RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 HYLS1Q96M11 299 aa18.04■□□□□ 0.48
SPAST-204ENST00000621856 TRAF4Q9BUZ4 470 aaPredicted RBP18.04■□□□□ 0.48
SPAST-204ENST00000621856 DECR2Q9NUI1 292 aa18.04■□□□□ 0.48
SPAST-204ENST00000621856 ICE1Q9Y2F5 2266 aa18.04■□□□□ 0.48
SPAST-204ENST00000621856 TUBAL3A6NHL2 446 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 E7EQL1 145 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 SFT2D2O95562 160 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 DIRAS3O95661 229 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 TLE1Q04724 770 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 SLC9A3R2Q15599 337 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 OR4A4PQ8NGN8 299 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 NEUROG1Q92886 237 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 PIPOXQ9P0Z9 390 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 RNF7Q9UBF6 113 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 MGAT4AQ9UM21 535 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 IGHV3OR15-7A0A075B7D8 119 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 TRAV39A0A0B4J263 110 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 TMEM30CPA0ZSE6 113 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 C17orf100A8MU93 164 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 M0R233 179 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 OR2A4O95047 310 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 PPYP01298 95 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 DNASE1P24855 282 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 PRDX2P32119 198 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 HERPUD1Q15011 391 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 ABCA11PQ4W5N1 156 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 BEX5Q5H9J7 111 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 KCTD9Q7L273 389 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 GAPTQ8N292 157 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 ASCC1Q8N9N2 400 aaKnown RBP18.03■□□□□ 0.48
SPAST-204ENST00000621856 OR11L1Q8NGX0 322 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 OR2A7Q96R45 310 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 GCM1Q9NP62 436 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 METRNQ9UJH8 293 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 RNF115Q9Y4L5 304 aa18.03■□□□□ 0.48
SPAST-204ENST00000621856 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.02■□□□□ 0.48
SPAST-204ENST00000621856 PSG2P11465 335 aa18.02■□□□□ 0.48
SPAST-204ENST00000621856 GNLYP22749 145 aa18.02■□□□□ 0.48
SPAST-204ENST00000621856 GABRA2P47869 451 aa18.02■□□□□ 0.48
SPAST-204ENST00000621856 H2BFSP57053 126 aa18.02■□□□□ 0.48
SPAST-204ENST00000621856 DCAF12L2Q5VW00 463 aa18.02■□□□□ 0.48
SPAST-204ENST00000621856 CLEC18BQ6UXF7 455 aa18.02■□□□□ 0.48
SPAST-204ENST00000621856 CD177Q8N6Q3 437 aa18.02■□□□□ 0.48
SPAST-204ENST00000621856 ERGIC1Q969X5 290 aa18.02■□□□□ 0.48
SPAST-204ENST00000621856 DIDO1Q9BTC0 2240 aaKnown RBP18.02■□□□□ 0.47
SPAST-204ENST00000621856 NBASA2RRP1 2371 aa18.01■□□□□ 0.47
SPAST-204ENST00000621856 IGKV1-6A0A0C4DH72 117 aa18.01■□□□□ 0.47
SPAST-204ENST00000621856 CD80P33681 288 aa18.01■□□□□ 0.47
SPAST-204ENST00000621856 OR3A1P47881 315 aa18.01■□□□□ 0.47
SPAST-204ENST00000621856 UQCRFS1P47985 274 aa18.01■□□□□ 0.47
SPAST-204ENST00000621856 KCNJ3P48549 501 aa18.01■□□□□ 0.47
SPAST-204ENST00000621856 UCP3P55916 312 aa18.01■□□□□ 0.47
SPAST-204ENST00000621856 SLC38A6Q8IZM9 456 aa18.01■□□□□ 0.47
SPAST-204ENST00000621856 TEX13DA0A0J9YY54 714 aaPredicted RBP18.01■□□□□ 0.47
SPAST-204ENST00000621856 LHBP01229 141 aa18.01■□□□□ 0.47
SPAST-204ENST00000621856 CD55P08174 381 aa18.01■□□□□ 0.47
SPAST-204ENST00000621856 ADH4P08319 380 aa18.01■□□□□ 0.47
SPAST-204ENST00000621856 IRF2P14316 349 aa18.01■□□□□ 0.47
SPAST-204ENST00000621856 TNFRSF1AP19438 455 aa18.01■□□□□ 0.47
SPAST-204ENST00000621856 SUPT4H1P63272 117 aaKnown RBP18.01■□□□□ 0.47
SPAST-204ENST00000621856 CCL8P80075 99 aa18.01■□□□□ 0.47
SPAST-204ENST00000621856 C4orf17Q53FE4 359 aa18.01■□□□□ 0.47
SPAST-204ENST00000621856 SLC35E4Q6ICL7 350 aa18.01■□□□□ 0.47
SPAST-204ENST00000621856 SGPP2Q8IWX5 399 aa18.01■□□□□ 0.47
SPAST-204ENST00000621856 COQ8AQ8NI60 647 aa18.01■□□□□ 0.47
SPAST-204ENST00000621856 WDR89Q96FK6 387 aaPredicted RBP18.01■□□□□ 0.47
SPAST-204ENST00000621856 KIRREL1Q96J84 757 aa18.01■□□□□ 0.47
SPAST-204ENST00000621856 DYNLRB1Q9NP97 96 aa18.01■□□□□ 0.47
SPAST-204ENST00000621856 PCDHB10Q9UN67 800 aa18.01■□□□□ 0.47
SPAST-204ENST00000621856 PPP1R3CQ9UQK1 317 aa18.01■□□□□ 0.47
SPAST-204ENST00000621856 CCSO14618 274 aa18■□□□□ 0.47
SPAST-204ENST00000621856 PLAUP00749 431 aa18■□□□□ 0.47
SPAST-204ENST00000621856 APOBEC3AP31941 199 aaPredicted RBP18■□□□□ 0.47
SPAST-204ENST00000621856 PIGPP57054 158 aa18■□□□□ 0.47
SPAST-204ENST00000621856 AESQ08117 197 aa18■□□□□ 0.47
SPAST-204ENST00000621856 TESK1Q15569 626 aa18■□□□□ 0.47
SPAST-204ENST00000621856 LPCAT3Q6P1A2 487 aa18■□□□□ 0.47
SPAST-204ENST00000621856 PRR18Q8N4B5 295 aa18■□□□□ 0.47
SPAST-204ENST00000621856 GALNT11Q8NCW6 608 aa18■□□□□ 0.47
SPAST-204ENST00000621856 OR5M8Q8NGP6 311 aa18■□□□□ 0.47
SPAST-204ENST00000621856 OR10J5Q8NHC4 309 aa18■□□□□ 0.47
SPAST-204ENST00000621856 IL1F10Q8WWZ1 152 aa18■□□□□ 0.47
SPAST-204ENST00000621856 PIK3IP1Q96FE7 263 aa18■□□□□ 0.47
SPAST-204ENST00000621856 CABLES2Q9BTV7 478 aa18■□□□□ 0.47
SPAST-204ENST00000621856 MBNL3Q9NUK0 354 aaKnown RBP18■□□□□ 0.47
SPAST-204ENST00000621856 KCNIP1Q9NZI2 227 aa18■□□□□ 0.47
SPAST-204ENST00000621856 KIF25Q9UIL4 384 aa18■□□□□ 0.47
SPAST-204ENST00000621856 BOLA1Q9Y3E2 137 aa18■□□□□ 0.47
SPAST-204ENST00000621856 IGKV1D-17A0A075B6S4 117 aa17.99■□□□□ 0.47
SPAST-204ENST00000621856 CYB5R3P00387 301 aaPredicted RBP17.99■□□□□ 0.47
SPAST-204ENST00000621856 RPS2P15880 293 aaKnown RBP17.99■□□□□ 0.47
SPAST-204ENST00000621856 PHLDA2Q53GA4 152 aa17.99■□□□□ 0.47
SPAST-204ENST00000621856 LY6G6FQ5SQ64 297 aa17.99■□□□□ 0.47
SPAST-204ENST00000621856 ZCCHC24Q8N2G6 241 aaKnown RBP17.99■□□□□ 0.47
SPAST-204ENST00000621856 ZNF565Q8N9K5 539 aa17.99■□□□□ 0.47
SPAST-204ENST00000621856 Q8TCH9 128 aa17.99■□□□□ 0.47
SPAST-204ENST00000621856 ASB13Q8WXK3 278 aa17.99■□□□□ 0.47
SPAST-204ENST00000621856 PDCD10Q9BUL8 212 aa17.99■□□□□ 0.47
SPAST-204ENST00000621856 EGLN1Q9GZT9 426 aa17.99■□□□□ 0.47
SPAST-204ENST00000621856 OPN4Q9UHM6 478 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms