RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 Q6ZS52 159 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 GPR137CQ8N3F9 429 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 PLPPR1Q8TBJ4 325 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 SCGB1C1Q8TD33 95 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 SNX22Q96L94 193 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 RAB40CQ96S21 281 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 GPR87Q9BY21 358 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 SRD5A3Q9H8P0 318 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 RNF115Q9Y4L5 304 aa12.76□□□□□ -0.37
CACNA1A-220ENST00000635988 CCDC85CA6NKD9 419 aa12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 IFNA1P01562 189 aa12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 CST2P09228 141 aa12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 CTXN2P0C2S0 81 aa12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 GLB1P16278 677 aa12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 RSPO4Q2I0M5 234 aaPredicted RBP12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 C4orf17Q53FE4 359 aa12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 Q6ZPA2 131 aa12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 C7orf61Q8IZ16 206 aa12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 GAPTQ8N292 157 aa12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 DEFB119Q8N690 84 aa12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 LURAP1Q96LR2 239 aa12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 RASL10BQ96S79 203 aa12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 ACTR3CQ9C0K3 210 aaPredicted RBP12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 TP53TG5Q9Y2B4 290 aa12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 EPOPA6NHQ4 379 aa12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 ZFP92A6NM28 416 aa12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 H0Y980 276 aa12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 PIAS2O75928 621 aa12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 SLC25A6P12236 298 aa12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 S100GP29377 79 aa12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 PAX9P55771 341 aa12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 ZNF818PQ6ZRF7 136 aa12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 PSMG3Q9BT73 122 aaPredicted RBP12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 DEFB126Q9BYW3 111 aa12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 SMOC1Q9H4F8 434 aa12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 C19orf25Q9UFG5 118 aaPredicted RBP12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 VAX2Q9UIW0 290 aa12.75□□□□□ -0.37
CACNA1A-220ENST00000635988 DKK1O94907 266 aa12.74□□□□□ -0.37
CACNA1A-220ENST00000635988 SPCS3P61009 180 aa12.74□□□□□ -0.37
CACNA1A-220ENST00000635988 FBXO46Q6PJ61 603 aaPredicted RBP12.74□□□□□ -0.37
CACNA1A-220ENST00000635988 SYT13Q7L8C5 426 aa12.74□□□□□ -0.37
CACNA1A-220ENST00000635988 MRGPRGQ86SM5 289 aa12.74□□□□□ -0.37
CACNA1A-220ENST00000635988 BEND2Q8NDZ0 799 aa12.74□□□□□ -0.37
CACNA1A-220ENST00000635988 TSTD1Q8NFU3 115 aa12.74□□□□□ -0.37
CACNA1A-220ENST00000635988 CA5BP1Q8WTZ4 195 aa12.74□□□□□ -0.37
CACNA1A-220ENST00000635988 TRANK1O15050 2925 aa12.74□□□□□ -0.37
CACNA1A-220ENST00000635988 KIR2DS1A0A191URI9 304 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 A8MWP6 167 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 NDUFB7P17568 137 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 KIR2DS4P43632 304 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 CLDN15P56746 228 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 NXPH1P58417 271 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 KIR2DS1Q14954 304 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 RNPS1Q15287 305 aaKnown RBP12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 MPV17LQ2QL34 196 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 COA6Q5JTJ3 125 aaKnown RBP12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 PLCXD3Q63HM9 321 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 NAXEQ8NCW5 288 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 EXTL1Q92935 676 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 TPSD1Q9BZJ3 242 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 Q9N2K0 584 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 RPRMQ9NS64 109 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 ZNF816-ZNF321PA0A0X1KG74 233 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 SLC22A20A6NK97 555 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 TUSC2O75896 110 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 SERF2P84101 59 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 ZFP36L1Q07352 338 aaKnown RBP12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 PMS2P11Q13670 270 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 ZNF385CQ66K41 422 aaPredicted RBP12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 ZNF774Q6NX45 483 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 TGIF2LYQ8IUE0 185 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 Q8NFD4 153 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 OR4X1Q8NH49 305 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 CRLF2Q9HC73 371 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 P4HTMQ9NXG6 502 aa12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 CHCHD2Q9Y6H1 151 aaPredicted RBP12.73□□□□□ -0.37
CACNA1A-220ENST00000635988 IGHV3-15A0A0B4J1V0 119 aa12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 hCG_38984A0A1B0GV85 526 aa12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 OR6C6A6NF89 314 aa12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 ATXN7O15265 892 aaPredicted RBP12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 TOX3O15405 576 aaPredicted RBP12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 CNOT4O95628 575 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 GCGP01275 180 aa12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 GZMBP10144 247 aa12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 KRTAP27-1Q3LI81 207 aa12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 UNQ6494/PRO21346Q6UXR6 183 aa12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 OR1P1Q8NH06 330 aa12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 PYGO2Q9BRQ0 406 aa12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 NDUFAF3Q9BU61 184 aa12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 ZNF665Q9H7R5 613 aa12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 TAAR3PQ9P1P4 343 aa12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 RPS18P62269 152 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 PDCD1Q15116 288 aa12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 PRAMEF20Q5VT98 475 aa12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 CDCP2Q5VXM1 449 aa12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 ZNF611Q8N823 705 aa12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 ZIC4Q8N9L1 334 aa12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 NAT6Q93015 286 aa12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 PINX1Q96BK5 328 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 UCN2Q96RP3 112 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms