RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 ISG15P05161 165 aa9.98□□□□□ -0.81
LINC00538-201ENST00000626109 CD37P11049 281 aa9.98□□□□□ -0.81
LINC00538-201ENST00000626109 GABRA1P14867 456 aa9.98□□□□□ -0.81
LINC00538-201ENST00000626109 AGTR1P30556 359 aa9.98□□□□□ -0.81
LINC00538-201ENST00000626109 CDAP32320 146 aa9.98□□□□□ -0.81
LINC00538-201ENST00000626109 EFNB2P52799 333 aa9.98□□□□□ -0.81
LINC00538-201ENST00000626109 DEFA6Q01524 100 aa9.98□□□□□ -0.81
LINC00538-201ENST00000626109 ZP4Q12836 540 aa9.98□□□□□ -0.81
LINC00538-201ENST00000626109 C1QL3Q5VWW1 255 aa9.98□□□□□ -0.81
LINC00538-201ENST00000626109 BTNL8Q6UX41 500 aa9.98□□□□□ -0.81
LINC00538-201ENST00000626109 TMUB2Q71RG4 321 aa9.98□□□□□ -0.81
LINC00538-201ENST00000626109 ZNF627Q7L945 461 aa9.98□□□□□ -0.81
LINC00538-201ENST00000626109 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.98□□□□□ -0.81
LINC00538-201ENST00000626109 SARAFQ96BY9 339 aa9.98□□□□□ -0.81
LINC00538-201ENST00000626109 SLC25A44Q96H78 314 aaPredicted RBP9.98□□□□□ -0.81
LINC00538-201ENST00000626109 PFDN5Q99471 154 aa9.98□□□□□ -0.81
LINC00538-201ENST00000626109 OR11A1Q9GZK7 315 aa9.98□□□□□ -0.81
LINC00538-201ENST00000626109 SPRR3Q9UBC9 169 aa9.98□□□□□ -0.81
LINC00538-201ENST00000626109 ING1Q9UK53 422 aaPredicted RBP9.98□□□□□ -0.81
LINC00538-201ENST00000626109 A0A087X0K7 114 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 TMEM213A2RRL7 107 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 H3BSH0 61 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 TMPRSS2O15393 492 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 CTLA4P16410 223 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 IGFBP3P17936 291 aaPredicted RBP9.97□□□□□ -0.81
LINC00538-201ENST00000626109 LHX2P50458 406 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 HSF1Q00613 529 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 AESQ08117 197 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 PLA2G7Q13093 441 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 BSXQ3C1V8 233 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 TMEM176BQ3YBM2 270 aaPredicted RBP9.97□□□□□ -0.81
LINC00538-201ENST00000626109 GLYATL3Q5SZD4 288 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 ACSM6Q6P461 480 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 C17orf107Q6ZR85 190 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 CHMP1BQ7LBR1 199 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 ADGRE4PQ86SQ3 457 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 TGIF2LXQ8IUE1 241 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 MUC20Q8N307 709 aaPredicted RBP9.97□□□□□ -0.81
LINC00538-201ENST00000626109 OR1L6Q8NGR2 347 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 OR8S1Q8NH09 359 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 MSI2Q96DH6 328 aaKnown RBP9.97□□□□□ -0.81
LINC00538-201ENST00000626109 GAR1Q9NY12 217 aaKnown RBP9.97□□□□□ -0.81
LINC00538-201ENST00000626109 HDGFL3Q9Y3E1 203 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 DSPP15924 2871 aaKnown RBP9.97□□□□□ -0.81
LINC00538-201ENST00000626109 PCNX3Q9H6A9 2034 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 ZZEF1O43149 2961 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 FXYD6-FXYD2A0A087WZ82 144 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 TMEM82A0PJX8 343 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 DISC1C4P0D8 188 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 SCGNO76038 276 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 CD5P06127 495 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 FAHP16930 419 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 ZNF708P17019 499 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 RAB6AP20340 208 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 IER3P46695 156 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 TDGF1P3P51864 188 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 MEF2DQ14814 521 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 LPCAT3Q6P1A2 487 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 MFSD8Q8NHS3 518 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 ARL6Q9H0F7 186 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 FXYD6Q9H0Q3 95 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 ZFAND3Q9H8U3 227 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 TAS2R4Q9NYW5 299 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 OR52A1Q9UKL2 312 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 RAB22AQ9UL26 194 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 PSG11Q9UQ72 335 aa9.97□□□□□ -0.81
LINC00538-201ENST00000626109 COA3Q9Y2R0 106 aaPredicted RBP9.97□□□□□ -0.81
LINC00538-201ENST00000626109 CACNA1BQ00975 2339 aa9.96□□□□□ -0.81
LINC00538-201ENST00000626109 ZNF736B4DX44 427 aaPredicted RBP9.96□□□□□ -0.81
LINC00538-201ENST00000626109 NPIPA3F8WFD2 350 aa9.96□□□□□ -0.81
LINC00538-201ENST00000626109 WISP2O76076 250 aa9.96□□□□□ -0.81
LINC00538-201ENST00000626109 CYB5R3P00387 301 aaPredicted RBP9.96□□□□□ -0.81
LINC00538-201ENST00000626109 IFNA21P01568 189 aa9.96□□□□□ -0.81
LINC00538-201ENST00000626109 GAPDHP04406 335 aaKnown RBP9.96□□□□□ -0.81
LINC00538-201ENST00000626109 VPREB1P12018 145 aa9.96□□□□□ -0.81
LINC00538-201ENST00000626109 ZNF35P13682 527 aa9.96□□□□□ -0.81
LINC00538-201ENST00000626109 CLDN18P56856 261 aa9.96□□□□□ -0.81
LINC00538-201ENST00000626109 BLOC1S1P78537 153 aa9.96□□□□□ -0.81
LINC00538-201ENST00000626109 SORDQ00796 357 aa9.96□□□□□ -0.81
LINC00538-201ENST00000626109 SRYQ05066 204 aa9.96□□□□□ -0.81
LINC00538-201ENST00000626109 SRSF1Q07955 248 aaKnown RBP eCLIP9.96□□□□□ -0.81
LINC00538-201ENST00000626109 MYBPHQ13203 477 aa9.96□□□□□ -0.81
LINC00538-201ENST00000626109 GSG1LQ6UXU4 331 aa9.96□□□□□ -0.81
LINC00538-201ENST00000626109 GFRALQ6UXV0 394 aa9.96□□□□□ -0.81
LINC00538-201ENST00000626109 LYG2Q86SG7 212 aa9.96□□□□□ -0.81
LINC00538-201ENST00000626109 GGNQ86UU5 652 aa9.96□□□□□ -0.81
LINC00538-201ENST00000626109 C12orf45Q8N5I9 185 aaPredicted RBP9.96□□□□□ -0.81
LINC00538-201ENST00000626109 C2CD4CQ8TF44 421 aa9.96□□□□□ -0.81
LINC00538-201ENST00000626109 TMEM171Q8WVE6 324 aa9.96□□□□□ -0.81
LINC00538-201ENST00000626109 SEH1LQ96EE3 360 aa9.96□□□□□ -0.81
LINC00538-201ENST00000626109 FANCD2OSQ96PS1 177 aa9.96□□□□□ -0.81
LINC00538-201ENST00000626109 PPA2Q9H2U2 334 aa9.96□□□□□ -0.81
LINC00538-201ENST00000626109 SMPXQ9UHP9 88 aa9.96□□□□□ -0.81
LINC00538-201ENST00000626109 A0A0J9YW62 118 aa9.95□□□□□ -0.82
LINC00538-201ENST00000626109 TMEM269A0A1B0GVZ9 245 aa9.95□□□□□ -0.82
LINC00538-201ENST00000626109 KRBOX1C9JBD0 128 aa9.95□□□□□ -0.82
LINC00538-201ENST00000626109 SULT2B1O00204 365 aa9.95□□□□□ -0.82
LINC00538-201ENST00000626109 TNFSF11O14788 317 aa9.95□□□□□ -0.82
LINC00538-201ENST00000626109 H2BFMP0C1H6 154 aa9.95□□□□□ -0.82
LINC00538-201ENST00000626109 ABOP16442 354 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms