ENST00000637004 RSPO1Q2MKA7 263 aaPredicted RBP13.43□□□□□ -0.26
CACNA1A-235ENST00000637004 PIGYQ3MUY2 71 aa13.43□□□□□ -0.26
CACNA1A-235ENST00000637004 LHFPL2Q6ZUX7 228 aa13.43□□□□□ -0.26
CACNA1A-235ENST00000637004 SIGLEC12Q96PQ1 595 aa13.43□□□□□ -0.26
CACNA1A-235ENST00000637004 ZNF665Q9H7R5 613 aa13.43□□□□□ -0.26
CACNA1A-235ENST00000637004 IGHV3-20A0A0C4DH32 117 aa13.43□□□□□ -0.26
CACNA1A-235ENST00000637004 AQP7P3A6NL99 342 aa13.43□□□□□ -0.26
CACNA1A-235ENST00000637004 IFNA1P01562 189 aa13.43□□□□□ -0.26
CACNA1A-235ENST00000637004 MDKP21741 143 aaPredicted RBP13.43□□□□□ -0.26
CACNA1A-235ENST00000637004 CLN3Q13286 438 aa13.43□□□□□ -0.26
CACNA1A-235ENST00000637004 SHBQ15464 509 aa13.43□□□□□ -0.26
CACNA1A-235ENST00000637004 NMSQ5H8A3 153 aa13.43□□□□□ -0.26
CACNA1A-235ENST00000637004 OR1L3Q8NH93 324 aa13.43□□□□□ -0.26
CACNA1A-235ENST00000637004 SCGB1C1Q8TD33 95 aa13.43□□□□□ -0.26
CACNA1A-235ENST00000637004 MBD3L1Q8WWY6 194 aa13.43□□□□□ -0.26
CACNA1A-235ENST00000637004 DNASE2BQ8WZ79 361 aa13.43□□□□□ -0.26
CACNA1A-235ENST00000637004 TPSD1Q9BZJ3 242 aa13.43□□□□□ -0.26
CACNA1A-235ENST00000637004 ST3GAL6Q9Y274 331 aa13.43□□□□□ -0.26
CACNA1A-235ENST00000637004 C10orf142B7Z368 130 aa13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 PPP5D1E7EU14 171 aa13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 MBP02144 154 aa13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 TCN2P20062 427 aa13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 RAB4AP20338 218 aa13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 APLNRP35414 380 aa13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 NPBWR2P48146 333 aa13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 CDCP2Q5VXM1 449 aa13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 TMEM18Q96B42 140 aa13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 ADGRG7Q96K78 797 aa13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 RPRMQ9NS64 109 aa13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 PLEK2Q9NYT0 353 aa13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 NAT8Q9UHE5 227 aa13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 TDRD6O60522 2096 aaKnown RBP13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 ZFHX2Q9C0A1 2572 aaPredicted RBP13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 EREGO14944 169 aa13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 OR2J2O76002 312 aa13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 IL18BPO95998 194 aa13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 PFN1P07737 140 aaKnown RBP13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 HIST1H3AP68431 136 aa13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 IQCJQ1A5X6 159 aa13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 ACSF3Q4G176 576 aaPredicted RBP13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 C10orf128Q5T292 105 aa13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 MRGPRGQ86SM5 289 aa13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 MAML2Q8IZL2 1156 aaPredicted RBP13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 RIMS4Q9H426 269 aaPredicted RBP13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 ZNF442Q9H7R0 627 aa13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 RIF1Q5UIP0 2472 aaKnown RBP13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 MYO7BQ6PIF6 2116 aa13.42□□□□□ -0.26
CACNA1A-235ENST00000637004 IGKV1-27A0A075B6S5 117 aa13.41□□□□□ -0.26
CACNA1A-235ENST00000637004 CCDC163A0A0D9SF12 145 aa13.41□□□□□ -0.26
CACNA1A-235ENST00000637004 A0A1B0GX78 115 aa13.41□□□□□ -0.26
CACNA1A-235ENST00000637004 PDLIM4P50479 330 aa13.41□□□□□ -0.26
CACNA1A-235ENST00000637004 SNAI3Q3KNW1 292 aa13.41□□□□□ -0.26
CACNA1A-235ENST00000637004 NCR3LG1Q68D85 454 aa13.41□□□□□ -0.26
CACNA1A-235ENST00000637004 LCN15Q6UWW0 184 aa13.41□□□□□ -0.26
CACNA1A-235ENST00000637004 ZNF66Q6ZN08 573 aa13.41□□□□□ -0.26
CACNA1A-235ENST00000637004 RNF138Q8WVD3 245 aa13.41□□□□□ -0.26
CACNA1A-235ENST00000637004 OR5B12Q96R08 314 aa13.41□□□□□ -0.26
CACNA1A-235ENST00000637004 SLC7A10Q9NS82 523 aa13.41□□□□□ -0.26
CACNA1A-235ENST00000637004 IL36GQ9NZH8 169 aa13.41□□□□□ -0.26
CACNA1A-235ENST00000637004 LAMP3Q9UQV4 416 aa13.41□□□□□ -0.26
CACNA1A-235ENST00000637004 IGLV3-32A0A0A0MS00 114 aa13.41□□□□□ -0.26
CACNA1A-235ENST00000637004 DRD1P21728 446 aa13.41□□□□□ -0.26
CACNA1A-235ENST00000637004 UCP1P25874 307 aa13.41□□□□□ -0.26
CACNA1A-235ENST00000637004 CCKARP32238 428 aa13.41□□□□□ -0.26
CACNA1A-235ENST00000637004 SHISA6Q6ZSJ9 500 aa13.41□□□□□ -0.26
CACNA1A-235ENST00000637004 CEBPZOSA8MTT3 80 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms