RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 GSX2Q9BZM3 304 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 ING1Q9UK53 422 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-209ENST00000635750 SLC17A2O00624 439 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 SMAD7O15105 426 aaKnown RBP4.91□□□□□ -1.62
SCN1A-209ENST00000635750 AKR7A2O43488 359 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 OR2A4O95047 310 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 APCSP02743 223 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 GAPDHP04406 335 aaKnown RBP4.91□□□□□ -1.62
SCN1A-209ENST00000635750 ZNF688P0C7X2 276 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 PRR35P0CG20 571 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 SLC37A1P57057 533 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 B2MP61769 119 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 SP6Q3SY56 376 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 INO80CQ6PI98 192 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-209ENST00000635750 TMEM251Q8N6I4 163 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 BEND2Q8NDZ0 799 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 ARHGAP5-AS1Q96IT6 56 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 OR2A7Q96R45 310 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 C11orf68Q9H3H3 251 aaKnown RBP4.91□□□□□ -1.62
SCN1A-209ENST00000635750 PPIAL4EA0A075B759 164 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 SHISA8B8ZZ34 492 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 PPIAL4DF5H284 164 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 RBFOX2O43251 390 aaKnown RBP eCLIP4.91□□□□□ -1.62
SCN1A-209ENST00000635750 CHST1O43916 411 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 PPIAL4FP0DN26 164 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 SLC25A1P53007 311 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 FAM78BQ5VT40 261 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 EAF1Q96JC9 268 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-209ENST00000635750 JMJD8Q96S16 334 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 SLC35B3Q9H1N7 401 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 IL17BQ9UHF5 180 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 FLVCR2Q9UPI3 526 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 PPIAL4AQ9Y536 164 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 LRRC37A3O60309 1634 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 TRAV34A0A0B4J273 112 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 AP4M1O00189 453 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 B4GALT3O60512 393 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 DXOO77932 396 aaKnown RBP4.91□□□□□ -1.62
SCN1A-209ENST00000635750 DYNLT3P51808 116 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 NUBP1P53384 320 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 FAM74A3Q4VXF1 159 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 OR10G8Q8NGN5 311 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 FAM131CQ96AQ9 280 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 USP54Q70EL1 1684 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 RER1O15258 196 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 WNT1P04628 370 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 ZNF137PP52743 207 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 STARD6P59095 220 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 RPL31P62899 125 aaKnown RBP4.91□□□□□ -1.62
SCN1A-209ENST00000635750 ASAH1Q13510 395 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 HLA-DRB5Q30154 266 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 TTC32Q5I0X7 151 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 OR4B1Q8NGF8 309 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 MRPL30Q8TCC3 161 aaKnown RBP4.91□□□□□ -1.62
SCN1A-209ENST00000635750 C10orf35Q96D05 121 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 ORAI1Q96D31 301 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 GMPPAQ96IJ6 420 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-209ENST00000635750 PRSS50Q9UI38 385 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 YLPM1P49750 1951 aaKnown RBP4.91□□□□□ -1.62
SCN1A-209ENST00000635750 CLDN34H7C241 214 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 K7N7A8 449 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 RAB29O14966 203 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 SLC25A20O43772 301 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 CEACAM5P06731 702 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 ADRA2AP08913 450 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 CLEC2LP0C7M8 214 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 HIST1H1DP16402 221 aaKnown RBP4.91□□□□□ -1.62
SCN1A-209ENST00000635750 TMEM33P57088 247 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 RELQ04864 619 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-209ENST00000635750 PDCD1Q15116 288 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 LHFPL5Q8TAF8 219 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 ZNF714Q96N38 554 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 COL25A1Q9BXS0 654 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-209ENST00000635750 BCL2L10Q9HD36 194 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 WSB1Q9Y6I7 421 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 FER1L5A0AVI2 2057 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 ATP5G2Q06055 141 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 SIGLEC14Q08ET2 396 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 WDR74Q6RFH5 385 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-209ENST00000635750 RAB24Q969Q5 203 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 TMEM204Q9BSN7 226 aa4.91□□□□□ -1.62
SCN1A-209ENST00000635750 TMEM189A5PLL7 270 aa4.9□□□□□ -1.62
SCN1A-209ENST00000635750 MBTPS2O43462 519 aa4.9□□□□□ -1.62
SCN1A-209ENST00000635750 SRSF10O75494 262 aaKnown RBP4.9□□□□□ -1.62
SCN1A-209ENST00000635750 RD3LP0DJH9 198 aa4.9□□□□□ -1.62
SCN1A-209ENST00000635750 KIRREL2Q6UWL6 708 aa4.9□□□□□ -1.62
SCN1A-209ENST00000635750 RNF165Q6ZSG1 346 aa4.9□□□□□ -1.62
SCN1A-209ENST00000635750 KCNK17Q96T54 332 aa4.9□□□□□ -1.62
SCN1A-209ENST00000635750 HILPDAQ9Y5L2 63 aa4.9□□□□□ -1.62
SCN1A-209ENST00000635750 OR51B2Q9Y5P1 312 aa4.9□□□□□ -1.62
SCN1A-209ENST00000635750 TAF1P21675 1872 aa4.9□□□□□ -1.62
SCN1A-209ENST00000635750 ZAR1LA6NP61 321 aa4.9□□□□□ -1.62
SCN1A-209ENST00000635750 C11orf94C9JXX5 98 aa4.9□□□□□ -1.62
SCN1A-209ENST00000635750 H3BMH7 237 aa4.9□□□□□ -1.62
SCN1A-209ENST00000635750 FFAR1O14842 300 aa4.9□□□□□ -1.62
SCN1A-209ENST00000635750 GABRB1P18505 474 aa4.9□□□□□ -1.62
SCN1A-209ENST00000635750 MFAP4P55083 255 aa4.9□□□□□ -1.62
SCN1A-209ENST00000635750 TMEM196Q5HYL7 178 aa4.9□□□□□ -1.62
SCN1A-209ENST00000635750 Q6ZSR9 355 aa4.9□□□□□ -1.62
SCN1A-209ENST00000635750 TOGARAM1Q9Y4F4 1720 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms