RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 FAM27D1Q5T7N8 215 aa12.71□□□□□ -0.37
LINC00339-207ENST00000634712 RSBN1Q5VWQ0 802 aaPredicted RBP12.71□□□□□ -0.37
LINC00339-207ENST00000634712 SGMS2Q8NHU3 365 aa12.71□□□□□ -0.37
LINC00339-207ENST00000634712 PHYHIPQ92561 330 aa12.71□□□□□ -0.37
LINC00339-207ENST00000634712 MGLLQ99685 303 aa12.71□□□□□ -0.37
LINC00339-207ENST00000634712 SELENOIQ9C0D9 397 aa12.71□□□□□ -0.37
LINC00339-207ENST00000634712 BANF2Q9H503 90 aa12.71□□□□□ -0.37
LINC00339-207ENST00000634712 GHRLQ9UBU3 117 aa12.71□□□□□ -0.37
LINC00339-207ENST00000634712 RNF114Q9Y508 228 aa12.71□□□□□ -0.37
LINC00339-207ENST00000634712 TMEM30CPA0ZSE6 113 aa12.7□□□□□ -0.38
LINC00339-207ENST00000634712 FAM172BPA6NC97 362 aa12.7□□□□□ -0.38
LINC00339-207ENST00000634712 MCRIP1C9JLW8 97 aa12.7□□□□□ -0.38
LINC00339-207ENST00000634712 PSMA1P25786 263 aaKnown RBP12.7□□□□□ -0.38
LINC00339-207ENST00000634712 RBM39Q14498 530 aaKnown RBP12.7□□□□□ -0.38
LINC00339-207ENST00000634712 C17orf58Q2M2W7 97 aa12.7□□□□□ -0.38
LINC00339-207ENST00000634712 SLC35E4Q6ICL7 350 aa12.7□□□□□ -0.38
LINC00339-207ENST00000634712 BRICD5Q6PL45 260 aa12.7□□□□□ -0.38
LINC00339-207ENST00000634712 Q6ZSV7 163 aa12.7□□□□□ -0.38
LINC00339-207ENST00000634712 OR13A1Q8NGR1 328 aa12.7□□□□□ -0.38
LINC00339-207ENST00000634712 PLPPR1Q8TBJ4 325 aa12.7□□□□□ -0.38
LINC00339-207ENST00000634712 MRGPRDQ8TDS7 321 aa12.7□□□□□ -0.38
LINC00339-207ENST00000634712 CREB3L1Q96BA8 519 aa12.7□□□□□ -0.38
LINC00339-207ENST00000634712 CST11Q9H112 138 aa12.7□□□□□ -0.38
LINC00339-207ENST00000634712 CALYQ9NYX4 217 aa12.7□□□□□ -0.38
LINC00339-207ENST00000634712 ZNF581Q9P0T4 197 aa12.7□□□□□ -0.38
LINC00339-207ENST00000634712 DPM3Q9P2X0 92 aa12.7□□□□□ -0.38
LINC00339-207ENST00000634712 VGLL3A8MV65 326 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 ARL6IP5O75915 188 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 UBBP0CG47 229 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 MGMTP16455 207 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 CPEP16870 476 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 GZMHP20718 246 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 RAB13P51153 203 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 ARHGDIBP52566 201 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 RPS25P62851 125 aaKnown RBP12.69□□□□□ -0.38
LINC00339-207ENST00000634712 PAX5Q02548 391 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 BAIAP2L2Q6UXY1 529 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 LIAT1Q6ZQX7 453 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 DYNAPQ8N1N2 210 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 LINC01006Q8NI28 216 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 IDI2-AS1Q9NZ38 188 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 PITPNC1Q9UKF7 332 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 FAM90A10PA6NDY2 464 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 FAM90A18PA6NE21 464 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 FAM90A16PA6NEW6 464 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 FAM90A20PA6NIJ5 464 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 FAM90A7PA6NKC0 464 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 FAM90A22PA8MWA6 464 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 FAM90A12PA8MX19 464 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 FAM90A5PA8MXJ8 464 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 FAM90A23PA8MXZ1 464 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 LEUTXA8MZ59 168 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 F2RL2O00254 374 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 SC5DO75845 299 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 TSPAN9O75954 239 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 IL1AP01583 271 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 UCHL1P09936 223 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 FAM90A15PP0C7V4 464 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 FAM90A13PP0C7W8 464 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 FAM90A14PP0C7W9 464 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 FAM90A24PP0C7X0 464 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 CD34P28906 385 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 GDNFP39905 211 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 CEACAM3P40198 252 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 GP2P55259 537 aaKnown RBP12.69□□□□□ -0.38
LINC00339-207ENST00000634712 TBCEQ15813 527 aaPredicted RBP12.69□□□□□ -0.38
LINC00339-207ENST00000634712 LTC4SQ16873 150 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 RAB12Q6IQ22 244 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 ZNF367Q7RTV3 350 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 LRRTM1Q86UE6 522 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 LYPD6Q86Y78 171 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 DTX3Q8N9I9 347 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 OR4P4Q8NGL7 312 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 RFESDQ8TAC1 157 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 FAM46BQ96A09 425 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 C16orf95Q9H693 158 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 ZNF286AQ9HBT8 521 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 PEX16Q9Y5Y5 336 aa12.69□□□□□ -0.38
LINC00339-207ENST00000634712 TRAV39A0A0B4J263 110 aa12.68□□□□□ -0.38
LINC00339-207ENST00000634712 DENRO43583 198 aaKnown RBP12.68□□□□□ -0.38
LINC00339-207ENST00000634712 MPIG6BO95866 241 aa12.68□□□□□ -0.38
LINC00339-207ENST00000634712 CGB3P0DN86 165 aa12.68□□□□□ -0.38
LINC00339-207ENST00000634712 CGB7P0DN87 165 aa12.68□□□□□ -0.38
LINC00339-207ENST00000634712 FUT3P21217 361 aa12.68□□□□□ -0.38
LINC00339-207ENST00000634712 GABARAPL2P60520 117 aa12.68□□□□□ -0.38
LINC00339-207ENST00000634712 LDLRAD2Q5SZI1 272 aa12.68□□□□□ -0.38
LINC00339-207ENST00000634712 SVOPQ8N4V2 548 aa12.68□□□□□ -0.38
LINC00339-207ENST00000634712 TMEM104Q8NE00 496 aa12.68□□□□□ -0.38
LINC00339-207ENST00000634712 OR10A7Q8NGE5 316 aa12.68□□□□□ -0.38
LINC00339-207ENST00000634712 OR4C13Q8NGP0 309 aa12.68□□□□□ -0.38
LINC00339-207ENST00000634712 OR9G1Q8NH87 305 aa12.68□□□□□ -0.38
LINC00339-207ENST00000634712 PIFOQ8TCI5 191 aa12.68□□□□□ -0.38
LINC00339-207ENST00000634712 CCDC107Q8WV48 283 aa12.68□□□□□ -0.38
LINC00339-207ENST00000634712 KIRREL1Q96J84 757 aa12.68□□□□□ -0.38
LINC00339-207ENST00000634712 NPFFR1Q9GZQ6 430 aa12.68□□□□□ -0.38
LINC00339-207ENST00000634712 ACOT13Q9NPJ3 140 aa12.68□□□□□ -0.38
LINC00339-207ENST00000634712 ETAA1Q9NY74 926 aa12.68□□□□□ -0.38
LINC00339-207ENST00000634712 TCF19Q9Y242 345 aa12.68□□□□□ -0.38
LINC00339-207ENST00000634712 A0A087X0M5 115 aa12.67□□□□□ -0.38
LINC00339-207ENST00000634712 A0A1B0GX30 115 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms