RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 GLP1RP43220 463 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 RORCP51449 518 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 SRSF2Q01130 221 aaKnown RBP12.1□□□□□ -0.47
PNKP-221ENST00000627317 ZNF273Q14593 569 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 SPCS2Q15005 226 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 TUSC1Q2TAM9 212 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 TMEM200BQ69YZ2 307 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 C6orf201Q7Z4U5 140 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 FAM89BQ8N5H3 189 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 TMEM158Q8WZ71 300 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 KCTD12Q96CX2 325 aaKnown RBP12.1□□□□□ -0.47
PNKP-221ENST00000627317 WDFY2Q96P53 400 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 PCGF1Q9BSM1 259 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 ATG5Q9H1Y0 275 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 PLEKHJ1Q9NW61 149 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 RHBDL2Q9NX52 303 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 OR6C3Q9NZP0 311 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 CEPT1Q9Y6K0 416 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 TENM1Q9UKZ4 2725 aa12.09□□□□□ -0.47
PNKP-221ENST00000627317 hCG_1809904A0A1W2PP81 198 aa12.09□□□□□ -0.47
PNKP-221ENST00000627317 A0A1W2PPE2 198 aa12.09□□□□□ -0.47
PNKP-221ENST00000627317 A0A1W2PR64 198 aa12.09□□□□□ -0.47
PNKP-221ENST00000627317 A0A1W2PRV1 198 aa12.09□□□□□ -0.47
PNKP-221ENST00000627317 SCGNO76038 276 aa12.09□□□□□ -0.47
PNKP-221ENST00000627317 ZNF728P0DKX0 622 aa12.09□□□□□ -0.47
PNKP-221ENST00000627317 CCL3L1P16619 93 aa12.09□□□□□ -0.47
PNKP-221ENST00000627317 PAX5Q02548 391 aa12.09□□□□□ -0.47
PNKP-221ENST00000627317 RSBN1Q5VWQ0 802 aaPredicted RBP12.09□□□□□ -0.47
PNKP-221ENST00000627317 SLC35E4Q6ICL7 350 aa12.09□□□□□ -0.47
PNKP-221ENST00000627317 OR5H6Q8NGV6 325 aa12.09□□□□□ -0.47
PNKP-221ENST00000627317 AP3S1Q92572 193 aa12.09□□□□□ -0.47
PNKP-221ENST00000627317 PHF21AQ96BD5 680 aa12.09□□□□□ -0.47
PNKP-221ENST00000627317 ZNF714Q96N38 554 aa12.09□□□□□ -0.47
PNKP-221ENST00000627317 SULT4A1Q9BR01 284 aa12.09□□□□□ -0.47
PNKP-221ENST00000627317 SPATA2Q9UM82 520 aa12.09□□□□□ -0.47
PNKP-221ENST00000627317 UBE2J1Q9Y385 318 aaPredicted RBP12.09□□□□□ -0.47
PNKP-221ENST00000627317 DSCAML1Q8TD84 2053 aa12.08□□□□□ -0.48
PNKP-221ENST00000627317 CA11O75493 328 aa12.08□□□□□ -0.48
PNKP-221ENST00000627317 SOX6P35712 828 aa12.08□□□□□ -0.48
PNKP-221ENST00000627317 ZNF497Q6ZNH5 498 aa12.08□□□□□ -0.48
PNKP-221ENST00000627317 TCF23Q7RTU1 214 aa12.08□□□□□ -0.48
PNKP-221ENST00000627317 OR10R2Q8NGX6 335 aa12.08□□□□□ -0.48
PNKP-221ENST00000627317 ACOT12Q8WYK0 555 aa12.08□□□□□ -0.48
PNKP-221ENST00000627317 DYRK2Q92630 601 aa12.08□□□□□ -0.48
PNKP-221ENST00000627317 UPRTQ96BW1 309 aa12.08□□□□□ -0.48
PNKP-221ENST00000627317 SLC25A38Q96DW6 304 aa12.08□□□□□ -0.48
PNKP-221ENST00000627317 RAB3CQ96E17 227 aa12.08□□□□□ -0.48
PNKP-221ENST00000627317 ARHGAP5-AS1Q96IT6 56 aa12.08□□□□□ -0.48
PNKP-221ENST00000627317 RBM38Q9H0Z9 239 aaKnown RBP12.08□□□□□ -0.48
PNKP-221ENST00000627317 SIRPDQ9H106 197 aa12.08□□□□□ -0.48
PNKP-221ENST00000627317 GAL3ST2Q9H3Q3 398 aa12.08□□□□□ -0.48
PNKP-221ENST00000627317 NCOR1P1Q9H4R4 102 aa12.08□□□□□ -0.48
PNKP-221ENST00000627317 METTL8Q9H825 291 aaKnown RBP12.08□□□□□ -0.48
PNKP-221ENST00000627317 RSL24D1Q9UHA3 163 aaKnown RBP12.08□□□□□ -0.48
PNKP-221ENST00000627317 HSF4Q9ULV5 492 aa12.08□□□□□ -0.48
PNKP-221ENST00000627317 SMIM31A0A1B0GVY4 71 aa12.07□□□□□ -0.48
PNKP-221ENST00000627317 FOXI3A8MTJ6 420 aaPredicted RBP12.07□□□□□ -0.48
PNKP-221ENST00000627317 MMP9P14780 707 aa12.07□□□□□ -0.48
PNKP-221ENST00000627317 ZNF182P17025 639 aaPredicted RBP12.07□□□□□ -0.48
PNKP-221ENST00000627317 MOGAT2Q3SYC2 334 aa12.07□□□□□ -0.48
PNKP-221ENST00000627317 UBE2NLQ5JXB2 153 aa12.07□□□□□ -0.48
PNKP-221ENST00000627317 MZT2AQ6P582 158 aa12.07□□□□□ -0.48
PNKP-221ENST00000627317 C1orf122Q6ZSJ8 110 aa12.07□□□□□ -0.48
PNKP-221ENST00000627317 Q6ZTK2 550 aa12.07□□□□□ -0.48
PNKP-221ENST00000627317 VMO1Q7Z5L0 202 aa12.07□□□□□ -0.48
PNKP-221ENST00000627317 RTN4RL2Q86UN3 420 aa12.07□□□□□ -0.48
PNKP-221ENST00000627317 SAMD12Q8N8I0 201 aa12.07□□□□□ -0.48
PNKP-221ENST00000627317 NANPQ8TBE9 248 aa12.07□□□□□ -0.48
PNKP-221ENST00000627317 MRGPRDQ8TDS7 321 aa12.07□□□□□ -0.48
PNKP-221ENST00000627317 TBX15Q96SF7 602 aa12.07□□□□□ -0.48
PNKP-221ENST00000627317 FAAP24Q9BTP7 215 aa12.07□□□□□ -0.48
PNKP-221ENST00000627317 PECRQ9BY49 303 aa12.07□□□□□ -0.48
PNKP-221ENST00000627317 CHMP1AQ9HD42 196 aaPredicted RBP12.07□□□□□ -0.48
PNKP-221ENST00000627317 SIRT7Q9NRC8 400 aa12.07□□□□□ -0.48
PNKP-221ENST00000627317 CCDC59Q9P031 241 aaKnown RBP12.07□□□□□ -0.48
PNKP-221ENST00000627317 COMMD3Q9UBI1 195 aa12.07□□□□□ -0.48
PNKP-221ENST00000627317 A0A075B6Q4 140 aa12.06□□□□□ -0.48
PNKP-221ENST00000627317 TRAV40A0A0B4J280 105 aa12.06□□□□□ -0.48
PNKP-221ENST00000627317 ZNF729A6NN14 1252 aaPredicted RBP12.06□□□□□ -0.48
PNKP-221ENST00000627317 ZNF701M0R085 212 aaPredicted RBP12.06□□□□□ -0.48
PNKP-221ENST00000627317 RAB27BO00194 218 aa12.06□□□□□ -0.48
PNKP-221ENST00000627317 TCF21O43680 179 aa12.06□□□□□ -0.48
PNKP-221ENST00000627317 CLPXO76031 633 aa12.06□□□□□ -0.48
PNKP-221ENST00000627317 RBP4P02753 201 aa12.06□□□□□ -0.48
PNKP-221ENST00000627317 MT-ND4P03905 459 aa12.06□□□□□ -0.48
PNKP-221ENST00000627317 HIST1H1DP16402 221 aaKnown RBP12.06□□□□□ -0.48
PNKP-221ENST00000627317 EPHA1P21709 976 aa12.06□□□□□ -0.48
PNKP-221ENST00000627317 DLX6P56179 175 aa12.06□□□□□ -0.48
PNKP-221ENST00000627317 TMEM50BP56557 158 aa12.06□□□□□ -0.48
PNKP-221ENST00000627317 ERVFRD-1P60508 538 aa12.06□□□□□ -0.48
PNKP-221ENST00000627317 MRPS15P82914 257 aaKnown RBP12.06□□□□□ -0.48
PNKP-221ENST00000627317 DYNC1I2Q13409 638 aaKnown RBP12.06□□□□□ -0.48
PNKP-221ENST00000627317 KIAA2026Q5HYC2 2103 aa12.06□□□□□ -0.48
PNKP-221ENST00000627317 GPR157Q5UAW9 335 aa12.06□□□□□ -0.48
PNKP-221ENST00000627317 NCR3LG1Q68D85 454 aa12.06□□□□□ -0.48
PNKP-221ENST00000627317 Q8N7P7 452 aa12.06□□□□□ -0.48
PNKP-221ENST00000627317 ZNF565Q8N9K5 539 aa12.06□□□□□ -0.48
PNKP-221ENST00000627317 OR13A1Q8NGR1 328 aa12.06□□□□□ -0.48
PNKP-221ENST00000627317 OR4K15Q8NH41 348 aa12.06□□□□□ -0.48
PNKP-221ENST00000627317 CCDC107Q8WV48 283 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms